RNA–Protein interactions for RNA: ENST00000457368.2

NEDD1-204, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 3,162 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-204ENST00000457368 FUBP3Q96I24 572 aaKnown RBP eCLIP2.27□□□□□ -2.05
NEDD1-204ENST00000457368 MRGPRX1Q96LB2 322 aa2.27□□□□□ -2.05
NEDD1-204ENST00000457368 PKMYT1Q99640 499 aa2.27□□□□□ -2.05
NEDD1-204ENST00000457368 EIF2AK1Q9BQI3 630 aaKnown RBP2.27□□□□□ -2.05
NEDD1-204ENST00000457368 NTPCRQ9BSD7 190 aaKnown RBP2.27□□□□□ -2.05
NEDD1-204ENST00000457368 KRTAP4-11Q9BYQ6 195 aa2.27□□□□□ -2.05
NEDD1-204ENST00000457368 LNPKQ9C0E8 428 aa2.27□□□□□ -2.05
NEDD1-204ENST00000457368 LSG1Q9H089 658 aaKnown RBP2.27□□□□□ -2.05
NEDD1-204ENST00000457368 C17orf75Q9HAS0 396 aa2.27□□□□□ -2.05
NEDD1-204ENST00000457368 TUFT1Q9NNX1 390 aa2.27□□□□□ -2.05
NEDD1-204ENST00000457368 ARHGEF4Q9NR80 690 aa2.27□□□□□ -2.05
NEDD1-204ENST00000457368 GMIPQ9P107 970 aa2.27□□□□□ -2.05
NEDD1-204ENST00000457368 ARHGAP28Q9P2N2 729 aa2.27□□□□□ -2.05
NEDD1-204ENST00000457368 FTSJ1Q9UET6 329 aa2.27□□□□□ -2.05
NEDD1-204ENST00000457368 KCNG1Q9UIX4 513 aa2.27□□□□□ -2.05
NEDD1-204ENST00000457368 ACSL6Q9UKU0 697 aa2.27□□□□□ -2.05
NEDD1-204ENST00000457368 TPX2Q9ULW0 747 aaKnown RBP2.27□□□□□ -2.05
NEDD1-204ENST00000457368 GDAQ9Y2T3 454 aa2.27□□□□□ -2.05
NEDD1-204ENST00000457368 DERAQ9Y315 318 aa2.27□□□□□ -2.05
NEDD1-204ENST00000457368 HEMK1Q9Y5R4 338 aaPredicted RBP2.27□□□□□ -2.05
NEDD1-204ENST00000457368 MYO16Q9Y6X6 1858 aa2.27□□□□□ -2.05
NEDD1-204ENST00000457368 FAM149AA5PLN7 773 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 PIRO00625 290 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 VILLO15195 856 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 TPD52L2O43399 206 aaKnown RBP2.26□□□□□ -2.05
NEDD1-204ENST00000457368 NDUFS2O75306 463 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 FBXO24O75426 580 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 OR4Q2P0C623 313 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 NCAM1P13591 858 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 HOXB2P14652 356 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 ATP2B1P20020 1258 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 ACP1P24666 158 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 U2AF2P26368 475 aaKnown RBP eCLIP2.26□□□□□ -2.05
NEDD1-204ENST00000457368 AFF3P51826 1226 aaKnown RBP2.26□□□□□ -2.05
NEDD1-204ENST00000457368 GAD2Q05329 585 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 MCL1Q07820 350 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 RESTQ13127 1097 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 CTTNQ14247 550 aaKnown RBP2.26□□□□□ -2.05
NEDD1-204ENST00000457368 KIF19Q2TAC6 998 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 LINC00303Q3SY05 128 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 CFAP221Q4G0U5 840 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 HES3Q5TGS1 186 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 CCDC181Q5TID7 509 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 SFMBT2Q5VUG0 894 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 SPATA1Q5VX52 437 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 RHBDF2Q6PJF5 856 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 MPZL3Q6UWV2 235 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 ZPBP2Q6X784 338 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 CLEC14AQ86T13 490 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 MARCH9Q86YJ5 346 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 DCP1BQ8IZD4 617 aaKnown RBP2.26□□□□□ -2.05
NEDD1-204ENST00000457368 CEP120Q8N960 986 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 EXD3Q8N9H8 876 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 TERB1Q8NA31 727 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 DEPTORQ8TB45 409 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 KIFAP3Q92845 792 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 KCNB2Q92953 911 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 C18orf25Q96B23 403 aaPredicted RBP2.26□□□□□ -2.05
NEDD1-204ENST00000457368 SPATA17Q96L03 361 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 PGLYRP2Q96PD5 576 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 ORAI3Q9BRQ5 295 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 MRPL4Q9BYD3 311 aaKnown RBP2.26□□□□□ -2.05
NEDD1-204ENST00000457368 LINC00597Q9H2U6 94 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 ERVMER34-1Q9H9K5 563 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 ASCL3Q9NQ33 180 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 FBXO10Q9UK96 956 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 WDR3Q9UNX4 943 aaKnown RBP eCLIP2.26□□□□□ -2.05
NEDD1-204ENST00000457368 PCDHB5Q9Y5E4 795 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 AHCTF1Q8WYP5 2266 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 LEFTY2O00292 366 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 LAD1O00515 517 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 LDOC1O95751 146 aaPredicted RBP2.26□□□□□ -2.05
NEDD1-204ENST00000457368 CLTAP09496 248 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 GSPT1P15170 499 aaKnown RBP2.26□□□□□ -2.05
NEDD1-204ENST00000457368 CDC25AP30304 524 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 TXKP42681 527 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 ASPAP45381 313 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 LILRA4P59901 499 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 SEMG2Q02383 582 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 MESP2Q0VG99 397 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 LY6DQ14210 128 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 NOLC1Q14978 699 aaKnown RBP eCLIP2.26□□□□□ -2.05
NEDD1-204ENST00000457368 ARL13BQ3SXY8 428 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 MGAT5BQ3V5L5 792 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 TTC22Q5TAA0 569 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 CREB3L3Q68CJ9 461 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 ALG1LQ6GMV1 187 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 DPH6Q7L8W6 267 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 NEK8Q86SG6 692 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 THEM5Q8N1Q8 247 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 ZCCHC9Q8N567 271 aaKnown RBP2.26□□□□□ -2.05
NEDD1-204ENST00000457368 OXR1Q8N573 874 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 FAM26EQ8N5C1 309 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 FSIP1Q8NA03 581 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 SAP25Q8TEE9 199 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 KCNE4Q8WWG9 221 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 SENP8Q96LD8 212 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 SLC22A12Q96S37 553 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 LGMNQ99538 433 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 NUP58Q9BVL2 599 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms