RNA–Protein interactions for RNA: ENST00000225576.7

TVP23C-201, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 1 (best) BASIC

Gene TVP23C, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-201ENST00000225576 LILRB3O75022 631 aa17.35■□□□□ 0.37
TVP23C-201ENST00000225576 FGF18O76093 207 aa17.35■□□□□ 0.37
TVP23C-201ENST00000225576 SEC24AO95486 1093 aa17.35■□□□□ 0.37
TVP23C-201ENST00000225576 RBL1P28749 1068 aa17.35■□□□□ 0.37
TVP23C-201ENST00000225576 RNASEH2BQ5TBB1 312 aaKnown RBP17.35■□□□□ 0.37
TVP23C-201ENST00000225576 C4orf22Q6V702 233 aa17.35■□□□□ 0.37
TVP23C-201ENST00000225576 PHOSPHO2Q8TCD6 241 aa17.35■□□□□ 0.37
TVP23C-201ENST00000225576 QKIQ96PU8 341 aaKnown RBP eCLIP17.35■□□□□ 0.374e-14■■■■■ 30.2
TVP23C-201ENST00000225576 RUFY1Q96T51 708 aa17.35■□□□□ 0.37
TVP23C-201ENST00000225576 ZBED2Q9BTP6 218 aa17.35■□□□□ 0.37
TVP23C-201ENST00000225576 CXXC1Q9P0U4 656 aaPredicted RBP17.35■□□□□ 0.37
TVP23C-201ENST00000225576 NUDT5Q9UKK9 219 aa17.35■□□□□ 0.37
TVP23C-201ENST00000225576 SHOC2Q9UQ13 582 aa17.35■□□□□ 0.37
TVP23C-201ENST00000225576 H3BQF6 201 aa17.34■□□□□ 0.37
TVP23C-201ENST00000225576 KCNN4O15554 427 aa17.34■□□□□ 0.37
TVP23C-201ENST00000225576 MFSD11O43934 449 aa17.34■□□□□ 0.37
TVP23C-201ENST00000225576 OPA1O60313 960 aa17.34■□□□□ 0.37
TVP23C-201ENST00000225576 PAGE1O75459 146 aa17.34■□□□□ 0.37
TVP23C-201ENST00000225576 ZNF189O75820 626 aaPredicted RBP17.34■□□□□ 0.37
TVP23C-201ENST00000225576 LRIG2O94898 1065 aa17.34■□□□□ 0.37
TVP23C-201ENST00000225576 SYF2O95926 243 aaKnown RBP17.34■□□□□ 0.37
TVP23C-201ENST00000225576 CSH1P0DML2 217 aa17.34■□□□□ 0.37
TVP23C-201ENST00000225576 CSH2P0DML3 217 aa17.34■□□□□ 0.37
TVP23C-201ENST00000225576 ACTN2P35609 894 aa17.34■□□□□ 0.37
TVP23C-201ENST00000225576 NRG1Q02297 640 aaPredicted RBP17.34■□□□□ 0.37
TVP23C-201ENST00000225576 PDK1Q15118 436 aa17.34■□□□□ 0.37
TVP23C-201ENST00000225576 SNX30Q5VWJ9 437 aa17.34■□□□□ 0.37
TVP23C-201ENST00000225576 TRMT10CQ7L0Y3 403 aaKnown RBP17.34■□□□□ 0.37
TVP23C-201ENST00000225576 HOOK3Q86VS8 718 aa17.34■□□□□ 0.37
TVP23C-201ENST00000225576 RELL1Q8IUW5 271 aa17.34■□□□□ 0.37
TVP23C-201ENST00000225576 PPIL6Q8IXY8 311 aa17.34■□□□□ 0.37
TVP23C-201ENST00000225576 C7orf61Q8IZ16 206 aa17.34■□□□□ 0.37
TVP23C-201ENST00000225576 ZCCHC9Q8N567 271 aaKnown RBP17.34■□□□□ 0.37
TVP23C-201ENST00000225576 PDZD8Q8NEN9 1154 aa17.34■□□□□ 0.37
TVP23C-201ENST00000225576 SP7Q8TDD2 431 aaPredicted RBP17.34■□□□□ 0.37
TVP23C-201ENST00000225576 TFB1MQ8WVM0 346 aaKnown RBP17.34■□□□□ 0.37
TVP23C-201ENST00000225576 C1orf74Q96LT6 269 aa17.34■□□□□ 0.37
TVP23C-201ENST00000225576 CDK5RAP1Q96SZ6 601 aaKnown RBP17.34■□□□□ 0.37
TVP23C-201ENST00000225576 RAD9AQ99638 391 aa17.34■□□□□ 0.37
TVP23C-201ENST00000225576 SH3GL2Q99962 352 aa17.34■□□□□ 0.37
TVP23C-201ENST00000225576 CYP4F11Q9HBI6 524 aa17.34■□□□□ 0.37
TVP23C-201ENST00000225576 RXFP1Q9HBX9 757 aa17.34■□□□□ 0.37
TVP23C-201ENST00000225576 PAK5Q9P286 719 aa17.34■□□□□ 0.37
TVP23C-201ENST00000225576 PLAAQ9Y263 795 aa17.34■□□□□ 0.37
TVP23C-201ENST00000225576 MFHAS1Q9Y4C4 1052 aa17.34■□□□□ 0.37
TVP23C-201ENST00000225576 FARP1Q9Y4F1 1045 aaPredicted RBP17.34■□□□□ 0.37
TVP23C-201ENST00000225576 H0YGN5 161 aa17.33■□□□□ 0.37
TVP23C-201ENST00000225576 NCAM2O15394 837 aa17.33■□□□□ 0.37
TVP23C-201ENST00000225576 MAP3K6O95382 1288 aa17.33■□□□□ 0.37
TVP23C-201ENST00000225576 CTSAP10619 480 aa17.33■□□□□ 0.37
TVP23C-201ENST00000225576 HOXC13P31276 330 aa17.33■□□□□ 0.37
TVP23C-201ENST00000225576 CHKAP35790 457 aa17.33■□□□□ 0.37
TVP23C-201ENST00000225576 ALDH1A3P47895 512 aa17.33■□□□□ 0.37
TVP23C-201ENST00000225576 TBX4P57082 545 aa17.33■□□□□ 0.37
TVP23C-201ENST00000225576 FAM193AP78312 1265 aa17.33■□□□□ 0.37
TVP23C-201ENST00000225576 TRIP4Q15650 581 aaPredicted RBP17.33■□□□□ 0.37
TVP23C-201ENST00000225576 HERC6Q8IVU3 1022 aa17.33■□□□□ 0.37
TVP23C-201ENST00000225576 TCEAL8Q8IYN2 117 aa17.33■□□□□ 0.37
TVP23C-201ENST00000225576 PKNOX2Q96KN3 472 aa17.33■□□□□ 0.37
TVP23C-201ENST00000225576 FCRL2Q96LA5 508 aaPredicted RBP17.33■□□□□ 0.37
TVP23C-201ENST00000225576 MYRFLQ96LU7 910 aa17.33■□□□□ 0.37
TVP23C-201ENST00000225576 ZBP1Q9H171 429 aa17.33■□□□□ 0.37
TVP23C-201ENST00000225576 NFS1Q9Y697 457 aa17.33■□□□□ 0.37
TVP23C-201ENST00000225576 SLC4A7Q9Y6M7 1214 aa17.33■□□□□ 0.37
TVP23C-201ENST00000225576 GCATO75600 419 aa17.32■□□□□ 0.36
TVP23C-201ENST00000225576 HMGA1P17096 107 aaKnown RBP17.32■□□□□ 0.36
TVP23C-201ENST00000225576 EPHB2P29323 1055 aa17.32■□□□□ 0.36
