RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 GCNT1Q02742 428 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 NFIAQ12857 509 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 MAD2L1Q13257 205 aaPredicted RBP10.85□□□□□ -0.67
NEK1-206ENST00000510533 TMEM132BQ14DG7 1078 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 SVOPQ8N4V2 548 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 HTR3CQ8WXA8 447 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 KAZALD1Q96I82 304 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 DUSP9Q99956 384 aaKnown RBP10.85□□□□□ -0.67
NEK1-206ENST00000510533 RTFDC1Q9BY42 306 aaPredicted RBP10.85□□□□□ -0.67
NEK1-206ENST00000510533 UTP6Q9NYH9 597 aaKnown RBP10.85□□□□□ -0.67
NEK1-206ENST00000510533 PADI4Q9UM07 663 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 BARX2Q9UMQ3 279 aaPredicted RBP10.85□□□□□ -0.67
NEK1-206ENST00000510533 KLHL20Q9Y2M5 609 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 A0A096LPK6 155 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 H0YC42 278 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 INPP4BO15327 924 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 LDLRP01130 860 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 MGAT1P26572 445 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 NPY2RP49146 381 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 DDR2Q16832 855 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 OTUD3Q5T2D3 398 aaPredicted RBP10.85□□□□□ -0.67
NEK1-206ENST00000510533 RSBN1Q5VWQ0 802 aaPredicted RBP10.85□□□□□ -0.67
NEK1-206ENST00000510533 TXNRD3Q86VQ6 643 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 CREG2Q8IUH2 290 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 EID3Q8N140 333 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 ZKSCAN4Q969J2 545 aaPredicted RBP10.85□□□□□ -0.67
NEK1-206ENST00000510533 ZDHHC15Q96MV8 337 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 RNPEPQ9H4A4 650 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 DAPK2Q9UIK4 370 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 RABGEF1Q9UJ41 708 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 VPS28Q9UK41 221 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 TSPAN16Q9UKR8 245 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 TMX2Q9Y320 296 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 MRASO14807 208 aa10.84□□□□□ -0.67
NEK1-206ENST00000510533 TBC1D12O60347 775 aa10.84□□□□□ -0.67
NEK1-206ENST00000510533 ENDOD1O94919 500 aa10.84□□□□□ -0.67
NEK1-206ENST00000510533 CBX6O95503 412 aa10.84□□□□□ -0.67
NEK1-206ENST00000510533 DARSP14868 501 aaKnown RBP10.84□□□□□ -0.67
NEK1-206ENST00000510533 GCLCP48506 637 aaPredicted RBP10.84□□□□□ -0.67
NEK1-206ENST00000510533 ILF2Q12905 390 aaKnown RBP10.84□□□□□ -0.67
NEK1-206ENST00000510533 VPS72Q15906 364 aa10.84□□□□□ -0.67
NEK1-206ENST00000510533 ARMC4Q5T2S8 1044 aa10.84□□□□□ -0.67
NEK1-206ENST00000510533 ZDHHC17Q8IUH5 632 aa10.84□□□□□ -0.67
NEK1-206ENST00000510533 ZCCHC7Q8N3Z6 543 aaKnown RBP10.84□□□□□ -0.67
NEK1-206ENST00000510533 POU5F2Q8N7G0 328 aa10.84□□□□□ -0.67
NEK1-206ENST00000510533 PNMA5Q96PV4 448 aa10.84□□□□□ -0.67
NEK1-206ENST00000510533 DEPDC7Q96QD5 511 aa10.84□□□□□ -0.67
NEK1-206ENST00000510533 PRKD2Q9BZL6 878 aa10.84□□□□□ -0.67
NEK1-206ENST00000510533 NRDE2Q9H7Z3 1164 aa10.84□□□□□ -0.67
NEK1-206ENST00000510533 ZMYND8Q9ULU4 1186 aaPredicted RBP10.84□□□□□ -0.67
NEK1-206ENST00000510533 MYRFQ9Y2G1 1151 aa10.84□□□□□ -0.67
NEK1-206ENST00000510533 ATG7O95352 703 aa10.84□□□□□ -0.67
NEK1-206ENST00000510533 PARNO95453 639 aaKnown RBP10.84□□□□□ -0.67
NEK1-206ENST00000510533 THP07101 528 aa10.84□□□□□ -0.67
NEK1-206ENST00000510533 TPH1P17752 444 aa10.84□□□□□ -0.67
NEK1-206ENST00000510533 PURAQ00577 322 aaKnown RBP10.84□□□□□ -0.67
NEK1-206ENST00000510533 LAMTOR4Q0VGL1 99 aa10.84□□□□□ -0.67
NEK1-206ENST00000510533 SKIV2LQ15477 1246 aaKnown RBP10.84□□□□□ -0.67
NEK1-206ENST00000510533 TMEM119Q4V9L6 283 aa10.84□□□□□ -0.67
NEK1-206ENST00000510533 FBXO47Q5MNV8 452 aa10.84□□□□□ -0.67
NEK1-206ENST00000510533 MARC1Q5VT66 337 aa10.84□□□□□ -0.67
NEK1-206ENST00000510533 MFSD7Q6UXD7 560 aa10.84□□□□□ -0.67
NEK1-206ENST00000510533 NECAB2Q7Z6G3 386 aa10.84□□□□□ -0.67
NEK1-206ENST00000510533 FBXL16Q8N461 479 aa10.84□□□□□ -0.67
NEK1-206ENST00000510533 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.84□□□□□ -0.67
NEK1-206ENST00000510533 UTP15Q8TED0 518 aaKnown RBP10.84□□□□□ -0.67
NEK1-206ENST00000510533 SLC35C1Q96A29 364 aa10.84□□□□□ -0.67
NEK1-206ENST00000510533 MRPL48Q96GC5 212 aaKnown RBP10.84□□□□□ -0.67
NEK1-206ENST00000510533 AVENQ9NQS1 362 aaPredicted RBP10.84□□□□□ -0.67
NEK1-206ENST00000510533 SPATA31A1Q5TZJ5 1347 aa10.84□□□□□ -0.67
NEK1-206ENST00000510533 PHGDHO43175 533 aaKnown RBP10.84□□□□□ -0.67
NEK1-206ENST00000510533 NR2C2P49116 596 aa10.84□□□□□ -0.67
NEK1-206ENST00000510533 CDK7P50613 346 aa10.84□□□□□ -0.67
NEK1-206ENST00000510533 IRGCQ6NXR0 463 aa10.84□□□□□ -0.67
NEK1-206ENST00000510533 CYP4Z2PQ8N1L4 340 aa10.84□□□□□ -0.67
NEK1-206ENST00000510533 FBXO39Q8N4B4 442 aa10.84□□□□□ -0.67
NEK1-206ENST00000510533 TMEM169Q96HH4 297 aa10.84□□□□□ -0.67
NEK1-206ENST00000510533 CEP41Q9BYV8 373 aa10.84□□□□□ -0.67
NEK1-206ENST00000510533 ARMCX1Q9P291 453 aa10.84□□□□□ -0.67
NEK1-206ENST00000510533 STARD13Q9Y3M8 1113 aa10.84□□□□□ -0.67
NEK1-206ENST00000510533 C1orf232A0A0U1RR37 186 aa10.84□□□□□ -0.67
NEK1-206ENST00000510533 FAM220BPB1ANY3 271 aa10.84□□□□□ -0.67
NEK1-206ENST00000510533 UBXN8O00124 270 aa10.84□□□□□ -0.67
NEK1-206ENST00000510533 TK2O00142 265 aa10.84□□□□□ -0.67
NEK1-206ENST00000510533 CCNT2O60583 730 aaKnown RBP10.84□□□□□ -0.67
NEK1-206ENST00000510533 FGFR2P21802 821 aa10.84□□□□□ -0.67
NEK1-206ENST00000510533 PBLDP30039 288 aaPredicted RBP10.84□□□□□ -0.67
NEK1-206ENST00000510533 GRK3P35626 688 aa10.84□□□□□ -0.67
NEK1-206ENST00000510533 ALDH5A1P51649 535 aaPredicted RBP10.84□□□□□ -0.67
NEK1-206ENST00000510533 BACE1P56817 501 aa10.84□□□□□ -0.67
NEK1-206ENST00000510533 PPIDQ08752 370 aaKnown RBP10.84□□□□□ -0.67
NEK1-206ENST00000510533 FAAP100Q0VG06 881 aa10.84□□□□□ -0.67
NEK1-206ENST00000510533 ATP1A4Q13733 1029 aa10.84□□□□□ -0.67
NEK1-206ENST00000510533 INAQ16352 499 aa10.84□□□□□ -0.67
NEK1-206ENST00000510533 MEA1Q16626 185 aa10.84□□□□□ -0.67
NEK1-206ENST00000510533 CTXN3Q4LDR2 81 aa10.84□□□□□ -0.67
NEK1-206ENST00000510533 TYW3Q6IPR3 259 aaKnown RBP10.84□□□□□ -0.67
NEK1-206ENST00000510533 ZCCHC9Q8N567 271 aaKnown RBP10.84□□□□□ -0.67
NEK1-206ENST00000510533 ZNF614Q8N883 585 aa10.84□□□□□ -0.67
NEK1-206ENST00000510533 MRPS31Q92665 395 aaKnown RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms