RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 MMRN2Q9H8L6 949 aa14.35□□□□□ -0.11
SAMM50-204ENST00000493161 CYP3A43Q9HB55 503 aa14.35□□□□□ -0.11
SAMM50-204ENST00000493161 FAM13BQ9NYF5 915 aa14.35□□□□□ -0.11
SAMM50-204ENST00000493161 MARCH2Q9P0N8 246 aa14.35□□□□□ -0.11
SAMM50-204ENST00000493161 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.35□□□□□ -0.11
SAMM50-204ENST00000493161 CKAP5Q14008 2032 aa14.35□□□□□ -0.11
SAMM50-204ENST00000493161 TSPAN3O60637 253 aa14.34□□□□□ -0.11
SAMM50-204ENST00000493161 SLFN14P0C7P3 912 aa14.34□□□□□ -0.11
SAMM50-204ENST00000493161 CYP4F3Q08477 520 aa14.34□□□□□ -0.11
SAMM50-204ENST00000493161 IL27RAQ6UWB1 636 aa14.34□□□□□ -0.11
SAMM50-204ENST00000493161 FAM217AQ8IXS0 508 aa14.34□□□□□ -0.11
SAMM50-204ENST00000493161 ZC3H3Q8IXZ2 948 aaKnown RBP14.34□□□□□ -0.11
SAMM50-204ENST00000493161 CPXM2Q8N436 756 aa14.34□□□□□ -0.11
SAMM50-204ENST00000493161 SEMA4DQ92854 862 aa14.34□□□□□ -0.11
SAMM50-204ENST00000493161 HEXIM2Q96MH2 286 aaKnown RBP14.34□□□□□ -0.11
SAMM50-204ENST00000493161 ARID3AQ99856 593 aa14.34□□□□□ -0.11
SAMM50-204ENST00000493161 DCLK3Q9C098 648 aa14.34□□□□□ -0.11
SAMM50-204ENST00000493161 NIF3L1Q9GZT8 377 aa14.34□□□□□ -0.11
SAMM50-204ENST00000493161 FRMD4BQ9Y2L6 1034 aa14.34□□□□□ -0.11
SAMM50-204ENST00000493161 PCDHGB2Q9Y5G2 931 aa14.34□□□□□ -0.11
SAMM50-204ENST00000493161 MUC22E2RYF6 1773 aaPredicted RBP14.33□□□□□ -0.12
SAMM50-204ENST00000493161 TRABD2BA6NFA1 517 aa14.33□□□□□ -0.12
SAMM50-204ENST00000493161 K7ELQ4 463 aaPredicted RBP14.33□□□□□ -0.12
SAMM50-204ENST00000493161 TULP2O00295 520 aa14.33□□□□□ -0.12
SAMM50-204ENST00000493161 FLRT2O43155 660 aa14.33□□□□□ -0.12
SAMM50-204ENST00000493161 CYBBP04839 570 aa14.33□□□□□ -0.12
SAMM50-204ENST00000493161 HOXD9P28356 352 aaPredicted RBP14.33□□□□□ -0.12
SAMM50-204ENST00000493161 HLA-FP30511 346 aa14.33□□□□□ -0.12
SAMM50-204ENST00000493161 YWHAGP61981 247 aaKnown RBP eCLIP14.33□□□□□ -0.12
SAMM50-204ENST00000493161 CAMK2BQ13554 666 aa14.33□□□□□ -0.12
SAMM50-204ENST00000493161 CAMK2GQ13555 558 aaPredicted RBP14.33□□□□□ -0.12
SAMM50-204ENST00000493161 EIF4HQ15056 248 aaKnown RBP14.33□□□□□ -0.12
SAMM50-204ENST00000493161 RAB41Q5JT25 222 aa14.33□□□□□ -0.12
SAMM50-204ENST00000493161 BHLHA9Q7RTU4 235 aa14.33□□□□□ -0.12
SAMM50-204ENST00000493161 PIGZQ86VD9 579 aa14.33□□□□□ -0.12
SAMM50-204ENST00000493161 CEP57L1Q8IYX8 460 aa14.33□□□□□ -0.12
SAMM50-204ENST00000493161 SLC4A11Q8NBS3 891 aa14.33□□□□□ -0.12
SAMM50-204ENST00000493161 OR2T3Q8NH03 318 aa14.33□□□□□ -0.12
SAMM50-204ENST00000493161 LHX5Q9H2C1 402 aa14.33□□□□□ -0.12
SAMM50-204ENST00000493161 TMEM245Q9H330 911 aa14.33□□□□□ -0.12
SAMM50-204ENST00000493161 TM9SF3Q9HD45 589 aa14.33□□□□□ -0.12
SAMM50-204ENST00000493161 ANKRD6Q9Y2G4 727 aa14.33□□□□□ -0.12
SAMM50-204ENST00000493161 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.33□□□□□ -0.12
SAMM50-204ENST00000493161 NUMA1Q14980 2115 aa14.33□□□□□ -0.12
SAMM50-204ENST00000493161 TMEM131Q92545 1883 aa14.33□□□□□ -0.12
SAMM50-204ENST00000493161 TRIM21P19474 475 aaKnown RBP14.32□□□□□ -0.12
SAMM50-204ENST00000493161 SGSHP51688 502 aa14.32□□□□□ -0.12
SAMM50-204ENST00000493161 AFF3P51826 1226 aaKnown RBP14.32□□□□□ -0.12
SAMM50-204ENST00000493161 TKTL1P51854 596 aa14.32□□□□□ -0.12
SAMM50-204ENST00000493161 RAD23BP54727 409 aa14.32□□□□□ -0.12
SAMM50-204ENST00000493161 IL9RQ01113 521 aa14.32□□□□□ -0.12
SAMM50-204ENST00000493161 TRIP4Q15650 581 aaPredicted RBP14.32□□□□□ -0.12
SAMM50-204ENST00000493161 PTPRNQ16849 979 aa14.32□□□□□ -0.12
SAMM50-204ENST00000493161 FNDC3BQ53EP0 1204 aaKnown RBP14.32□□□□□ -0.12
SAMM50-204ENST00000493161 CCDC157Q569K6 752 aa14.32□□□□□ -0.12
SAMM50-204ENST00000493161 RSRC2Q7L4I2 434 aaKnown RBP14.32□□□□□ -0.12
SAMM50-204ENST00000493161 ADIPOR2Q86V24 386 aa14.32□□□□□ -0.12
SAMM50-204ENST00000493161 BIRC7Q96CA5 298 aa14.32□□□□□ -0.12
SAMM50-204ENST00000493161 CDK5RAP1Q96SZ6 601 aaKnown RBP14.32□□□□□ -0.12
SAMM50-204ENST00000493161 CDC6Q99741 560 aa14.32□□□□□ -0.12
SAMM50-204ENST00000493161 SLC2A11Q9BYW1 496 aa14.32□□□□□ -0.12
SAMM50-204ENST00000493161 IMPG2Q9BZV3 1241 aa14.32□□□□□ -0.12
SAMM50-204ENST00000493161 MTG2Q9H4K7 406 aa14.32□□□□□ -0.12
SAMM50-204ENST00000493161 PRSS16Q9NQE7 514 aa14.32□□□□□ -0.12
SAMM50-204ENST00000493161 STRIP2Q9ULQ0 834 aa14.32□□□□□ -0.12
SAMM50-204ENST00000493161 MAPK8IP1Q9UQF2 711 aa14.32□□□□□ -0.12
SAMM50-204ENST00000493161 TRAF3IP3Q9Y228 551 aa14.32□□□□□ -0.12
SAMM50-204ENST00000493161 APC2O95996 2303 aa14.32□□□□□ -0.12
SAMM50-204ENST00000493161 SMG1Q96Q15 3661 aaKnown RBP14.32□□□□□ -0.12
SAMM50-204ENST00000493161 H0Y8X5 98 aa14.31□□□□□ -0.12
SAMM50-204ENST00000493161 TIMM44O43615 452 aa14.31□□□□□ -0.12
SAMM50-204ENST00000493161 CALUO43852 315 aaPredicted RBP14.31□□□□□ -0.12
SAMM50-204ENST00000493161 FSBPO95073 299 aa14.31□□□□□ -0.12
SAMM50-204ENST00000493161 NR2F2P24468 414 aa14.31□□□□□ -0.12
SAMM50-204ENST00000493161 CLDN6P56747 220 aa14.31□□□□□ -0.12
SAMM50-204ENST00000493161 RPS14P62263 151 aaKnown RBP14.31□□□□□ -0.12
SAMM50-204ENST00000493161 ARID5AQ03989 594 aa14.31□□□□□ -0.12
SAMM50-204ENST00000493161 PKP1Q13835 747 aa14.31□□□□□ -0.12
SAMM50-204ENST00000493161 CHST9Q7L1S5 443 aa14.31□□□□□ -0.12
SAMM50-204ENST00000493161 FMNL3Q8IVF7 1028 aa14.31□□□□□ -0.12
SAMM50-204ENST00000493161 WFDC5Q8TCV5 224 aa14.31□□□□□ -0.12
SAMM50-204ENST00000493161 PLD4Q96BZ4 506 aa14.31□□□□□ -0.12
SAMM50-204ENST00000493161 ORAI3Q9BRQ5 295 aa14.31□□□□□ -0.12
SAMM50-204ENST00000493161 ULBP1Q9BZM6 244 aa14.31□□□□□ -0.12
SAMM50-204ENST00000493161 PCED1AQ9H1Q7 454 aa14.31□□□□□ -0.12
SAMM50-204ENST00000493161 SCUBE2Q9NQ36 999 aa14.31□□□□□ -0.12
SAMM50-204ENST00000493161 ABCB8Q9NUT2 735 aa14.31□□□□□ -0.12
SAMM50-204ENST00000493161 DKK4Q9UBT3 224 aa14.31□□□□□ -0.12
SAMM50-204ENST00000493161 SFMBT1Q9UHJ3 866 aa14.31□□□□□ -0.12
SAMM50-204ENST00000493161 BPTFQ12830 3046 aa14.31□□□□□ -0.12
SAMM50-204ENST00000493161 GCN1Q92616 2671 aaKnown RBP14.3□□□□□ -0.12
SAMM50-204ENST00000493161 A0A1B0GVL5 298 aa14.3□□□□□ -0.12
SAMM50-204ENST00000493161 MAPK13O15264 365 aa14.3□□□□□ -0.12
SAMM50-204ENST00000493161 ZIC2O95409 532 aaPredicted RBP14.3□□□□□ -0.12
SAMM50-204ENST00000493161 SEMA4FO95754 770 aa14.3□□□□□ -0.12
SAMM50-204ENST00000493161 ZBED1O96006 694 aa14.3□□□□□ -0.12
SAMM50-204ENST00000493161 F13A1P00488 732 aa14.3□□□□□ -0.12
SAMM50-204ENST00000493161 PRR29P0C7W0 189 aa14.3□□□□□ -0.12
SAMM50-204ENST00000493161 ZSCAN22P10073 491 aaPredicted RBP14.3□□□□□ -0.12
SAMM50-204ENST00000493161 C7P10643 843 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms