RNA–Protein interactions for RNA: ENST00000625395.1

SEC23A-215, Transcript of Sec23 homolog A, coat complex II component, human

TSL 5 BASIC

Gene SEC23A, Length 261 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC23A-215	ENST00000625395	C5orf34	Q96MH7	638 aa		4.55	□□□□□ -1.68
SEC23A-215	ENST00000625395	MMS19	Q96T76	1030 aa		4.55	□□□□□ -1.68
SEC23A-215	ENST00000625395	FAM118B	Q9BPY3	351 aa		4.55	□□□□□ -1.68
SEC23A-215	ENST00000625395	QTRT1	Q9BXR0	403 aa	Known RBP	4.55	□□□□□ -1.68
SEC23A-215	ENST00000625395	ASIC5	Q9NY37	505 aa		4.55	□□□□□ -1.68
SEC23A-215	ENST00000625395	TUBA8	Q9NY65	449 aa	Predicted RBP	4.55	□□□□□ -1.68
SEC23A-215	ENST00000625395	NKX1-2	Q9UD57	310 aa	Predicted RBP	4.55	□□□□□ -1.68
SEC23A-215	ENST00000625395	DDX20	Q9UHI6	824 aa	Known RBP	4.55	□□□□□ -1.68
SEC23A-215	ENST00000625395	MAFF	Q9ULX9	164 aa		4.55	□□□□□ -1.68
SEC23A-215	ENST00000625395	RGPD3	A6NKT7	1758 aa	Predicted RBP	4.55	□□□□□ -1.68
SEC23A-215	ENST00000625395	RGPD4	Q7Z3J3	1758 aa		4.55	□□□□□ -1.68
SEC23A-215	ENST00000625395	COL24A1	Q17RW2	1714 aa		4.55	□□□□□ -1.68
SEC23A-215	ENST00000625395	LRRC37A3	O60309	1634 aa		4.54	□□□□□ -1.68
SEC23A-215	ENST00000625395	FRMPD2	Q68DX3	1309 aa	Predicted RBP	4.54	□□□□□ -1.68
SEC23A-215	ENST00000625395	VSTM5	A8MXK1	200 aa		4.54	□□□□□ -1.68
SEC23A-215	ENST00000625395	TMEM232	C9JQI7	657 aa		4.54	□□□□□ -1.68
SEC23A-215	ENST00000625395		H7C4K7	107 aa		4.54	□□□□□ -1.68
SEC23A-215	ENST00000625395	SPRY2	O43597	315 aa		4.54	□□□□□ -1.68
SEC23A-215	ENST00000625395	PIAS2	O75928	621 aa		4.54	□□□□□ -1.68
SEC23A-215	ENST00000625395	MMP10	P09238	476 aa		4.54	□□□□□ -1.68
SEC23A-215	ENST00000625395	HSPA8	P11142	646 aa	Known RBP	4.54	□□□□□ -1.68
SEC23A-215	ENST00000625395	CREB1	P16220	341 aa		4.54	□□□□□ -1.68
SEC23A-215	ENST00000625395	TPH1	P17752	444 aa		4.54	□□□□□ -1.68
SEC23A-215	ENST00000625395	IL1R2	P27930	398 aa		4.54	□□□□□ -1.68
SEC23A-215	ENST00000625395	CTCF	P49711	727 aa	Predicted RBP	4.54	□□□□□ -1.68
SEC23A-215	ENST00000625395	DIO1	P49895	249 aa		4.54	□□□□□ -1.68
SEC23A-215	ENST00000625395	PGD	P52209	483 aa		4.54	□□□□□ -1.68
SEC23A-215	ENST00000625395	LMAN2	Q12907	356 aa		4.54	□□□□□ -1.68
SEC23A-215	ENST00000625395	LAMB3	Q13751	1172 aa		4.54	□□□□□ -1.68
SEC23A-215	ENST00000625395	GRM3	Q14832	879 aa		4.54	□□□□□ -1.68
SEC23A-215	ENST00000625395	SUPT20HL1	Q3ZLR7	823 aa		4.54	□□□□□ -1.68
SEC23A-215	ENST00000625395	MIS18BP1	Q6P0N0	1132 aa		4.54	□□□□□ -1.68
SEC23A-215	ENST00000625395	DPY19L3	Q6ZPD9	716 aa		4.54	□□□□□ -1.68
SEC23A-215	ENST00000625395	SESTD1	Q86VW0	696 aa		4.54	□□□□□ -1.68
SEC23A-215	ENST00000625395	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	4.54	□□□□□ -1.68
SEC23A-215	ENST00000625395	STK31	Q9BXU1	1019 aa		4.54	□□□□□ -1.68
SEC23A-215	ENST00000625395	UNK	Q9C0B0	810 aa	Known RBP	4.54	□□□□□ -1.68
SEC23A-215	ENST00000625395	NUP62CL	Q9H1M0	184 aa		4.54	□□□□□ -1.68
SEC23A-215	ENST00000625395	METTL14	Q9HCE5	456 aa	Known RBP	4.54	□□□□□ -1.68
SEC23A-215	ENST00000625395	OBP2A	Q9NY56	170 aa		4.54	□□□□□ -1.68
SEC23A-215	ENST00000625395	MGAT4C	Q9UBM8	478 aa		4.54	□□□□□ -1.68
SEC23A-215	ENST00000625395	HDAC9	Q9UKV0	1011 aa		4.54	□□□□□ -1.68
SEC23A-215	ENST00000625395	KCP	Q6ZWJ8	1503 aa		4.54	□□□□□ -1.68
SEC23A-215	ENST00000625395	TULP4	Q9NRJ4	1543 aa		4.54	□□□□□ -1.68
SEC23A-215	ENST00000625395	PPL	O60437	1756 aa		4.54	□□□□□ -1.68
SEC23A-215	ENST00000625395	PPIP5K1	Q6PFW1	1433 aa		4.54	□□□□□ -1.68
SEC23A-215	ENST00000625395	KIF1B	O60333	1816 aa		4.53	□□□□□ -1.68
SEC23A-215	ENST00000625395	COL18A1	P39060	1754 aa		4.53	□□□□□ -1.68
SEC23A-215	ENST00000625395	TTC21B	Q7Z4L5	1316 aa		4.53	□□□□□ -1.68
SEC23A-215	ENST00000625395	GLTPD2	A6NH11	291 aa		4.53	□□□□□ -1.68
SEC23A-215	ENST00000625395		E5RJQ4	531 aa		4.53	□□□□□ -1.68
SEC23A-215	ENST00000625395	TP73	O15350	636 aa		4.53	□□□□□ -1.68
SEC23A-215	ENST00000625395	GCAT	O75600	419 aa		4.53	□□□□□ -1.68
SEC23A-215	ENST00000625395	TOP3B	O95985	862 aa	Known RBP	4.53	□□□□□ -1.68
SEC23A-215	ENST00000625395	PARP1	P09874	1014 aa	Known RBP	4.53	□□□□□ -1.68
SEC23A-215	ENST00000625395	APEH	P13798	732 aa	Known RBP	4.53	□□□□□ -1.68
SEC23A-215	ENST00000625395	VEGFA	P15692	232 aa	Predicted RBP	4.53	□□□□□ -1.68
SEC23A-215	ENST00000625395	SFPQ	P23246	707 aa	Known RBP eCLIP	4.53	□□□□□ -1.68
SEC23A-215	ENST00000625395	CFHR3	Q02985	330 aa		4.53	□□□□□ -1.68
SEC23A-215	ENST00000625395	LARS2	Q15031	903 aa	Known RBP	4.53	□□□□□ -1.68
SEC23A-215	ENST00000625395	EPHA10	Q5JZY3	1008 aa		4.53	□□□□□ -1.68
SEC23A-215	ENST00000625395	PLAG1	Q6DJT9	500 aa		4.53	□□□□□ -1.68
SEC23A-215	ENST00000625395	KCTD20	Q7Z5Y7	419 aa		4.53	□□□□□ -1.68
SEC23A-215	ENST00000625395	GLCCI1	Q86VQ1	547 aa		4.53	□□□□□ -1.68
SEC23A-215	ENST00000625395	KRT73	Q86Y46	540 aa		4.53	□□□□□ -1.68
SEC23A-215	ENST00000625395	TTC8	Q8TAM2	541 aa		4.53	□□□□□ -1.68
SEC23A-215	ENST00000625395	PNISR	Q8TF01	805 aa	Known RBP	4.53	□□□□□ -1.68
SEC23A-215	ENST00000625395	TTC17	Q96AE7	1141 aa		4.53	□□□□□ -1.68
SEC23A-215	ENST00000625395	LTV1	Q96GA3	475 aa	Predicted RBP	4.53	□□□□□ -1.68
SEC23A-215	ENST00000625395	WDYHV1	Q96HA8	205 aa		4.53	□□□□□ -1.68
SEC23A-215	ENST00000625395	ZC3H10	Q96K80	434 aa	Known RBP	4.53	□□□□□ -1.68
SEC23A-215	ENST00000625395	DNAJB11	Q9UBS4	358 aa		4.53	□□□□□ -1.68
SEC23A-215	ENST00000625395	STEAP1	Q9UHE8	339 aa		4.53	□□□□□ -1.68
SEC23A-215	ENST00000625395	VPS51	Q9UID3	782 aa		4.53	□□□□□ -1.68
SEC23A-215	ENST00000625395	MID2	Q9UJV3	735 aa		4.53	□□□□□ -1.68
SEC23A-215	ENST00000625395	SCAF8	Q9UPN6	1271 aa	Known RBP	4.53	□□□□□ -1.68
SEC23A-215	ENST00000625395	TBC1D30	Q9Y2I9	924 aa		4.53	□□□□□ -1.68
SEC23A-215	ENST00000625395	COL15A1	P39059	1388 aa		4.53	□□□□□ -1.69
SEC23A-215	ENST00000625395	CCDC7	Q96M83	1385 aa		4.53	□□□□□ -1.69
SEC23A-215	ENST00000625395	WDR90	Q96KV7	1748 aa		4.52	□□□□□ -1.69
SEC23A-215	ENST00000625395	PPEF2	O14830	753 aa		4.52	□□□□□ -1.69
SEC23A-215	ENST00000625395	MAP4K4	O95819	1239 aa	Predicted RBP	4.52	□□□□□ -1.69
SEC23A-215	ENST00000625395	CHRNA5	P30532	468 aa		4.52	□□□□□ -1.69
SEC23A-215	ENST00000625395	MMP13	P45452	471 aa		4.52	□□□□□ -1.69
SEC23A-215	ENST00000625395	CARS	P49589	748 aa	Known RBP	4.52	□□□□□ -1.69
SEC23A-215	ENST00000625395	ALDH5A1	P51649	535 aa	Predicted RBP	4.52	□□□□□ -1.69
SEC23A-215	ENST00000625395	ITPK1	Q13572	414 aa		4.52	□□□□□ -1.69
SEC23A-215	ENST00000625395	KLF9	Q13886	244 aa	Predicted RBP	4.52	□□□□□ -1.69
SEC23A-215	ENST00000625395	TWIST1	Q15672	202 aa		4.52	□□□□□ -1.69
SEC23A-215	ENST00000625395	VSTM1	Q6UX27	236 aa		4.52	□□□□□ -1.69
SEC23A-215	ENST00000625395	DEF8	Q6ZN54	512 aa		4.52	□□□□□ -1.69
SEC23A-215	ENST00000625395	LIX1L	Q8IVB5	337 aa		4.52	□□□□□ -1.69
SEC23A-215	ENST00000625395	PNPLA1	Q8N8W4	532 aa		4.52	□□□□□ -1.69
SEC23A-215	ENST00000625395	KCNH5	Q8NCM2	988 aa		4.52	□□□□□ -1.69
SEC23A-215	ENST00000625395	PHKB	Q93100	1093 aa		4.52	□□□□□ -1.69
SEC23A-215	ENST00000625395	COQ8B	Q96D53	544 aa		4.52	□□□□□ -1.69
SEC23A-215	ENST00000625395	FAM227B	Q96M60	508 aa		4.52	□□□□□ -1.69
SEC23A-215	ENST00000625395	FCRL4	Q96PJ5	515 aa		4.52	□□□□□ -1.69
SEC23A-215	ENST00000625395	SH2D3A	Q9BRG2	576 aa		4.52	□□□□□ -1.69
SEC23A-215	ENST00000625395	BRIP1	Q9BX63	1249 aa		4.52	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 47 ms