TVP23C-201ENST00000225576 OAS2P29728 719 aaKnown RBP17.32■□□□□ 0.36
TVP23C-201ENST00000225576 MLLT6P55198 1093 aaPredicted RBP17.32■□□□□ 0.36
TVP23C-201ENST00000225576 EFEMP1Q12805 493 aa17.32■□□□□ 0.36
TVP23C-201ENST00000225576 MTA1Q13330 715 aa17.32■□□□□ 0.36
TVP23C-201ENST00000225576 C10orf120Q5SQS8 335 aa17.32■□□□□ 0.36
TVP23C-201ENST00000225576 MANEALQ5VSG8 457 aa17.32■□□□□ 0.36
TVP23C-201ENST00000225576 B4GALNT4Q76KP1 1039 aa17.32■□□□□ 0.36
TVP23C-201ENST00000225576 CCDC25Q86WR0 208 aa17.32■□□□□ 0.36
TVP23C-201ENST00000225576 NAT8LQ8N9F0 302 aa17.32■□□□□ 0.36
TVP23C-201ENST00000225576 CPT1BQ92523 772 aa17.32■□□□□ 0.36
TVP23C-201ENST00000225576 PRCCQ92733 491 aaPredicted RBP17.32■□□□□ 0.36
TVP23C-201ENST00000225576 BRD8Q9H0E9 1235 aa17.32■□□□□ 0.36
TVP23C-201ENST00000225576 EPB41L4BQ9H329 900 aa17.32■□□□□ 0.36
TVP23C-201ENST00000225576 SEMA4AQ9H3S1 761 aa17.32■□□□□ 0.36
TVP23C-201ENST00000225576 MARCH2Q9P0N8 246 aa17.32■□□□□ 0.36
TVP23C-201ENST00000225576 MAGED2Q9UNF1 606 aaPredicted RBP17.32■□□□□ 0.36
TVP23C-201ENST00000225576 YIPF1Q9Y548 306 aa17.32■□□□□ 0.36
TVP23C-201ENST00000225576 SNX10Q9Y5X0 201 aa17.32■□□□□ 0.36
TVP23C-201ENST00000225576 C5orf60A6NFR6 353 aa17.31■□□□□ 0.36
TVP23C-201ENST00000225576 PPP1R12AO14974 1030 aaPredicted RBP17.31■□□□□ 0.36
TVP23C-201ENST00000225576 APOEP02649 317 aa17.31■□□□□ 0.36
TVP23C-201ENST00000225576 NUDT17P0C025 328 aa17.31■□□□□ 0.36
TVP23C-201ENST00000225576 DNAJB2P25686 324 aa17.31■□□□□ 0.36
TVP23C-201ENST00000225576 ELF1P32519 619 aa17.31■□□□□ 0.36
TVP23C-201ENST00000225576 SERPINB6P35237 376 aa17.31■□□□□ 0.36
TVP23C-201ENST00000225576 KPNA1P52294 538 aaPredicted RBP17.31■□□□□ 0.36
TVP23C-201ENST00000225576 EIF3BP55884 814 aaKnown RBP17.31■□□□□ 0.36
TVP23C-201ENST00000225576 RING1Q06587 406 aa17.31■□□□□ 0.36
TVP23C-201ENST00000225576 PRKD1Q15139 912 aaPredicted RBP17.31■□□□□ 0.36
TVP23C-201ENST00000225576 ACBD5Q5T8D3 534 aaPredicted RBP17.31■□□□□ 0.36
TVP23C-201ENST00000225576 HEATR6Q6AI08 1181 aaKnown RBP17.31■□□□□ 0.36
TVP23C-201ENST00000225576 TADA2BQ86TJ2 420 aa17.31■□□□□ 0.36
TVP23C-201ENST00000225576 HTR3CQ8WXA8 447 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms