RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 MCF2LO15068 1137 aa9.24□□□□□ -0.93
CCDC47-207ENST00000612558 RTN3O95197 1032 aaPredicted RBP9.24□□□□□ -0.93
CCDC47-207ENST00000612558 KRT14P02533 472 aa9.24□□□□□ -0.93
CCDC47-207ENST00000612558 SOD2P04179 222 aa9.24□□□□□ -0.93
CCDC47-207ENST00000612558 LAG3P18627 525 aa9.24□□□□□ -0.93
CCDC47-207ENST00000612558 EN2P19622 333 aaPredicted RBP9.24□□□□□ -0.93
CCDC47-207ENST00000612558 ITIH2P19823 946 aa9.24□□□□□ -0.93
CCDC47-207ENST00000612558 KLRC2P26717 231 aa9.24□□□□□ -0.93
CCDC47-207ENST00000612558 ADCY8P40145 1251 aa9.24□□□□□ -0.93
CCDC47-207ENST00000612558 ARL4AP40617 200 aa9.24□□□□□ -0.93
CCDC47-207ENST00000612558 PLTPP55058 493 aa9.24□□□□□ -0.93
CCDC47-207ENST00000612558 SH3BP2P78314 561 aa9.24□□□□□ -0.93
CCDC47-207ENST00000612558 SCAPQ12770 1279 aa9.24□□□□□ -0.93
CCDC47-207ENST00000612558 KCTD19Q17RG1 926 aaPredicted RBP9.24□□□□□ -0.93
CCDC47-207ENST00000612558 ARL13BQ3SXY8 428 aa9.24□□□□□ -0.93
CCDC47-207ENST00000612558 MGAT5BQ3V5L5 792 aa9.24□□□□□ -0.93
CCDC47-207ENST00000612558 EFHC2Q5JST6 749 aa9.24□□□□□ -0.93
CCDC47-207ENST00000612558 SLC9A4Q6AI14 798 aa9.24□□□□□ -0.93
CCDC47-207ENST00000612558 SLC8B1Q6J4K2 584 aa9.24□□□□□ -0.93
CCDC47-207ENST00000612558 PRSS55Q6UWB4 352 aaPredicted RBP9.24□□□□□ -0.93
CCDC47-207ENST00000612558 OTOP2Q7RTS6 562 aa9.24□□□□□ -0.93
CCDC47-207ENST00000612558 TMCO2Q7Z6W1 182 aaPredicted RBP9.24□□□□□ -0.93
CCDC47-207ENST00000612558 MON1AQ86VX9 555 aa9.24□□□□□ -0.93
CCDC47-207ENST00000612558 SLC39A11Q8N1S5 342 aa9.24□□□□□ -0.93
CCDC47-207ENST00000612558 ARHGAP18Q8N392 663 aa9.24□□□□□ -0.93
CCDC47-207ENST00000612558 MREGQ8N565 214 aa9.24□□□□□ -0.93
CCDC47-207ENST00000612558 PQLC3Q8N755 202 aa9.24□□□□□ -0.93
CCDC47-207ENST00000612558 PLD5Q8N7P1 536 aa9.24□□□□□ -0.93
CCDC47-207ENST00000612558 BBOF1Q8ND07 529 aa9.24□□□□□ -0.93
CCDC47-207ENST00000612558 RIN2Q8WYP3 895 aaPredicted RBP9.24□□□□□ -0.93
CCDC47-207ENST00000612558 ART4Q93070 314 aa9.24□□□□□ -0.93
CCDC47-207ENST00000612558 LRRC45Q96CN5 670 aa9.24□□□□□ -0.93
CCDC47-207ENST00000612558 SNF8Q96H20 258 aa9.24□□□□□ -0.93
CCDC47-207ENST00000612558 TMEM169Q96HH4 297 aa9.24□□□□□ -0.93
CCDC47-207ENST00000612558 SPATA17Q96L03 361 aa9.24□□□□□ -0.93
CCDC47-207ENST00000612558 CEP295NLQ96MC4 621 aa9.24□□□□□ -0.93
CCDC47-207ENST00000612558 KCTD15Q96SI1 283 aaPredicted RBP9.24□□□□□ -0.93
CCDC47-207ENST00000612558 FMO2Q99518 471 aa9.24□□□□□ -0.93
CCDC47-207ENST00000612558 VN1R3Q9BXE9 311 aa9.24□□□□□ -0.93
CCDC47-207ENST00000612558 NEUROG2Q9H2A3 272 aa9.24□□□□□ -0.93
CCDC47-207ENST00000612558 FAM204AQ9H8W3 233 aa9.24□□□□□ -0.93
CCDC47-207ENST00000612558 WDR6Q9NNW5 1121 aaKnown RBP9.24□□□□□ -0.93
CCDC47-207ENST00000612558 ZDHHC18Q9NUE0 388 aa9.24□□□□□ -0.93
CCDC47-207ENST00000612558 COMMD8Q9NX08 183 aa9.24□□□□□ -0.93
CCDC47-207ENST00000612558 DDIT4Q9NX09 232 aa9.24□□□□□ -0.93
CCDC47-207ENST00000612558 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.24□□□□□ -0.93
CCDC47-207ENST00000612558 OGFRQ9NZT2 677 aa9.24□□□□□ -0.93
CCDC47-207ENST00000612558 SAE1Q9UBE0 346 aaPredicted RBP9.24□□□□□ -0.93
CCDC47-207ENST00000612558 CDY1Q9Y6F8 540 aa9.24□□□□□ -0.93
CCDC47-207ENST00000612558 COL4A6Q14031 1691 aa9.24□□□□□ -0.93
CCDC47-207ENST00000612558 FAM92AA1XBS5 289 aa9.24□□□□□ -0.93
CCDC47-207ENST00000612558 SGK1O00141 431 aa9.24□□□□□ -0.93
CCDC47-207ENST00000612558 VNN2O95498 520 aa9.24□□□□□ -0.93
CCDC47-207ENST00000612558 FGBP02675 491 aa9.24□□□□□ -0.93
CCDC47-207ENST00000612558 HAPLN1P10915 354 aaPredicted RBP9.24□□□□□ -0.93
CCDC47-207ENST00000612558 ATF2P15336 505 aa9.24□□□□□ -0.93
CCDC47-207ENST00000612558 PECAM1P16284 738 aaPredicted RBP9.24□□□□□ -0.93
CCDC47-207ENST00000612558 IVDP26440 423 aa9.24□□□□□ -0.93
CCDC47-207ENST00000612558 VARSP26640 1264 aaKnown RBP9.24□□□□□ -0.93
CCDC47-207ENST00000612558 STIP1P31948 543 aaKnown RBP9.24□□□□□ -0.93
CCDC47-207ENST00000612558 OR1D2P34982 312 aa9.24□□□□□ -0.93
CCDC47-207ENST00000612558 HSPA9P38646 679 aaKnown RBP9.24□□□□□ -0.93
CCDC47-207ENST00000612558 NR2C2P49116 596 aa9.24□□□□□ -0.93
CCDC47-207ENST00000612558 CXCR3P49682 368 aa9.24□□□□□ -0.93
CCDC47-207ENST00000612558 GPR15P49685 360 aa9.24□□□□□ -0.93
CCDC47-207ENST00000612558 EIF3EP60228 445 aaKnown RBP9.24□□□□□ -0.93
CCDC47-207ENST00000612558 RPL10AP62906 217 aaKnown RBP9.24□□□□□ -0.93
CCDC47-207ENST00000612558 CAV1Q03135 178 aa9.24□□□□□ -0.93
CCDC47-207ENST00000612558 IFRD2Q12894 506 aaPredicted RBP9.24□□□□□ -0.93
CCDC47-207ENST00000612558 DUSP4Q13115 394 aa9.24□□□□□ -0.93
CCDC47-207ENST00000612558 GPS2Q13227 327 aa9.24□□□□□ -0.93
CCDC47-207ENST00000612558 PPIGQ13427 754 aaKnown RBP eCLIP9.24□□□□□ -0.931e-10■■□□□ 11.6
CCDC47-207ENST00000612558 NOMO1Q15155 1222 aa9.24□□□□□ -0.93
CCDC47-207ENST00000612558 TRIP13Q15645 432 aaPredicted RBP9.24□□□□□ -0.93
CCDC47-207ENST00000612558 PSMD5Q16401 504 aa9.24□□□□□ -0.93
CCDC47-207ENST00000612558 PTPRNQ16849 979 aa9.24□□□□□ -0.93
CCDC47-207ENST00000612558 SDHAF4Q5VUM1 108 aa9.24□□□□□ -0.93
CCDC47-207ENST00000612558 ZDHHC24Q6UX98 284 aa9.24□□□□□ -0.93
CCDC47-207ENST00000612558 DENND5BQ6ZUT9 1274 aa9.24□□□□□ -0.93
CCDC47-207ENST00000612558 SCD5Q86SK9 330 aa9.24□□□□□ -0.93
CCDC47-207ENST00000612558 TTC9BQ8N6N2 239 aa9.24□□□□□ -0.93
CCDC47-207ENST00000612558 COLGALT1Q8NBJ5 622 aa9.24□□□□□ -0.93
CCDC47-207ENST00000612558 ADAM32Q8TC27 787 aa9.24□□□□□ -0.93
CCDC47-207ENST00000612558 FBXO25Q8TCJ0 367 aa9.24□□□□□ -0.93
CCDC47-207ENST00000612558 RNF139Q8WU17 664 aa9.24□□□□□ -0.93
CCDC47-207ENST00000612558 CSPG4P5Q96PW8 444 aa9.24□□□□□ -0.93
CCDC47-207ENST00000612558 YME1L1Q96TA2 773 aa9.24□□□□□ -0.93
CCDC47-207ENST00000612558 TMEM121Q9BTD3 319 aa9.24□□□□□ -0.93
CCDC47-207ENST00000612558 MCOLN1Q9GZU1 580 aa9.24□□□□□ -0.93
CCDC47-207ENST00000612558 WDCPQ9H6R7 721 aa9.24□□□□□ -0.93
CCDC47-207ENST00000612558 SPG21Q9NZD8 308 aa9.24□□□□□ -0.93
CCDC47-207ENST00000612558 CWC15Q9P013 229 aaKnown RBP9.24□□□□□ -0.93
CCDC47-207ENST00000612558 MTRF1LQ9UGC7 380 aaKnown RBP9.24□□□□□ -0.93
CCDC47-207ENST00000612558 HPCAL4Q9UM19 191 aa9.24□□□□□ -0.93
CCDC47-207ENST00000612558 MRPL42Q9Y6G3 142 aaKnown RBP9.24□□□□□ -0.93
CCDC47-207ENST00000612558 MKI67P46013 3256 aaKnown RBP9.23□□□□□ -0.93
CCDC47-207ENST00000612558 COL4A4P53420 1690 aaPredicted RBP9.23□□□□□ -0.93
CCDC47-207ENST00000612558 WDR27A2RRH5 827 aa9.23□□□□□ -0.93
CCDC47-207ENST00000612558 ZBBXA8MT70 800 aa9.23□□□□□ -0.93
CCDC47-207ENST00000612558 H3BRJ5 948 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms