RNA–Protein interactions for RNA: ENST00000617958.4

CPEB1-215, Transcript of cytoplasmic polyadenylation element binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene CPEB1, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB1-215ENST00000617958 CYTH1Q15438 398 aa11.04□□□□□ -0.64
CPEB1-215ENST00000617958 C1orf220Q5T0J3 134 aa11.04□□□□□ -0.64
CPEB1-215ENST00000617958 IRAK1BP1Q5VVH5 260 aa11.04□□□□□ -0.64
CPEB1-215ENST00000617958 PDPK2PQ6A1A2 396 aa11.04□□□□□ -0.64
CPEB1-215ENST00000617958 FRMD7Q6ZUT3 714 aa11.04□□□□□ -0.64
CPEB1-215ENST00000617958 LYSMD3Q7Z3D4 306 aa11.04□□□□□ -0.64
CPEB1-215ENST00000617958 FERMT1Q9BQL6 677 aa11.04□□□□□ -0.64
CPEB1-215ENST00000617958 MECRQ9BV79 373 aa11.04□□□□□ -0.64
CPEB1-215ENST00000617958 IMPG2Q9BZV3 1241 aa11.04□□□□□ -0.64
CPEB1-215ENST00000617958 CYP4F11Q9HBI6 524 aa11.04□□□□□ -0.64
CPEB1-215ENST00000617958 RIC8BQ9NVN3 520 aa11.04□□□□□ -0.64
CPEB1-215ENST00000617958 FAM170AA1A519 330 aa11.04□□□□□ -0.64
CPEB1-215ENST00000617958 KRBA1A5PL33 1030 aa11.04□□□□□ -0.64
CPEB1-215ENST00000617958 GPR25O00155 361 aa11.04□□□□□ -0.64
CPEB1-215ENST00000617958 MEIS1O00470 390 aa11.04□□□□□ -0.64
CPEB1-215ENST00000617958 SLC22A2O15244 555 aa11.04□□□□□ -0.64
CPEB1-215ENST00000617958 ETS1P14921 441 aa11.04□□□□□ -0.64
CPEB1-215ENST00000617958 GRSF1Q12849 480 aaKnown RBP eCLIP11.04□□□□□ -0.64
CPEB1-215ENST00000617958 DGKZQ13574 1117 aa11.04□□□□□ -0.64
CPEB1-215ENST00000617958 MTMR2Q13614 643 aa11.04□□□□□ -0.64
CPEB1-215ENST00000617958 LIN9Q5TKA1 542 aa11.04□□□□□ -0.64
CPEB1-215ENST00000617958 HHIPL2Q6UWX4 724 aa11.04□□□□□ -0.64
CPEB1-215ENST00000617958 FAM178BQ8IXR5 827 aa11.04□□□□□ -0.64
CPEB1-215ENST00000617958 FIBCD1Q8N539 461 aa11.04□□□□□ -0.64
CPEB1-215ENST00000617958 ATP6V0D2Q8N8Y2 350 aa11.04□□□□□ -0.64
CPEB1-215ENST00000617958 DHX38Q92620 1227 aaKnown RBP11.04□□□□□ -0.64
CPEB1-215ENST00000617958 KAT5Q92993 513 aa11.04□□□□□ -0.64
CPEB1-215ENST00000617958 C1orf50Q9BV19 199 aa11.04□□□□□ -0.64
CPEB1-215ENST00000617958 NDEL1Q9GZM8 345 aa11.04□□□□□ -0.64
CPEB1-215ENST00000617958 ARMC7Q9H6L4 198 aa11.04□□□□□ -0.64
CPEB1-215ENST00000617958 TUFT1Q9NNX1 390 aa11.04□□□□□ -0.64
CPEB1-215ENST00000617958 GINM1Q9NU53 330 aa11.04□□□□□ -0.64
CPEB1-215ENST00000617958 MARCOQ9UEW3 520 aaPredicted RBP11.04□□□□□ -0.64
CPEB1-215ENST00000617958 TIMM22Q9Y584 194 aa11.04□□□□□ -0.64
CPEB1-215ENST00000617958 PSME4Q14997 1843 aa11.03□□□□□ -0.64
CPEB1-215ENST00000617958 TRIM49D1C9J1S8 452 aa11.03□□□□□ -0.64
CPEB1-215ENST00000617958 H3BMQ9 156 aa11.03□□□□□ -0.64
CPEB1-215ENST00000617958 XPO1O14980 1071 aaKnown RBP11.03□□□□□ -0.64
CPEB1-215ENST00000617958 BANF1O75531 89 aa11.03□□□□□ -0.64
CPEB1-215ENST00000617958 GCATO75600 419 aa11.03□□□□□ -0.64
CPEB1-215ENST00000617958 BCAS2O75934 225 aaPredicted RBP11.03□□□□□ -0.64
CPEB1-215ENST00000617958 C1QAP02745 245 aa11.03□□□□□ -0.64
CPEB1-215ENST00000617958 MAPTP10636 758 aaKnown RBP11.03□□□□□ -0.64
CPEB1-215ENST00000617958 KITP10721 976 aa11.03□□□□□ -0.64
CPEB1-215ENST00000617958 NUMBP49757 651 aa11.03□□□□□ -0.64
CPEB1-215ENST00000617958 GPC3P51654 580 aa11.03□□□□□ -0.64
CPEB1-215ENST00000617958 BMXP51813 675 aa11.03□□□□□ -0.64
CPEB1-215ENST00000617958 NR1D2Q14995 579 aa11.03□□□□□ -0.64
CPEB1-215ENST00000617958 KCNJ8Q15842 424 aa11.03□□□□□ -0.64
CPEB1-215ENST00000617958 LSM12Q3MHD2 195 aaKnown RBP11.03□□□□□ -0.64
CPEB1-215ENST00000617958 PIGGQ5H8A4 983 aa11.03□□□□□ -0.64
CPEB1-215ENST00000617958 AGAP7PQ5VUJ5 663 aa11.03□□□□□ -0.64
CPEB1-215ENST00000617958 C9orf131Q5VYM1 1079 aa11.03□□□□□ -0.64
CPEB1-215ENST00000617958 KRT80Q6KB66 452 aa11.03□□□□□ -0.64
CPEB1-215ENST00000617958 OGFOD2Q6N063 350 aa11.03□□□□□ -0.64
CPEB1-215ENST00000617958 ITIH5Q86UX2 942 aa11.03□□□□□ -0.64
CPEB1-215ENST00000617958 LRRC47Q8N1G4 583 aaKnown RBP11.03□□□□□ -0.64
CPEB1-215ENST00000617958 GSDMBQ8TAX9 411 aa11.03□□□□□ -0.64
CPEB1-215ENST00000617958 HELQQ8TDG4 1101 aa11.03□□□□□ -0.64
CPEB1-215ENST00000617958 COG8Q96MW5 612 aa11.03□□□□□ -0.64
CPEB1-215ENST00000617958 WRNIP1Q96S55 665 aa11.03□□□□□ -0.64
CPEB1-215ENST00000617958 PKP2Q99959 881 aa11.03□□□□□ -0.64
CPEB1-215ENST00000617958 FRMD8Q9BZ67 464 aaPredicted RBP11.03□□□□□ -0.64
CPEB1-215ENST00000617958 C20orf27Q9GZN8 174 aa11.03□□□□□ -0.64
CPEB1-215ENST00000617958 COPS7BQ9H9Q2 264 aaPredicted RBP11.03□□□□□ -0.64
CPEB1-215ENST00000617958 JMJD4Q9H9V9 463 aa11.03□□□□□ -0.64
CPEB1-215ENST00000617958 ZNF70Q9UC06 446 aaPredicted RBP11.03□□□□□ -0.64
CPEB1-215ENST00000617958 IPO11Q9UI26 975 aaKnown RBP11.03□□□□□ -0.64
CPEB1-215ENST00000617958 TNFRSF10AO00220 468 aa11.03□□□□□ -0.64
CPEB1-215ENST00000617958 TRDMT1O14717 391 aaKnown RBP11.03□□□□□ -0.64
CPEB1-215ENST00000617958 RFPL1O75677 317 aa11.03□□□□□ -0.64
CPEB1-215ENST00000617958 ATE1O95260 518 aa11.03□□□□□ -0.64
CPEB1-215ENST00000617958 STAMBPO95630 424 aa11.03□□□□□ -0.64
CPEB1-215ENST00000617958 GABRB3P28472 473 aa11.03□□□□□ -0.64
CPEB1-215ENST00000617958 GNL1P36915 607 aaPredicted RBP11.03□□□□□ -0.64
CPEB1-215ENST00000617958 IDH3AP50213 366 aa11.03□□□□□ -0.64
CPEB1-215ENST00000617958 NLRP11P59045 1033 aaKnown RBP11.03□□□□□ -0.64
CPEB1-215ENST00000617958 ATP1A4Q13733 1029 aa11.03□□□□□ -0.64
CPEB1-215ENST00000617958 TRIM16LQ309B1 348 aa11.03□□□□□ -0.64
CPEB1-215ENST00000617958 MGAT5BQ3V5L5 792 aa11.03□□□□□ -0.64
CPEB1-215ENST00000617958 C16orf46Q6P387 395 aa11.03□□□□□ -0.64
CPEB1-215ENST00000617958 LINC00299Q6ZSB3 139 aa11.03□□□□□ -0.64
CPEB1-215ENST00000617958 MON1BQ7L1V2 547 aa11.03□□□□□ -0.64
CPEB1-215ENST00000617958 UBR7Q8N806 425 aa11.03□□□□□ -0.64
CPEB1-215ENST00000617958 STON2Q8WXE9 905 aa11.03□□□□□ -0.64
CPEB1-215ENST00000617958 TAMM41Q96BW9 452 aa11.03□□□□□ -0.64
CPEB1-215ENST00000617958 ZNF512Q96ME7 567 aaPredicted RBP11.03□□□□□ -0.64
CPEB1-215ENST00000617958 TUBA1CQ9BQE3 449 aa11.03□□□□□ -0.64
CPEB1-215ENST00000617958 OSBPL10Q9BXB5 764 aa11.03□□□□□ -0.64
CPEB1-215ENST00000617958 TMEM206Q9H813 350 aa11.03□□□□□ -0.64
CPEB1-215ENST00000617958 CAAP1Q9H8G2 361 aa11.03□□□□□ -0.64
CPEB1-215ENST00000617958 IFT122Q9HBG6 1241 aa11.03□□□□□ -0.64
CPEB1-215ENST00000617958 MYOZ2Q9NPC6 264 aa11.03□□□□□ -0.64
CPEB1-215ENST00000617958 TEX264Q9Y6I9 313 aa11.03□□□□□ -0.64
CPEB1-215ENST00000617958 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.02□□□□□ -0.64
CPEB1-215ENST00000617958 A0A1B0GTW7 788 aa11.02□□□□□ -0.64
CPEB1-215ENST00000617958 SGK1O00141 431 aa11.02□□□□□ -0.64
CPEB1-215ENST00000617958 FZD9O00144 591 aa11.02□□□□□ -0.64
CPEB1-215ENST00000617958 RGS13O14921 159 aa11.02□□□□□ -0.64
CPEB1-215ENST00000617958 PPP1R11O60927 126 aaPredicted RBP11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms