RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Eif2b5Q8CHW4 717 aa19.26■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Dedd2Q8QZV0 330 aa19.26■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Ndufa10Q99LC3 355 aaKnown RBP19.26■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Ndufaf1Q9CWX2 328 aa19.26■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Pgam1Q9DBJ1 254 aa19.26■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Tubd1Q9R1K7 455 aa19.26■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Tmem115Q9WUH1 350 aa19.26■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Kifc5bE9PUA5 672 aa19.26■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Adam15O88839 864 aa19.26■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Cd2P08920 344 aa19.26■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Meaf6Q2VPQ9 191 aa19.26■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 E330034G19RikQ3UWX6 351 aa19.26■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Gjd4Q8BSD4 364 aa19.26■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Bmt2Q8BXK4 403 aa19.26■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Prmt7Q922X9 692 aa19.26■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 4933428M09RikQ9D3X3 192 aa19.26■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Ap2b1Q9DBG3 937 aa19.26■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Acox2Q9QXD1 681 aa19.26■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Gm15155B1B034 138 aa19.25■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Syngr1O55100 234 aa19.25■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Kcna3P16390 528 aa19.25■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Pde6bP23440 856 aa19.25■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Tfap2aP34056 437 aa19.25■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Matn1P51942 500 aaKnown RBP19.25■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Arl4aP61213 200 aa19.25■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Zfp658Q5PPQ4 887 aa19.25■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 PkdccQ5RJI4 492 aa19.25■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 PigaQ64323 485 aa19.25■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Atp2a3Q64518 1038 aa19.25■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Papd5Q68ED3 633 aaKnown RBP19.25■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Mis18bp1Q80WQ8 998 aa19.25■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Q8CIL4 281 aa19.25■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Pcdha1Q91Y21 948 aa19.25■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Necab2Q91ZP9 389 aa19.25■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Trim7Q923T7 510 aa19.25■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Ndc80Q9D0F1 642 aaKnown RBP19.25■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 TtpalQ9D3D0 343 aa19.25■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Serpinb9bQ9DAV6 377 aa19.25■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Rasgrp2Q9QUG9 608 aa19.25■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Smok3cA0A087WSF2 504 aa19.25■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Arhgef26D3YYY8 869 aa19.25■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 SprtnG3X912 497 aa19.25■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 PtgisO35074 501 aa19.25■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 ItgalP24063 1163 aa19.25■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Ccnd3P30282 292 aa19.25■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Smad1P70340 465 aa19.25■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Sox8Q04886 464 aa19.25■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 RnaselQ05921 735 aa19.25■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Grid2ipQ0QWG9 1203 aa19.25■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Snx25Q3ZT31 840 aa19.25■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 CybbQ61093 570 aa19.25■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Nomo1Q6GQT9 1214 aaKnown RBP19.25■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Prrt3Q6PE13 971 aa19.25■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 CyldQ80TQ2 952 aa19.25■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Suz12Q80U70 741 aaKnown RBP19.25■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Tbx10Q810F8 385 aa19.25■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Gtf3c4Q8BMQ2 817 aaKnown RBP19.25■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Arhgef33Q8BW86 850 aa19.25■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 TdrpQ8C5P7 182 aa19.25■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Ero1bQ8R2E9 467 aa19.25■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Slc22a19Q8VCA0 551 aa19.25■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 StambpQ9CQ26 424 aa19.25■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Cox16Q9CR63 106 aa19.25■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Thg1lQ9CY52 298 aa19.25■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 4930513O06RikQ9D549 161 aa19.25■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Cpxm1Q9Z100 722 aa19.25■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Ces1bD3Z5G7 567 aa19.24■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Daw1D3Z7A5 415 aa19.24■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Acot1O55137 419 aa19.24■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 PolgP54099 1218 aa19.24■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Il1rapl1P59823 695 aa19.24■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Psmb4P99026 264 aa19.24■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Xlr3aQ60595 226 aa19.24■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Cln3Q61124 438 aa19.24■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Trpv1Q704Y3 839 aa19.24■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Usp1Q8BJQ2 784 aa19.24■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Pwp2Q8BU03 919 aaKnown RBP19.24■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Pyhin1Q8BV49 420 aa19.24■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Afap1l1Q8BZI0 768 aa19.24■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Klhl2Q8JZP3 593 aa19.24■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Zcchc18Q8VD24 393 aa19.24■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 AslQ91YI0 464 aa19.24■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Sytl1Q99N80 567 aa19.24■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 GmprQ9DCZ1 345 aa19.24■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Rassf7Q9DD19 359 aa19.24■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Morc1Q9WVL5 950 aa19.24■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Rpl9-ps1S4R1R7 191 aa19.24■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 UprtB1AVZ0 310 aa19.24■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Adamts6D3Z1A5 1117 aa19.24■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Lmo2P25801 158 aa19.24■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Wnt3aP27467 352 aa19.24■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Ccr5P51682 354 aa19.24■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 TdgP56581 421 aa19.24■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Samd11Q1RNF8 542 aa19.24■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Nxpe4Q52KP5 543 aa19.24■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Thrap3Q569Z6 951 aaKnown RBP19.24■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Trcg1Q58Y74 825 aa19.24■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Ahcyl2Q68FL4 613 aaKnown RBP19.24■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Senp5Q6NXL6 749 aa19.24■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Armc12Q80X86 340 aa19.24■□□□□ 0.67
Retrieved 100 of 22,080 RNA–protein pairs in 42.6 ms