RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 USP12O75317 370 aa10.9□□□□□ -0.67
COL12A1-203ENST00000416123 RTN3O95197 1032 aaPredicted RBP10.9□□□□□ -0.67
COL12A1-203ENST00000416123 KRT16P08779 473 aa10.9□□□□□ -0.67
COL12A1-203ENST00000416123 SP3Q02447 781 aa10.9□□□□□ -0.67
COL12A1-203ENST00000416123 KCNMA1Q12791 1236 aa10.9□□□□□ -0.67
COL12A1-203ENST00000416123 NPNTQ6UXI9 565 aa10.9□□□□□ -0.67
COL12A1-203ENST00000416123 VGLL2Q8N8G2 317 aa10.9□□□□□ -0.67
COL12A1-203ENST00000416123 TBC1D13Q9NVG8 400 aa10.9□□□□□ -0.67
COL12A1-203ENST00000416123 KPNA3O00505 521 aaPredicted RBP10.89□□□□□ -0.67
COL12A1-203ENST00000416123 HMGCRP04035 888 aa10.89□□□□□ -0.67
COL12A1-203ENST00000416123 MAPTP10636 758 aaKnown RBP10.89□□□□□ -0.67
COL12A1-203ENST00000416123 COPAP53621 1224 aa10.89□□□□□ -0.67
COL12A1-203ENST00000416123 TRIP10Q15642 601 aa10.89□□□□□ -0.67
COL12A1-203ENST00000416123 FAM180AQ6UWF9 173 aa10.89□□□□□ -0.67
COL12A1-203ENST00000416123 PABPC3Q9H361 631 aaKnown RBP10.89□□□□□ -0.67
COL12A1-203ENST00000416123 PPCSQ9HAB8 311 aa10.89□□□□□ -0.67
COL12A1-203ENST00000416123 CITO14578 2027 aa10.89□□□□□ -0.67
COL12A1-203ENST00000416123 XPO1O14980 1071 aaKnown RBP10.89□□□□□ -0.67
COL12A1-203ENST00000416123 CYP7B1O75881 506 aa10.89□□□□□ -0.67
COL12A1-203ENST00000416123 APOA4P06727 396 aa10.89□□□□□ -0.67
COL12A1-203ENST00000416123 GZMAP12544 262 aa10.89□□□□□ -0.67
COL12A1-203ENST00000416123 SDHAF4Q5VUM1 108 aa10.89□□□□□ -0.67
COL12A1-203ENST00000416123 DAB2IPQ5VWQ8 1189 aa10.89□□□□□ -0.67
COL12A1-203ENST00000416123 CHMP1BQ7LBR1 199 aa10.89□□□□□ -0.67
COL12A1-203ENST00000416123 ZNF438Q7Z4V0 828 aa10.89□□□□□ -0.67
COL12A1-203ENST00000416123 WDR18Q9BV38 432 aa10.89□□□□□ -0.67
COL12A1-203ENST00000416123 NMRK1Q9NWW6 199 aa10.89□□□□□ -0.67
COL12A1-203ENST00000416123 NT5C1B-RDH14C9J2C7 533 aa10.89□□□□□ -0.67
COL12A1-203ENST00000416123 TAF2Q6P1X5 1199 aa10.89□□□□□ -0.67
COL12A1-203ENST00000416123 AHCYL2Q96HN2 611 aaKnown RBP10.89□□□□□ -0.67
COL12A1-203ENST00000416123 DNAJC16Q9Y2G8 782 aa10.89□□□□□ -0.67
COL12A1-203ENST00000416123 CCDC85CA6NKD9 419 aa10.89□□□□□ -0.67
COL12A1-203ENST00000416123 RASSF9O75901 435 aa10.89□□□□□ -0.67
COL12A1-203ENST00000416123 ILDR1Q86SU0 546 aaPredicted RBP10.89□□□□□ -0.67
COL12A1-203ENST00000416123 FRMD8P1Q9BZ68 369 aaPredicted RBP10.89□□□□□ -0.67
COL12A1-203ENST00000416123 NFASCO94856 1347 aa10.89□□□□□ -0.67
COL12A1-203ENST00000416123 MYH13Q9UKX3 1938 aa10.89□□□□□ -0.67
COL12A1-203ENST00000416123 SMAPO00193 183 aa10.89□□□□□ -0.67
COL12A1-203ENST00000416123 GSTM1P09488 218 aa10.89□□□□□ -0.67
COL12A1-203ENST00000416123 CTNNB1P35222 781 aa10.89□□□□□ -0.67
COL12A1-203ENST00000416123 SERPINB4P48594 390 aa10.89□□□□□ -0.67
COL12A1-203ENST00000416123 TRIM60Q495X7 471 aa10.89□□□□□ -0.67
COL12A1-203ENST00000416123 AASDHQ4L235 1098 aaPredicted RBP10.89□□□□□ -0.67
COL12A1-203ENST00000416123 ZBTB10Q96DT7 871 aa10.89□□□□□ -0.67
COL12A1-203ENST00000416123 PORCNQ9H237 461 aa10.89□□□□□ -0.67
COL12A1-203ENST00000416123 MFSD1Q9H3U5 465 aa10.89□□□□□ -0.67
COL12A1-203ENST00000416123 SPACA6W5XKT8 324 aa10.89□□□□□ -0.67
COL12A1-203ENST00000416123 ARHGAP23Q9P227 1491 aa10.89□□□□□ -0.67
COL12A1-203ENST00000416123 NRCAMQ92823 1304 aa10.89□□□□□ -0.67
COL12A1-203ENST00000416123 UBTFL6P0CB48 400 aaPredicted RBP10.89□□□□□ -0.67
COL12A1-203ENST00000416123 HPGDP15428 266 aa10.89□□□□□ -0.67
COL12A1-203ENST00000416123 POLR2EP19388 210 aaKnown RBP10.89□□□□□ -0.67
COL12A1-203ENST00000416123 YWHAZP63104 245 aaKnown RBP10.89□□□□□ -0.67
COL12A1-203ENST00000416123 SKOR1P84550 965 aa10.89□□□□□ -0.67
COL12A1-203ENST00000416123 LRRC23Q53EV4 343 aaPredicted RBP10.89□□□□□ -0.67
COL12A1-203ENST00000416123 SEL1L3Q68CR1 1132 aa10.89□□□□□ -0.67
COL12A1-203ENST00000416123 ANKS6Q68DC2 871 aa10.89□□□□□ -0.67
COL12A1-203ENST00000416123 DENND1CQ8IV53 801 aa10.89□□□□□ -0.67
COL12A1-203ENST00000416123 MRPL17Q9NRX2 175 aaKnown RBP10.89□□□□□ -0.67
COL12A1-203ENST00000416123 FRMPD4Q14CM0 1322 aa10.89□□□□□ -0.67
COL12A1-203ENST00000416123 CDH2P19022 906 aaPredicted RBP10.89□□□□□ -0.67
COL12A1-203ENST00000416123 NCKAP1LP55160 1127 aa10.89□□□□□ -0.67
COL12A1-203ENST00000416123 MRPS6P82932 125 aaKnown RBP10.89□□□□□ -0.67
COL12A1-203ENST00000416123 C1QBPQ07021 282 aaKnown RBP10.89□□□□□ -0.67
COL12A1-203ENST00000416123 TBL3Q12788 808 aaKnown RBP10.89□□□□□ -0.67
COL12A1-203ENST00000416123 TRPC4Q9UBN4 977 aa10.89□□□□□ -0.67
COL12A1-203ENST00000416123 SERPINF2P08697 491 aa10.88□□□□□ -0.67
COL12A1-203ENST00000416123 FMO4P31512 558 aa10.88□□□□□ -0.67
COL12A1-203ENST00000416123 PLK1P53350 603 aa10.88□□□□□ -0.67
COL12A1-203ENST00000416123 SFSWAPQ12872 951 aaKnown RBP10.88□□□□□ -0.67
COL12A1-203ENST00000416123 DEFB115Q30KQ5 88 aa10.88□□□□□ -0.67
COL12A1-203ENST00000416123 POTEAQ6S8J7 498 aa10.88□□□□□ -0.67
COL12A1-203ENST00000416123 KCNMB4Q86W47 210 aa10.88□□□□□ -0.67
COL12A1-203ENST00000416123 CATSPER2Q96P56 530 aa10.88□□□□□ -0.67
COL12A1-203ENST00000416123 ELOVL4Q9GZR5 314 aa10.88□□□□□ -0.67
COL12A1-203ENST00000416123 DRG1Q9Y295 367 aaKnown RBP10.88□□□□□ -0.67
COL12A1-203ENST00000416123 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.88□□□□□ -0.67
COL12A1-203ENST00000416123 RPLP2P05387 115 aaKnown RBP10.88□□□□□ -0.67
COL12A1-203ENST00000416123 AXLP30530 894 aa10.88□□□□□ -0.67
COL12A1-203ENST00000416123 TRPC1P48995 793 aa10.88□□□□□ -0.67
COL12A1-203ENST00000416123 CRADDP78560 199 aa10.88□□□□□ -0.67
COL12A1-203ENST00000416123 CCDC142Q17RM4 750 aa10.88□□□□□ -0.67
COL12A1-203ENST00000416123 ACTRT1Q8TDG2 376 aa10.88□□□□□ -0.67
COL12A1-203ENST00000416123 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.88□□□□□ -0.67
COL12A1-203ENST00000416123 TBL1YQ9BQ87 522 aa10.88□□□□□ -0.67
COL12A1-203ENST00000416123 ULBP1Q9BZM6 244 aa10.88□□□□□ -0.67
COL12A1-203ENST00000416123 MIEF1Q9NQG6 463 aa10.88□□□□□ -0.67
COL12A1-203ENST00000416123 SH3BP4Q9P0V3 963 aa10.88□□□□□ -0.67
COL12A1-203ENST00000416123 PARP4Q9UKK3 1724 aaKnown RBP10.88□□□□□ -0.67
COL12A1-203ENST00000416123 TBC1D3BA6NDS4 549 aa10.88□□□□□ -0.67
COL12A1-203ENST00000416123 ZNF682O95780 498 aa10.88□□□□□ -0.67
COL12A1-203ENST00000416123 FBXO25Q8TCJ0 367 aa10.88□□□□□ -0.67
COL12A1-203ENST00000416123 DNPEPQ9ULA0 475 aa10.88□□□□□ -0.67
COL12A1-203ENST00000416123 SPEF2Q9C093 1822 aa10.88□□□□□ -0.67
COL12A1-203ENST00000416123 CCT8L1PA6NM43 557 aa10.88□□□□□ -0.67
COL12A1-203ENST00000416123 RNF103O00237 685 aa10.88□□□□□ -0.67
COL12A1-203ENST00000416123 PIK3CDO00329 1044 aa10.88□□□□□ -0.67
COL12A1-203ENST00000416123 NIPA1Q7RTP0 329 aa10.88□□□□□ -0.67
COL12A1-203ENST00000416123 C12orf29Q8N999 325 aa10.88□□□□□ -0.67
COL12A1-203ENST00000416123 EXOSC4Q9NPD3 245 aaKnown RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms