RNA–Protein interactions for RNA: ENST00000222399.10

LAMB1-201, Transcript of laminin subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAMB1, Length 5,725 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-201ENST00000222399 DEFB128Q7Z7B8 93 aa13.94□□□□□ -0.18
LAMB1-201ENST00000222399 MTDHQ86UE4 582 aaKnown RBP13.94□□□□□ -0.18
LAMB1-201ENST00000222399 PHACTR4Q8IZ21 702 aa13.94□□□□□ -0.18
LAMB1-201ENST00000222399 SH3GL3Q99963 347 aa13.94□□□□□ -0.18
LAMB1-201ENST00000222399 HPS4Q9NQG7 708 aa13.94□□□□□ -0.18
LAMB1-201ENST00000222399 UXTQ9UBK9 157 aaPredicted RBP13.94□□□□□ -0.18
LAMB1-201ENST00000222399 VTI1BQ9UEU0 232 aa13.94□□□□□ -0.18
LAMB1-201ENST00000222399 ZNF711Q9Y462 761 aa13.94□□□□□ -0.18
LAMB1-201ENST00000222399 AK9Q5TCS8 1911 aa13.94□□□□□ -0.18
LAMB1-201ENST00000222399 GNG14A0A1W2PPG7 69 aa13.94□□□□□ -0.18
LAMB1-201ENST00000222399 UBDO15205 165 aa13.94□□□□□ -0.18
LAMB1-201ENST00000222399 MAP3K13O43283 966 aa13.94□□□□□ -0.18
LAMB1-201ENST00000222399 FCGR1AP12314 374 aa13.94□□□□□ -0.18
LAMB1-201ENST00000222399 MSH3P20585 1137 aa13.94□□□□□ -0.18
LAMB1-201ENST00000222399 CYP2A7P20853 494 aa13.94□□□□□ -0.18
LAMB1-201ENST00000222399 OR1E1P30953 314 aa13.94□□□□□ -0.18
LAMB1-201ENST00000222399 ERVK-9P63128 1117 aa13.94□□□□□ -0.18
LAMB1-201ENST00000222399 PLIN5Q00G26 463 aa13.94□□□□□ -0.18
LAMB1-201ENST00000222399 MAD2L1Q13257 205 aaPredicted RBP13.94□□□□□ -0.18
LAMB1-201ENST00000222399 NT5DC3Q86UY8 548 aa13.94□□□□□ -0.18
LAMB1-201ENST00000222399 MTMR9Q96QG7 549 aa13.94□□□□□ -0.18
LAMB1-201ENST00000222399 TMEM245Q9H330 911 aa13.94□□□□□ -0.18
LAMB1-201ENST00000222399 ANKZF1Q9H8Y5 726 aa13.94□□□□□ -0.18
LAMB1-201ENST00000222399 WDR41Q9HAD4 459 aa13.94□□□□□ -0.18
LAMB1-201ENST00000222399 XPNPEP3Q9NQH7 507 aa13.94□□□□□ -0.18
LAMB1-201ENST00000222399 PRR23D1E9PI22 279 aaPredicted RBP13.94□□□□□ -0.18
LAMB1-201ENST00000222399 PRR23D2P0DMB1 279 aaPredicted RBP13.94□□□□□ -0.18
LAMB1-201ENST00000222399 DNAJB2P25686 324 aa13.94□□□□□ -0.18
LAMB1-201ENST00000222399 NME5P56597 212 aa13.94□□□□□ -0.18
LAMB1-201ENST00000222399 ALDH6A1Q02252 535 aaKnown RBP13.94□□□□□ -0.18
LAMB1-201ENST00000222399 PRKAA1Q13131 559 aa13.94□□□□□ -0.18
LAMB1-201ENST00000222399 FAM171A1Q5VUB5 890 aa13.94□□□□□ -0.18
LAMB1-201ENST00000222399 CCDC81Q6ZN84 652 aa13.94□□□□□ -0.18
LAMB1-201ENST00000222399 ZNF438Q7Z4V0 828 aa13.94□□□□□ -0.18
LAMB1-201ENST00000222399 APLFQ8IW19 511 aaPredicted RBP13.94□□□□□ -0.18
LAMB1-201ENST00000222399 ZNF786Q8N393 782 aa13.94□□□□□ -0.18
LAMB1-201ENST00000222399 FAM136AQ96C01 138 aa13.94□□□□□ -0.18
LAMB1-201ENST00000222399 TBL1YQ9BQ87 522 aa13.94□□□□□ -0.18
LAMB1-201ENST00000222399 ATP13A1Q9HD20 1204 aa13.94□□□□□ -0.18
LAMB1-201ENST00000222399 WDR27A2RRH5 827 aa13.93□□□□□ -0.18
LAMB1-201ENST00000222399 E9PBE3 544 aa13.93□□□□□ -0.18
LAMB1-201ENST00000222399 EML1O00423 815 aa13.93□□□□□ -0.18
LAMB1-201ENST00000222399 KLHL41O60662 606 aa13.93□□□□□ -0.18
LAMB1-201ENST00000222399 RASSF9O75901 435 aa13.93□□□□□ -0.18
LAMB1-201ENST00000222399 PYGMP11217 842 aa13.93□□□□□ -0.18
LAMB1-201ENST00000222399 VAT1Q99536 393 aa13.93□□□□□ -0.18
LAMB1-201ENST00000222399 SIKE1Q9BRV8 207 aa13.93□□□□□ -0.18
LAMB1-201ENST00000222399 RBAK-RBAKDNI3L0D1 243 aa13.93□□□□□ -0.18
LAMB1-201ENST00000222399 RNF103O00237 685 aa13.93□□□□□ -0.18
LAMB1-201ENST00000222399 IFRD1O00458 451 aaPredicted RBP13.93□□□□□ -0.18
LAMB1-201ENST00000222399 DDX3XO00571 662 aaKnown RBP eCLIP13.93□□□□□ -0.183e-21■□□□□ 10.7
LAMB1-201ENST00000222399 CPSF4O95639 269 aaKnown RBP13.93□□□□□ -0.18
LAMB1-201ENST00000222399 KRT6AP02538 564 aa13.93□□□□□ -0.18
LAMB1-201ENST00000222399 KRT6BP04259 564 aa13.93□□□□□ -0.18
LAMB1-201ENST00000222399 SERPINE1P05121 402 aa13.93□□□□□ -0.18
LAMB1-201ENST00000222399 KRT6CP48668 564 aa13.93□□□□□ -0.18
LAMB1-201ENST00000222399 N4BP2L1Q5TBK1 243 aaPredicted RBP13.93□□□□□ -0.18
LAMB1-201ENST00000222399 DEFB106AQ8N104 65 aa13.93□□□□□ -0.18
LAMB1-201ENST00000222399 SLC2A14Q8TDB8 520 aa13.93□□□□□ -0.18
LAMB1-201ENST00000222399 SEMA4AQ9H3S1 761 aa13.93□□□□□ -0.18
LAMB1-201ENST00000222399 ACTR8Q9H981 624 aa13.93□□□□□ -0.18
LAMB1-201ENST00000222399 NMRAL1Q9HBL8 299 aa13.93□□□□□ -0.18
LAMB1-201ENST00000222399 CAPN10Q9HC96 672 aa13.93□□□□□ -0.18
LAMB1-201ENST00000222399 SNX13Q9Y5W8 968 aa13.93□□□□□ -0.18
LAMB1-201ENST00000222399 PTPN4P29074 926 aa13.93□□□□□ -0.18
LAMB1-201ENST00000222399 TBX2Q13207 712 aaPredicted RBP13.93□□□□□ -0.18
LAMB1-201ENST00000222399 MFSD4BQ5TF39 518 aa13.93□□□□□ -0.18
LAMB1-201ENST00000222399 MKL1Q969V6 931 aa13.93□□□□□ -0.18
LAMB1-201ENST00000222399 VPS33AQ96AX1 596 aa13.93□□□□□ -0.18
LAMB1-201ENST00000222399 APOPT1Q96IL0 206 aa13.93□□□□□ -0.18
LAMB1-201ENST00000222399 PORCNQ9H237 461 aa13.93□□□□□ -0.18
LAMB1-201ENST00000222399 RXFP1Q9HBX9 757 aa13.93□□□□□ -0.18
LAMB1-201ENST00000222399 TMEM114B3SHH9 223 aa13.93□□□□□ -0.18
LAMB1-201ENST00000222399 GHRP10912 638 aa13.93□□□□□ -0.18
LAMB1-201ENST00000222399 AMPD1P23109 780 aa13.93□□□□□ -0.18
LAMB1-201ENST00000222399 SLC1A6P48664 564 aa13.93□□□□□ -0.18
LAMB1-201ENST00000222399 FSCN1Q16658 493 aaKnown RBP13.93□□□□□ -0.18
LAMB1-201ENST00000222399 RIN3Q8TB24 985 aa13.93□□□□□ -0.18
LAMB1-201ENST00000222399 TRAPPC12Q8WVT3 735 aa13.93□□□□□ -0.18
LAMB1-201ENST00000222399 POPDC2Q9HBU9 364 aa13.93□□□□□ -0.18
LAMB1-201ENST00000222399 LRRC4BQ9NT99 713 aa13.93□□□□□ -0.18
LAMB1-201ENST00000222399 IL1RAPL1Q9NZN1 696 aa13.93□□□□□ -0.18
LAMB1-201ENST00000222399 DLGAP2Q9P1A6 1054 aa13.93□□□□□ -0.18
LAMB1-201ENST00000222399 RAD51BO15315 384 aa13.93□□□□□ -0.18
LAMB1-201ENST00000222399 DARSP14868 501 aaKnown RBP13.93□□□□□ -0.18
LAMB1-201ENST00000222399 ZNF7P17097 686 aaPredicted RBP13.93□□□□□ -0.18
LAMB1-201ENST00000222399 HNRNPH1P31943 449 aaKnown RBP13.93□□□□□ -0.18
LAMB1-201ENST00000222399 RPL21P46778 160 aaKnown RBP13.93□□□□□ -0.18
LAMB1-201ENST00000222399 SLC30A9Q6PML9 568 aa13.93□□□□□ -0.18
LAMB1-201ENST00000222399 C15orf52Q6ZUT6 534 aaKnown RBP13.93□□□□□ -0.18
LAMB1-201ENST00000222399 C10orf53Q8N6V4 93 aa13.93□□□□□ -0.18
LAMB1-201ENST00000222399 MRIQ9BWK5 157 aa13.93□□□□□ -0.18
LAMB1-201ENST00000222399 THG1LQ9NWX6 298 aaKnown RBP13.93□□□□□ -0.18
LAMB1-201ENST00000222399 UTP6Q9NYH9 597 aaKnown RBP13.93□□□□□ -0.18
LAMB1-201ENST00000222399 AP4S1Q9Y587 144 aa13.93□□□□□ -0.18
LAMB1-201ENST00000222399 A0A087X0B3 334 aa13.92□□□□□ -0.18
LAMB1-201ENST00000222399 PSMC3P17980 439 aa13.92□□□□□ -0.18
LAMB1-201ENST00000222399 MGAT1P26572 445 aa13.92□□□□□ -0.18
LAMB1-201ENST00000222399 HOXA10P31260 410 aaPredicted RBP13.92□□□□□ -0.18
LAMB1-201ENST00000222399 CCDC142Q17RM4 750 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms