RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 OAS1P00973 400 aaKnown RBP9.96□□□□□ -0.82
APP-213ENST00000464867 ADRB2P07550 413 aa9.96□□□□□ -0.82
APP-213ENST00000464867 ACAT1P24752 427 aaKnown RBP9.96□□□□□ -0.82
APP-213ENST00000464867 PSMA5P28066 241 aa9.96□□□□□ -0.82
APP-213ENST00000464867 RBMS1P29558 406 aaKnown RBP9.96□□□□□ -0.82
APP-213ENST00000464867 LSSP48449 732 aa9.96□□□□□ -0.82
APP-213ENST00000464867 DGKGP49619 791 aa9.96□□□□□ -0.82
APP-213ENST00000464867 CDH8P55286 799 aa9.96□□□□□ -0.82
APP-213ENST00000464867 CTBSQ01459 385 aa9.96□□□□□ -0.82
APP-213ENST00000464867 GRIN1Q05586 938 aa9.96□□□□□ -0.82
APP-213ENST00000464867 TDRD10Q5VZ19 366 aaKnown RBP9.96□□□□□ -0.82
APP-213ENST00000464867 LAYNQ6UX15 382 aa9.96□□□□□ -0.82
APP-213ENST00000464867 VSTM1Q6UX27 236 aa9.96□□□□□ -0.82
APP-213ENST00000464867 BBS7Q8IWZ6 715 aa9.96□□□□□ -0.82
APP-213ENST00000464867 SAP25Q8TEE9 199 aa9.96□□□□□ -0.82
APP-213ENST00000464867 WASF1Q92558 559 aa9.96□□□□□ -0.82
APP-213ENST00000464867 VCPIP1Q96JH7 1222 aa9.96□□□□□ -0.82
APP-213ENST00000464867 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.96□□□□□ -0.82
APP-213ENST00000464867 NACA2Q9H009 215 aa9.96□□□□□ -0.82
APP-213ENST00000464867 ASB7Q9H672 318 aa9.96□□□□□ -0.82
APP-213ENST00000464867 C6orf106Q9H6K1 298 aaPredicted RBP9.96□□□□□ -0.82
APP-213ENST00000464867 POLR1BQ9H9Y6 1135 aa9.96□□□□□ -0.82
APP-213ENST00000464867 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.96□□□□□ -0.82
APP-213ENST00000464867 DNM3Q9UQ16 869 aa9.96□□□□□ -0.82
APP-213ENST00000464867 MAN2B2Q9Y2E5 1009 aa9.96□□□□□ -0.82
APP-213ENST00000464867 C2CD2Q9Y426 696 aa9.96□□□□□ -0.82
APP-213ENST00000464867 RELNP78509 3460 aa9.96□□□□□ -0.82
APP-213ENST00000464867 NUMA1Q14980 2115 aa9.95□□□□□ -0.82
APP-213ENST00000464867 NBASA2RRP1 2371 aa9.95□□□□□ -0.82
APP-213ENST00000464867 SFI1A8K8P3 1242 aa9.95□□□□□ -0.82
APP-213ENST00000464867 CDK2AP1O14519 115 aa9.95□□□□□ -0.82
APP-213ENST00000464867 HNRNPDLO14979 420 aaKnown RBP9.95□□□□□ -0.82
APP-213ENST00000464867 CACNG3O60359 315 aa9.95□□□□□ -0.82
APP-213ENST00000464867 USP12O75317 370 aa9.95□□□□□ -0.82
APP-213ENST00000464867 SEMA4FO95754 770 aa9.95□□□□□ -0.82
APP-213ENST00000464867 OR52Z1P0C646 297 aa9.95□□□□□ -0.82
APP-213ENST00000464867 MAPTP10636 758 aaKnown RBP9.95□□□□□ -0.82
APP-213ENST00000464867 TYRP14679 529 aa9.95□□□□□ -0.82
APP-213ENST00000464867 LHX1P48742 406 aa9.95□□□□□ -0.82
APP-213ENST00000464867 RACK1P63244 317 aaKnown RBP9.95□□□□□ -0.82
APP-213ENST00000464867 ASIC1P78348 528 aa9.95□□□□□ -0.82
APP-213ENST00000464867 NCOA4Q13772 614 aa9.95□□□□□ -0.82
APP-213ENST00000464867 MAPRE1Q15691 268 aaKnown RBP9.95□□□□□ -0.82
APP-213ENST00000464867 PRAMEF14Q5SWL7 426 aa9.95□□□□□ -0.82
APP-213ENST00000464867 CACUL1Q86Y37 369 aa9.95□□□□□ -0.82
APP-213ENST00000464867 DAW1Q8N136 415 aa9.95□□□□□ -0.82
APP-213ENST00000464867 DEPDC4Q8N2C3 294 aa9.95□□□□□ -0.82
APP-213ENST00000464867 PDCL2Q8N4E4 241 aa9.95□□□□□ -0.82
APP-213ENST00000464867 FAM26EQ8N5C1 309 aa9.95□□□□□ -0.82
APP-213ENST00000464867 TMEM161BQ8NDZ6 487 aa9.95□□□□□ -0.82
APP-213ENST00000464867 BIRC7Q96CA5 298 aa9.95□□□□□ -0.82
APP-213ENST00000464867 ZNF274Q96GC6 653 aaPredicted RBP9.95□□□□□ -0.82
APP-213ENST00000464867 PSMG3-AS1Q96PY0 264 aa9.95□□□□□ -0.82
APP-213ENST00000464867 DEPDC7Q96QD5 511 aa9.95□□□□□ -0.82
APP-213ENST00000464867 MSTO1Q9BUK6 570 aa9.95□□□□□ -0.82
APP-213ENST00000464867 TIPINQ9BVW5 301 aa9.95□□□□□ -0.82
APP-213ENST00000464867 HAPLN2Q9GZV7 340 aa9.95□□□□□ -0.82
APP-213ENST00000464867 BTBD1Q9H0C5 482 aa9.95□□□□□ -0.82
APP-213ENST00000464867 GDF3Q9NR23 364 aa9.95□□□□□ -0.82
APP-213ENST00000464867 DDX19AQ9NUU7 478 aaKnown RBP9.95□□□□□ -0.82
APP-213ENST00000464867 PCDHB1Q9Y5F3 818 aa9.95□□□□□ -0.82
APP-213ENST00000464867 SLCO1B1Q9Y6L6 691 aa9.95□□□□□ -0.82
APP-213ENST00000464867 CACNA1DQ01668 2161 aa9.95□□□□□ -0.82
APP-213ENST00000464867 PTPRJQ12913 1337 aa9.94□□□□□ -0.82
APP-213ENST00000464867 PLS3P13797 630 aa9.94□□□□□ -0.82
APP-213ENST00000464867 ACP1P24666 158 aa9.94□□□□□ -0.82
APP-213ENST00000464867 ACSL1P33121 698 aa9.94□□□□□ -0.82
APP-213ENST00000464867 MCM7P33993 719 aa9.94□□□□□ -0.82
APP-213ENST00000464867 SNRPNP63162 240 aaKnown RBP9.94□□□□□ -0.82
APP-213ENST00000464867 NOP14P78316 857 aaKnown RBP9.94□□□□□ -0.82
APP-213ENST00000464867 CYP27A1Q02318 531 aa9.94□□□□□ -0.82
APP-213ENST00000464867 ST3GAL1Q11201 340 aa9.94□□□□□ -0.82
APP-213ENST00000464867 TAF10Q12962 218 aa9.94□□□□□ -0.82
APP-213ENST00000464867 STK3Q13188 491 aa9.94□□□□□ -0.82
APP-213ENST00000464867 ZSCAN23Q3MJ62 389 aa9.94□□□□□ -0.82
APP-213ENST00000464867 HS1BP3Q53T59 392 aa9.94□□□□□ -0.82
APP-213ENST00000464867 KCNT1Q5JUK3 1230 aa9.94□□□□□ -0.82
APP-213ENST00000464867 USP53Q70EK8 1073 aa9.94□□□□□ -0.82
APP-213ENST00000464867 CCDC83Q8IWF9 413 aa9.94□□□□□ -0.82
APP-213ENST00000464867 PDZD8Q8NEN9 1154 aa9.94□□□□□ -0.82
APP-213ENST00000464867 DUSP9Q99956 384 aaKnown RBP9.94□□□□□ -0.82
APP-213ENST00000464867 TTLL2Q9BWV7 592 aa9.94□□□□□ -0.82
APP-213ENST00000464867 TRIM9Q9C026 710 aa9.94□□□□□ -0.82
APP-213ENST00000464867 ZCCHC2Q9C0B9 1178 aaKnown RBP9.94□□□□□ -0.82
APP-213ENST00000464867 GJB4Q9NTQ9 266 aa9.94□□□□□ -0.82
APP-213ENST00000464867 ICE1Q9Y2F5 2266 aa9.93□□□□□ -0.82
APP-213ENST00000464867 BLACEA4D250 179 aa9.93□□□□□ -0.82
APP-213ENST00000464867 TSPAN3O60637 253 aa9.93□□□□□ -0.82
APP-213ENST00000464867 PPFIA2O75334 1257 aa9.93□□□□□ -0.82
APP-213ENST00000464867 GJB6O95452 261 aa9.93□□□□□ -0.82
APP-213ENST00000464867 ITGB2P05107 769 aa9.93□□□□□ -0.82
APP-213ENST00000464867 IRF1P10914 325 aa9.93□□□□□ -0.82
APP-213ENST00000464867 BMP4P12644 408 aa9.93□□□□□ -0.82
APP-213ENST00000464867 BDNFP23560 247 aa9.93□□□□□ -0.82
APP-213ENST00000464867 DAB2P98082 770 aa9.93□□□□□ -0.82
APP-213ENST00000464867 ARID5AQ03989 594 aa9.93□□□□□ -0.82
APP-213ENST00000464867 GOLGA8FQ08AF8 430 aa9.93□□□□□ -0.82
APP-213ENST00000464867 GOLGA8DPQ0D2H9 430 aa9.93□□□□□ -0.82
APP-213ENST00000464867 IFRD2Q12894 506 aaPredicted RBP9.93□□□□□ -0.82
APP-213ENST00000464867 ARL13BQ3SXY8 428 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms