RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Ssxb9A2BI93 185 aa14.29□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Tnk2O54967 1055 aa14.29□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Nfkb1P25799 971 aa14.29□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Epb41P48193 858 aa14.29□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Defa8P50706 81 aa14.29□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Prkaa2Q8BRK8 552 aa14.29□□□□□ -0.12
Col3a1-201ENSMUST00000087883 WwoxQ91WL8 414 aa14.29□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Senp2Q91ZX6 588 aa14.29□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Nipsnap3aB1AWZ3 247 aa14.29□□□□□ -0.12
Col3a1-201ENSMUST00000087883 RxrgP28705 463 aa14.29□□□□□ -0.12
Col3a1-201ENSMUST00000087883 NrlP54846 237 aa14.29□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Zfyve28Q6ZPK7 905 aa14.29□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Kcnt1Q6ZPR4 1224 aa14.29□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Samd4bQ80XS6 687 aa14.29□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Tarsl2Q8BLY2 790 aa14.29□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Adam32Q8K410 754 aa14.29□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Ninj2Q9JL89 143 aa14.29□□□□□ -0.12
Col3a1-201ENSMUST00000087883 TsnQ62348 228 aaKnown RBP14.29□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Scaf8Q6DID3 1268 aa14.29□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Olfr293Q7TS10 336 aa14.29□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Mib1Q80SY4 1006 aa14.29□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Mis18bp1Q80WQ8 998 aa14.29□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Spata20Q80YT5 790 aa14.29□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Trim50Q810I2 483 aa14.29□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Sh3glb2Q8R3V5 400 aa14.29□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Adck1Q9D0L4 525 aa14.29□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Dyrk1bQ9Z188 629 aa14.29□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Abca8bQ8K440 1620 aa14.29□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Znf804aA2AKY4 1200 aa14.28□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Syndig1A2ANU3 258 aa14.28□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Cyp2c69E9PXC3 491 aa14.28□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Kbtbd2G3X9X1 623 aa14.28□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Vmn2r4K7N784 913 aa14.28□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Magea1O89006 320 aa14.28□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Magea5O89009 320 aa14.28□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Nr2c2P49117 596 aa14.28□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Cyp2c40P56657 491 aa14.28□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Lad1P57016 528 aa14.28□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Tlr8P58682 1032 aa14.28□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Tbc1d13Q8R3D1 400 aa14.28□□□□□ -0.12
Col3a1-201ENSMUST00000087883 AenQ9CZI9 336 aaKnown RBP14.28□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Magea2Q9R2A2 320 aa14.28□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Zfyve16Q80U44 1528 aa14.28□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Arhgap33Q80YF9 1305 aa14.28□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Htr3aP23979 487 aa14.28□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Grin2cQ01098 1239 aa14.28□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Nudt18Q3U2V3 323 aa14.28□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Adora2bQ60614 332 aa14.28□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Cand2Q6ZQ73 1235 aa14.28□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Gpr151Q7TSN6 422 aa14.28□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Dhx32Q8BZS9 744 aa14.28□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Pkn3Q8K045 878 aa14.28□□□□□ -0.12
Col3a1-201ENSMUST00000087883 IlkapQ8R0F6 392 aa14.28□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Olfr693Q8VF89 316 aa14.28□□□□□ -0.12
Col3a1-201ENSMUST00000087883 CoprsQ9CQ13 173 aa14.28□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Ttc30bQ9CY00 664 aa14.28□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Sv2aQ9JIS5 742 aa14.28□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Grk1Q9WVL4 564 aa14.28□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Ttc23lA6H6E9 458 aa14.28□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Unc5cO08747 931 aa14.28□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Adam7O35227 789 aa14.28□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Il27raO70394 623 aa14.28□□□□□ -0.12
Col3a1-201ENSMUST00000087883 AmhP27106 555 aa14.28□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Ptpn11P35235 597 aa14.28□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Gprin1Q3UNH4 932 aa14.28□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Nr1h2Q60644 446 aa14.28□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Bcar1Q61140 874 aa14.28□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Pick1Q62083 416 aa14.28□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Znf280cQ6P3Y5 742 aa14.28□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Ubxn7Q6P5G6 467 aa14.28□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Ptrh1Q8BW00 204 aa14.28□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Coq6Q8R1S0 476 aa14.28□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Slc30a5Q8R4H9 761 aa14.28□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Pkp2Q9CQ73 795 aaKnown RBP14.28□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Kcnh4A2A5F7 1018 aa14.28□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Grik3B1AS29 919 aa14.28□□□□□ -0.12
Col3a1-201ENSMUST00000087883 MndalD0QMC3 538 aaKnown RBP14.28□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Gm7694J3QNH8 270 aa14.28□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Rpl21O09167 160 aaKnown RBP14.28□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Sema6aO35464 1031 aa14.28□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Gga2Q6P5E6 603 aa14.28□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Prl7b1Q8CGZ9 251 aa14.28□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Txndc5Q91W90 417 aa14.28□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Fam45aQ9D8N2 357 aa14.28□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Prl2c2P04095 224 aa14.28□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Gbx2P48031 348 aa14.28□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Ak8Q32M07 479 aa14.28□□□□□ -0.12
Col3a1-201ENSMUST00000087883 D630036H23RikQ3UQD6 204 aa14.28□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Fnip1Q68FD7 1165 aa14.28□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Olfr1057Q7TR75 315 aa14.28□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Prmt7Q922X9 692 aa14.28□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Q9CQF4 240 aa14.28□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Atg7Q9D906 698 aa14.28□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Ehd3Q9QXY6 535 aa14.28□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Smok3aC0HKC8 504 aa14.27□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Smok3bC0HKC9 504 aa14.27□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Pik3r5Q5SW28 871 aa14.27□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Olfr169Q7TS53 313 aa14.27□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Brat1Q8C3R1 822 aa14.27□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Tmc7Q8C428 726 aa14.27□□□□□ -0.12
Retrieved 100 of 22,080 RNA–protein pairs in 33.7 ms