RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.34□□□□□ -0.43
SEC16A-207ENST00000453963 RGS5O15539 181 aa12.34□□□□□ -0.43
SEC16A-207ENST00000453963 TPBGLP0DKB5 382 aa12.34□□□□□ -0.43
SEC16A-207ENST00000453963 NR2C2P49116 596 aa12.34□□□□□ -0.43
SEC16A-207ENST00000453963 TTLL9Q3SXZ7 439 aa12.34□□□□□ -0.43
SEC16A-207ENST00000453963 SPANXN3Q5MJ09 141 aa12.34□□□□□ -0.43
SEC16A-207ENST00000453963 OTOP1Q7RTM1 612 aa12.34□□□□□ -0.43
SEC16A-207ENST00000453963 SYTL5Q8TDW5 730 aaPredicted RBP12.34□□□□□ -0.43
SEC16A-207ENST00000453963 C9orf16Q9BUW7 83 aa12.34□□□□□ -0.43
SEC16A-207ENST00000453963 A1CFQ9NQ94 594 aaKnown RBP12.34□□□□□ -0.43
SEC16A-207ENST00000453963 PXDNQ92626 1479 aa12.34□□□□□ -0.43
SEC16A-207ENST00000453963 A0A096LPK6 155 aa12.34□□□□□ -0.43
SEC16A-207ENST00000453963 C1orf232A0A0U1RR37 186 aa12.34□□□□□ -0.43
SEC16A-207ENST00000453963 ENTPD5O75356 428 aa12.34□□□□□ -0.43
SEC16A-207ENST00000453963 LDLRP01130 860 aa12.34□□□□□ -0.43
SEC16A-207ENST00000453963 CYP1A2P05177 515 aa12.34□□□□□ -0.43
SEC16A-207ENST00000453963 ORC1Q13415 861 aa12.34□□□□□ -0.43
SEC16A-207ENST00000453963 CSHL1Q14406 222 aa12.34□□□□□ -0.43
SEC16A-207ENST00000453963 LRRC38Q5VT99 294 aa12.34□□□□□ -0.43
SEC16A-207ENST00000453963 LUZP2Q86TE4 346 aa12.34□□□□□ -0.43
SEC16A-207ENST00000453963 NSMCE2Q96MF7 247 aa12.34□□□□□ -0.43
SEC16A-207ENST00000453963 AGO4Q9HCK5 861 aaKnown RBP12.34□□□□□ -0.43
SEC16A-207ENST00000453963 WWOXQ9NZC7 414 aa12.34□□□□□ -0.43
SEC16A-207ENST00000453963 DAPK2Q9UIK4 370 aa12.34□□□□□ -0.43
SEC16A-207ENST00000453963 MCM8Q9UJA3 840 aa12.34□□□□□ -0.43
SEC16A-207ENST00000453963 C17orf102A2RUQ5 167 aa12.34□□□□□ -0.43
SEC16A-207ENST00000453963 KRT87PA6NCN2 255 aa12.34□□□□□ -0.43
SEC16A-207ENST00000453963 C2CD2LO14523 706 aa12.34□□□□□ -0.43
SEC16A-207ENST00000453963 NCKAP1LP55160 1127 aa12.34□□□□□ -0.43
SEC16A-207ENST00000453963 DPYSL3Q14195 570 aa12.34□□□□□ -0.43
SEC16A-207ENST00000453963 SKIV2LQ15477 1246 aaKnown RBP12.34□□□□□ -0.43
SEC16A-207ENST00000453963 AARS2Q5JTZ9 985 aaKnown RBP12.34□□□□□ -0.43
SEC16A-207ENST00000453963 FAM131BQ86XD5 332 aa12.34□□□□□ -0.43
SEC16A-207ENST00000453963 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.34□□□□□ -0.433e-6■■■■■ 69.6
SEC16A-207ENST00000453963 PYDC1Q8WXC3 89 aa12.34□□□□□ -0.43
SEC16A-207ENST00000453963 RSPH1Q8WYR4 309 aa12.34□□□□□ -0.43
SEC16A-207ENST00000453963 KCTD14Q9BQ13 255 aaPredicted RBP12.34□□□□□ -0.43
SEC16A-207ENST00000453963 DCUN1D5Q9BTE7 237 aa12.34□□□□□ -0.43
SEC16A-207ENST00000453963 APOL5Q9BWW9 433 aa12.34□□□□□ -0.43
SEC16A-207ENST00000453963 SPATA16Q9BXB7 569 aa12.34□□□□□ -0.43
SEC16A-207ENST00000453963 COMMD8Q9NX08 183 aa12.34□□□□□ -0.43
SEC16A-207ENST00000453963 STMN3Q9NZ72 180 aa12.34□□□□□ -0.43
SEC16A-207ENST00000453963 ANKRD6Q9Y2G4 727 aa12.34□□□□□ -0.43
SEC16A-207ENST00000453963 MRASO14807 208 aa12.33□□□□□ -0.44
SEC16A-207ENST00000453963 PHGDHO43175 533 aaKnown RBP12.33□□□□□ -0.44
SEC16A-207ENST00000453963 SMNDC1O75940 238 aaKnown RBP eCLIP12.33□□□□□ -0.44
SEC16A-207ENST00000453963 JCHAINP01591 159 aa12.33□□□□□ -0.44
SEC16A-207ENST00000453963 VEGFAP15692 232 aaPredicted RBP12.33□□□□□ -0.44
SEC16A-207ENST00000453963 EIF4BP23588 611 aaKnown RBP12.33□□□□□ -0.44
SEC16A-207ENST00000453963 SHMT1P34896 483 aa12.33□□□□□ -0.44
SEC16A-207ENST00000453963 RPL5P46777 297 aaKnown RBP12.33□□□□□ -0.44
SEC16A-207ENST00000453963 FAM98BQ52LJ0 330 aaKnown RBP12.33□□□□□ -0.44
SEC16A-207ENST00000453963 ARMCX4Q5H9R4 360 aa12.33□□□□□ -0.44
SEC16A-207ENST00000453963 LNX1Q8TBB1 728 aaPredicted RBP12.33□□□□□ -0.44
SEC16A-207ENST00000453963 SLC25A23Q9BV35 468 aa12.33□□□□□ -0.44
SEC16A-207ENST00000453963 ATAD3AQ9NVI7 634 aa12.33□□□□□ -0.44
SEC16A-207ENST00000453963 CYTH3O43739 400 aa12.33□□□□□ -0.44
SEC16A-207ENST00000453963 SLC26A2P50443 739 aa12.33□□□□□ -0.44
SEC16A-207ENST00000453963 ATP1A4Q13733 1029 aa12.33□□□□□ -0.44
SEC16A-207ENST00000453963 NFIL3Q16649 462 aa12.33□□□□□ -0.44
SEC16A-207ENST00000453963 TTC27Q6P3X3 843 aa12.33□□□□□ -0.44
SEC16A-207ENST00000453963 PLEKHM3Q6ZWE6 761 aa12.33□□□□□ -0.44
SEC16A-207ENST00000453963 DHRSXQ8N5I4 330 aa12.33□□□□□ -0.44
SEC16A-207ENST00000453963 PPP1R10Q96QC0 940 aaKnown RBP12.33□□□□□ -0.44
SEC16A-207ENST00000453963 DMAP1Q9NPF5 467 aaPredicted RBP12.33□□□□□ -0.44
SEC16A-207ENST00000453963 C2orf81A6NN90 581 aa12.33□□□□□ -0.44
SEC16A-207ENST00000453963 FBXO21O94952 628 aa12.33□□□□□ -0.44
SEC16A-207ENST00000453963 MAPK1P28482 360 aa12.33□□□□□ -0.44
SEC16A-207ENST00000453963 PPP3CCP48454 512 aa12.33□□□□□ -0.44
SEC16A-207ENST00000453963 CD151P48509 253 aa12.33□□□□□ -0.44
SEC16A-207ENST00000453963 CDH17Q12864 832 aa12.33□□□□□ -0.44
SEC16A-207ENST00000453963 FASTKQ14296 549 aaKnown RBP12.33□□□□□ -0.44
SEC16A-207ENST00000453963 C10orf120Q5SQS8 335 aa12.33□□□□□ -0.44
SEC16A-207ENST00000453963 ATP6V0D2Q8N8Y2 350 aa12.33□□□□□ -0.44
SEC16A-207ENST00000453963 FAM163AQ96GL9 167 aaPredicted RBP12.33□□□□□ -0.44
SEC16A-207ENST00000453963 APOL2Q9BQE5 337 aa12.33□□□□□ -0.44
SEC16A-207ENST00000453963 CRLS1Q9UJA2 301 aa12.33□□□□□ -0.44
SEC16A-207ENST00000453963 ZMYND8Q9ULU4 1186 aaPredicted RBP12.33□□□□□ -0.44
SEC16A-207ENST00000453963 ITSN1Q15811 1721 aa12.33□□□□□ -0.44
SEC16A-207ENST00000453963 TRIM24O15164 1050 aa12.32□□□□□ -0.44
SEC16A-207ENST00000453963 CNOT3O75175 753 aaKnown RBP12.32□□□□□ -0.44
SEC16A-207ENST00000453963 KRT36O76013 467 aa12.32□□□□□ -0.44
SEC16A-207ENST00000453963 B3GAT3O94766 335 aa12.32□□□□□ -0.44
SEC16A-207ENST00000453963 DNAJB2P25686 324 aa12.32□□□□□ -0.44
SEC16A-207ENST00000453963 CRABP2P29373 138 aa12.32□□□□□ -0.44
SEC16A-207ENST00000453963 NPY2RP49146 381 aa12.32□□□□□ -0.44
SEC16A-207ENST00000453963 NME5P56597 212 aa12.32□□□□□ -0.44
SEC16A-207ENST00000453963 CCDC142Q17RM4 750 aa12.32□□□□□ -0.44
SEC16A-207ENST00000453963 AADACL2Q6P093 401 aa12.32□□□□□ -0.44
SEC16A-207ENST00000453963 HTR3CQ8WXA8 447 aa12.32□□□□□ -0.44
SEC16A-207ENST00000453963 DNAJC19Q96DA6 116 aa12.32□□□□□ -0.44
SEC16A-207ENST00000453963 NDUFAF1Q9Y375 327 aa12.32□□□□□ -0.44
SEC16A-207ENST00000453963 FAM86B1E9PN63 330 aa12.32□□□□□ -0.44
SEC16A-207ENST00000453963 RBAK-RBAKDNI3L0D1 243 aa12.32□□□□□ -0.44
SEC16A-207ENST00000453963 AP1G2O75843 785 aa12.32□□□□□ -0.44
SEC16A-207ENST00000453963 DDNO94850 711 aaPredicted RBP12.32□□□□□ -0.44
SEC16A-207ENST00000453963 FAM86B2P0C5J1 330 aa12.32□□□□□ -0.44
SEC16A-207ENST00000453963 HOXA10P31260 410 aaPredicted RBP12.32□□□□□ -0.44
SEC16A-207ENST00000453963 THPOP40225 353 aa12.32□□□□□ -0.44
SEC16A-207ENST00000453963 ALDH1A3P47895 512 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms