RNA–Protein interactions for RNA: ENST00000372192.3

PTCH2-201, Transcript of patched 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTCH2, Length 4,225 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2-201ENST00000372192 FAM200BP0CF97 657 aa11.75□□□□□ -0.53
PTCH2-201ENST00000372192 STAG3L1P0CL83 205 aa11.75□□□□□ -0.53
PTCH2-201ENST00000372192 COX4I1P13073 169 aa11.75□□□□□ -0.53
PTCH2-201ENST00000372192 VCLP18206 1134 aa11.75□□□□□ -0.53
PTCH2-201ENST00000372192 ACADSBP45954 432 aa11.75□□□□□ -0.53
PTCH2-201ENST00000372192 TPI1P60174 286 aa11.75□□□□□ -0.53
PTCH2-201ENST00000372192 NAB1Q13506 487 aa11.75□□□□□ -0.53
PTCH2-201ENST00000372192 CAPSQ13938 189 aa11.75□□□□□ -0.53
PTCH2-201ENST00000372192 SKA1Q96BD8 255 aa11.75□□□□□ -0.53
PTCH2-201ENST00000372192 CATSPER2Q96P56 530 aa11.75□□□□□ -0.53
PTCH2-201ENST00000372192 PIH1D1Q9NWS0 290 aaKnown RBP11.75□□□□□ -0.53
PTCH2-201ENST00000372192 VAV1P15498 845 aa11.75□□□□□ -0.53
PTCH2-201ENST00000372192 IL10P22301 178 aa11.75□□□□□ -0.53
PTCH2-201ENST00000372192 MRPS22P82650 360 aaKnown RBP11.75□□□□□ -0.53
PTCH2-201ENST00000372192 PTK2BQ14289 1009 aa11.75□□□□□ -0.53
PTCH2-201ENST00000372192 GRTP1Q5TC63 336 aa11.75□□□□□ -0.53
PTCH2-201ENST00000372192 SULF1Q8IWU6 871 aa11.75□□□□□ -0.53
PTCH2-201ENST00000372192 DPP3Q9NY33 737 aa11.75□□□□□ -0.53
PTCH2-201ENST00000372192 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.75□□□□□ -0.53
PTCH2-201ENST00000372192 AURKCQ9UQB9 309 aa11.75□□□□□ -0.53
PTCH2-201ENST00000372192 INPP5FQ9Y2H2 1132 aa11.75□□□□□ -0.53
PTCH2-201ENST00000372192 A0A096LPK6 155 aa11.74□□□□□ -0.53
PTCH2-201ENST00000372192 ARHGEF37A1IGU5 675 aa11.74□□□□□ -0.53
PTCH2-201ENST00000372192 EEF2KO00418 725 aaKnown RBP11.74□□□□□ -0.53
PTCH2-201ENST00000372192 ACKR2O00590 384 aa11.74□□□□□ -0.53
PTCH2-201ENST00000372192 ZMPSTE24O75844 475 aa11.74□□□□□ -0.53
PTCH2-201ENST00000372192 ME2P23368 584 aa11.74□□□□□ -0.53
PTCH2-201ENST00000372192 FOLH1Q04609 750 aa11.74□□□□□ -0.53
PTCH2-201ENST00000372192 SLC18A2Q05940 514 aa11.74□□□□□ -0.53
PTCH2-201ENST00000372192 MPP3Q13368 585 aa11.74□□□□□ -0.53
PTCH2-201ENST00000372192 DCAF6Q58WW2 860 aa11.74□□□□□ -0.53
PTCH2-201ENST00000372192 RNF135Q8IUD6 432 aa11.74□□□□□ -0.53
PTCH2-201ENST00000372192 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.74□□□□□ -0.53
PTCH2-201ENST00000372192 TFAP2BQ92481 460 aa11.74□□□□□ -0.53
PTCH2-201ENST00000372192 USP13Q92995 863 aaPredicted RBP11.74□□□□□ -0.53
PTCH2-201ENST00000372192 DGCR14Q96DF8 476 aaKnown RBP11.74□□□□□ -0.53
PTCH2-201ENST00000372192 EML4Q9HC35 981 aaKnown RBP11.74□□□□□ -0.53
PTCH2-201ENST00000372192 CHCHD3Q9NX63 227 aaKnown RBP11.74□□□□□ -0.53
PTCH2-201ENST00000372192 C6orf203Q9P0P8 240 aaPredicted RBP11.74□□□□□ -0.53
PTCH2-201ENST00000372192 RREB1Q92766 1687 aa11.74□□□□□ -0.53
PTCH2-201ENST00000372192 CCDC189A1A4V9 331 aa11.74□□□□□ -0.53
PTCH2-201ENST00000372192 C3orf70A6NLC5 250 aaPredicted RBP11.74□□□□□ -0.53
PTCH2-201ENST00000372192 TRPC5OSA6NMA1 111 aa11.74□□□□□ -0.53
PTCH2-201ENST00000372192 HBP1O60381 514 aa11.74□□□□□ -0.53
PTCH2-201ENST00000372192 PDGFRBP09619 1106 aa11.74□□□□□ -0.53
PTCH2-201ENST00000372192 RNF148Q8N7C7 305 aa11.74□□□□□ -0.53
PTCH2-201ENST00000372192 TNIP3Q96KP6 325 aa11.74□□□□□ -0.53
PTCH2-201ENST00000372192 GRIP2Q9C0E4 1043 aa11.74□□□□□ -0.53
PTCH2-201ENST00000372192 CLCN3P51790 818 aa11.74□□□□□ -0.53
PTCH2-201ENST00000372192 GRAMD4Q6IC98 578 aa11.74□□□□□ -0.53
PTCH2-201ENST00000372192 RWDD4Q6NW29 188 aaKnown RBP11.74□□□□□ -0.53
PTCH2-201ENST00000372192 ABHD15Q6UXT9 468 aa11.74□□□□□ -0.53
PTCH2-201ENST00000372192 EFCAB3Q8N7B9 438 aa11.74□□□□□ -0.53
PTCH2-201ENST00000372192 LZICQ8WZA0 190 aa11.74□□□□□ -0.53
PTCH2-201ENST00000372192 EZH1Q92800 747 aaPredicted RBP11.74□□□□□ -0.53
PTCH2-201ENST00000372192 CPNE1Q99829 537 aa11.74□□□□□ -0.53
PTCH2-201ENST00000372192 SNRNP25Q9BV90 132 aaKnown RBP11.74□□□□□ -0.53
PTCH2-201ENST00000372192 FSD1LQ9BXM9 530 aa11.74□□□□□ -0.53
PTCH2-201ENST00000372192 ZCWPW1Q9H0M4 648 aa11.74□□□□□ -0.53
PTCH2-201ENST00000372192 COPS7BQ9H9Q2 264 aaPredicted RBP11.74□□□□□ -0.53
PTCH2-201ENST00000372192 ATXN10Q9UBB4 475 aa11.74□□□□□ -0.53
PTCH2-201ENST00000372192 ERBB2P04626 1255 aa11.73□□□□□ -0.53
PTCH2-201ENST00000372192 RAB27AP51159 221 aa11.73□□□□□ -0.53
PTCH2-201ENST00000372192 OAZ1P54368 228 aa11.73□□□□□ -0.53
PTCH2-201ENST00000372192 OGDHQ02218 1023 aa11.73□□□□□ -0.53
PTCH2-201ENST00000372192 PRKAA1Q13131 559 aa11.73□□□□□ -0.53
PTCH2-201ENST00000372192 TTLL4Q14679 1199 aa11.73□□□□□ -0.53
PTCH2-201ENST00000372192 SLC5A9Q2M3M2 681 aa11.73□□□□□ -0.53
PTCH2-201ENST00000372192 ZC3H12AQ5D1E8 599 aaKnown RBP11.73□□□□□ -0.53
PTCH2-201ENST00000372192 TMCO4Q5TGY1 634 aa11.73□□□□□ -0.53
PTCH2-201ENST00000372192 C16orf87Q6PH81 154 aa11.73□□□□□ -0.53
PTCH2-201ENST00000372192 ISLR2Q6UXK2 745 aa11.73□□□□□ -0.53
PTCH2-201ENST00000372192 FAM131BQ86XD5 332 aa11.73□□□□□ -0.53
PTCH2-201ENST00000372192 XYLT1Q86Y38 959 aa11.73□□□□□ -0.53
PTCH2-201ENST00000372192 SLC4A11Q8NBS3 891 aa11.73□□□□□ -0.53
PTCH2-201ENST00000372192 TUBGCP5Q96RT8 1024 aa11.73□□□□□ -0.53
PTCH2-201ENST00000372192 EBF3Q9H4W6 596 aa11.73□□□□□ -0.53
PTCH2-201ENST00000372192 PNPOQ9NVS9 261 aa11.73□□□□□ -0.53
PTCH2-201ENST00000372192 COL22A1Q8NFW1 1626 aaPredicted RBP11.73□□□□□ -0.53
PTCH2-201ENST00000372192 C15orf38-AP3S2A0A0A6YYH1 394 aa11.73□□□□□ -0.53
PTCH2-201ENST00000372192 MTSS1O43312 755 aa11.73□□□□□ -0.53
PTCH2-201ENST00000372192 SIN3BO75182 1162 aa11.73□□□□□ -0.53
PTCH2-201ENST00000372192 MPOP05164 745 aa11.73□□□□□ -0.53
PTCH2-201ENST00000372192 MLH1P40692 756 aa11.73□□□□□ -0.53
PTCH2-201ENST00000372192 NEK3P51956 506 aa11.73□□□□□ -0.53
PTCH2-201ENST00000372192 CRADDP78560 199 aa11.73□□□□□ -0.53
PTCH2-201ENST00000372192 ARPINQ7Z6K5 226 aa11.73□□□□□ -0.53
PTCH2-201ENST00000372192 SCUBE3Q8IX30 993 aa11.73□□□□□ -0.53
PTCH2-201ENST00000372192 RYBPQ8N488 228 aaPredicted RBP11.73□□□□□ -0.53
PTCH2-201ENST00000372192 PTCD3Q96EY7 689 aaKnown RBP11.73□□□□□ -0.53
PTCH2-201ENST00000372192 CCDC138Q96M89 665 aa11.73□□□□□ -0.53
PTCH2-201ENST00000372192 ZNF670Q9BS34 389 aa11.73□□□□□ -0.53
PTCH2-201ENST00000372192 SPATA16Q9BXB7 569 aa11.73□□□□□ -0.53
PTCH2-201ENST00000372192 FAM49AQ9H0Q0 323 aaPredicted RBP11.73□□□□□ -0.53
PTCH2-201ENST00000372192 DEFB129Q9H1M3 183 aa11.73□□□□□ -0.53
PTCH2-201ENST00000372192 CCDC68Q9H2F9 335 aa11.73□□□□□ -0.53
PTCH2-201ENST00000372192 TSPYL2Q9H2G4 693 aaPredicted RBP11.73□□□□□ -0.53
PTCH2-201ENST00000372192 CDH22Q9UJ99 828 aa11.73□□□□□ -0.53
PTCH2-201ENST00000372192 FARP1Q9Y4F1 1045 aaPredicted RBP11.73□□□□□ -0.53
PTCH2-201ENST00000372192 SNX13Q9Y5W8 968 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms