RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 SLC39A13Q96H72 371 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 BTBD6Q96KE9 485 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 BTN2A3PQ96KV6 586 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 ZNF597Q96LX8 424 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 PANX3Q96QZ0 392 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 PAFAH2Q99487 392 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 TRABDQ9H4I3 376 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 MINDY3Q9H8M7 445 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 TOMM22Q9NS69 142 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 SIRT5Q9NXA8 310 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 NOP53Q9NZM5 478 aaKnown RBP3.57□□□□□ -1.84
SEC23A-207ENST00000554615 A0A1W2PPM1 405 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 TCRBV5S2A0A599 114 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 TCP11X1B4DZS4 312 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 F8VP50 259 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 H0Y858 1186 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 PLIN3O60664 434 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 MATN4O95460 622 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 MPOP05164 745 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 CD68P34810 354 aaPredicted RBP3.56□□□□□ -1.84
SEC23A-207ENST00000554615 RFC1P35251 1148 aaPredicted RBP3.56□□□□□ -1.84
SEC23A-207ENST00000554615 TNFSF9P41273 254 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 ACADSBP45954 432 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 FAM189BP81408 668 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 MRPS35P82673 323 aaKnown RBP3.56□□□□□ -1.84
SEC23A-207ENST00000554615 GRSF1Q12849 480 aaKnown RBP eCLIP3.56□□□□□ -1.84
SEC23A-207ENST00000554615 MYO1EQ12965 1108 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 IKZF1Q13422 519 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 DGKZQ13574 1117 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 KCTD2Q14681 263 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 DUOXA2Q1HG44 320 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 TYSND1Q2T9J0 566 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 TRMT5Q32P41 509 aaKnown RBP3.56□□□□□ -1.84
SEC23A-207ENST00000554615 SLC25A52Q3SY17 297 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 KRT71Q3SY84 523 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 ANKRD20A2Q5SQ80 823 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 ANKRD20A1Q5TYW2 823 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 ANKRD20A3Q5VUR7 823 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 UNC5AQ6ZN44 842 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 CCDC121Q6ZUS5 278 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 FAM183BPQ6ZVS7 135 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 DET1Q7L5Y6 550 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 SPRED1Q7Z699 444 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 CARM1Q86X55 608 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 TREML1Q86YW5 311 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 TMPRSS6Q8IU80 811 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 CHERPQ8IWX8 916 aaKnown RBP3.56□□□□□ -1.84
SEC23A-207ENST00000554615 HOMEZQ8IX15 550 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 CCDC105Q8IYK2 499 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 CHPFQ8IZ52 775 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 PLCD3Q8N3E9 789 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 ANKRD52Q8NB46 1076 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 SMC1BQ8NDV3 1235 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 GSDMBQ8TAX9 411 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 PYROXD1Q8WU10 500 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 C18orf25Q96B23 403 aaPredicted RBP3.56□□□□□ -1.84
SEC23A-207ENST00000554615 ZNF419Q96HQ0 510 aaPredicted RBP3.56□□□□□ -1.84
SEC23A-207ENST00000554615 LMLNQ96KR4 655 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 TGS1Q96RS0 853 aaKnown RBP3.56□□□□□ -1.84
SEC23A-207ENST00000554615 KCTD15Q96SI1 283 aaPredicted RBP3.56□□□□□ -1.84
SEC23A-207ENST00000554615 VAT1Q99536 393 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 TRIM34Q9BYJ4 488 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 SPATC1LQ9H0A9 340 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 NRDE2Q9H7Z3 1164 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 TLR9Q9NR96 1032 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 POLR3BQ9NW08 1133 aaPredicted RBP3.56□□□□□ -1.84
SEC23A-207ENST00000554615 TAS2R1Q9NYW7 299 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 RAB26Q9ULW5 256 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 TNRC6BQ9UPQ9 1833 aaKnown RBP3.56□□□□□ -1.84
SEC23A-207ENST00000554615 MAGEB16A2A368 324 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 NCAM2O15394 837 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 PAPSS1O43252 624 aaPredicted RBP3.56□□□□□ -1.84
SEC23A-207ENST00000554615 GRID2O43424 1007 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 OPHN1O60890 802 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 ZNF623O75123 536 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 PSMG1O95456 288 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 SNAI1O95863 264 aaPredicted RBP3.56□□□□□ -1.84
SEC23A-207ENST00000554615 TOP3BO95985 862 aaKnown RBP3.56□□□□□ -1.84
SEC23A-207ENST00000554615 MMP2P08253 660 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 PGAM1P18669 254 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 GPD1P21695 349 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 GABRB3P28472 473 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 MIPP30301 263 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 KCNJ1P48048 391 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 ACADVLP49748 655 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 CYP2J2P51589 502 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 ARL4CP56559 192 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 RAB15P59190 212 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 PFKPQ01813 784 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 ZNF211Q13398 564 aaPredicted RBP3.56□□□□□ -1.84
SEC23A-207ENST00000554615 LSAMPQ13449 338 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 KIAA0040Q15053 153 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 LONRF1Q17RB8 773 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 DCAF17Q5H9S7 520 aaPredicted RBP3.56□□□□□ -1.84
SEC23A-207ENST00000554615 GRTP1Q5TC63 336 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 DCLRE1AQ6PJP8 1040 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 AFTPHQ6ULP2 937 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 KDELC1Q6UW63 502 aa3.56□□□□□ -1.84
SEC23A-207ENST00000554615 USP50Q70EL3 339 aaPredicted RBP3.56□□□□□ -1.84
SEC23A-207ENST00000554615 ZNF598Q86UK7 904 aaKnown RBP3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms