RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 RBL1P28749 1068 aa3.47□□□□□ -1.85
TARDBP-220ENST00000618606 ARRB2P32121 409 aa3.47□□□□□ -1.85
TARDBP-220ENST00000618606 ACOX1Q15067 660 aa3.47□□□□□ -1.85
TARDBP-220ENST00000618606 AASDHQ4L235 1098 aaPredicted RBP3.47□□□□□ -1.85
TARDBP-220ENST00000618606 C9orf50Q5SZB4 431 aa3.47□□□□□ -1.85
TARDBP-220ENST00000618606 B4GALNT4Q76KP1 1039 aa3.47□□□□□ -1.85
TARDBP-220ENST00000618606 SKAP1Q86WV1 359 aa3.47□□□□□ -1.85
TARDBP-220ENST00000618606 RFX6Q8HWS3 928 aa3.47□□□□□ -1.85
TARDBP-220ENST00000618606 FOXP4Q8IVH2 680 aaPredicted RBP3.47□□□□□ -1.85
TARDBP-220ENST00000618606 SUN3Q8TAQ9 357 aa3.47□□□□□ -1.85
TARDBP-220ENST00000618606 STAG1Q8WVM7 1258 aa3.47□□□□□ -1.85
TARDBP-220ENST00000618606 ASB5Q8WWX0 329 aa3.47□□□□□ -1.85
TARDBP-220ENST00000618606 FAM84BQ96KN1 310 aaPredicted RBP3.47□□□□□ -1.85
TARDBP-220ENST00000618606 MEIS3Q99687 375 aa3.47□□□□□ -1.85
TARDBP-220ENST00000618606 MOV10Q9HCE1 1003 aaKnown RBP3.47□□□□□ -1.85
TARDBP-220ENST00000618606 PAPOLBQ9NRJ5 636 aaKnown RBP3.47□□□□□ -1.85
TARDBP-220ENST00000618606 SELENONQ9NZV5 590 aa3.47□□□□□ -1.85
TARDBP-220ENST00000618606 AGO2Q9UKV8 859 aaKnown RBP3.47□□□□□ -1.85
TARDBP-220ENST00000618606 CKAP5Q14008 2032 aa3.47□□□□□ -1.85
TARDBP-220ENST00000618606 A0A1W2PPC1 479 aa3.46□□□□□ -1.86
TARDBP-220ENST00000618606 PRPF3O43395 683 aaKnown RBP3.46□□□□□ -1.86
TARDBP-220ENST00000618606 WDR47O94967 919 aa3.46□□□□□ -1.86
TARDBP-220ENST00000618606 MYF5P13349 255 aa3.46□□□□□ -1.86
TARDBP-220ENST00000618606 PLA2G2AP14555 144 aa3.46□□□□□ -1.86
TARDBP-220ENST00000618606 TFEBP19484 476 aa3.46□□□□□ -1.86
TARDBP-220ENST00000618606 DUSP1P28562 367 aa3.46□□□□□ -1.86
TARDBP-220ENST00000618606 TNFRSF8P28908 595 aa3.46□□□□□ -1.86
TARDBP-220ENST00000618606 HOXD12P35452 270 aa3.46□□□□□ -1.86
TARDBP-220ENST00000618606 MTA1Q13330 715 aa3.46□□□□□ -1.86
TARDBP-220ENST00000618606 KCNJ12Q14500 433 aa3.46□□□□□ -1.86
TARDBP-220ENST00000618606 INPP5JQ15735 1006 aaPredicted RBP3.46□□□□□ -1.86
TARDBP-220ENST00000618606 GFI1BQ5VTD9 330 aa3.46□□□□□ -1.86
TARDBP-220ENST00000618606 PDXDC1Q6P996 788 aa3.46□□□□□ -1.86
TARDBP-220ENST00000618606 UNC13DQ70J99 1090 aa3.46□□□□□ -1.86
TARDBP-220ENST00000618606 SESTD1Q86VW0 696 aa3.46□□□□□ -1.86
TARDBP-220ENST00000618606 MBD3L2Q8NHZ7 208 aaPredicted RBP3.46□□□□□ -1.86
TARDBP-220ENST00000618606 APIPQ96GX9 242 aa3.46□□□□□ -1.86
TARDBP-220ENST00000618606 MSLNLQ96KJ4 702 aa3.46□□□□□ -1.86
TARDBP-220ENST00000618606 ABHD10Q9NUJ1 306 aa3.46□□□□□ -1.86
TARDBP-220ENST00000618606 ITGB1BP2Q9UKP3 347 aa3.46□□□□□ -1.86
TARDBP-220ENST00000618606 HPSEQ9Y251 543 aa3.46□□□□□ -1.86
TARDBP-220ENST00000618606 SPATA31A5Q5VU36 1347 aa3.45□□□□□ -1.86
TARDBP-220ENST00000618606 SPATA31A7Q8IWB4 1347 aa3.45□□□□□ -1.86
TARDBP-220ENST00000618606 PRYO14603 147 aa3.45□□□□□ -1.86
TARDBP-220ENST00000618606 PDGFRBP09619 1106 aa3.45□□□□□ -1.86
TARDBP-220ENST00000618606 ST6GAL1P15907 406 aa3.45□□□□□ -1.86
TARDBP-220ENST00000618606 CDC25AP30304 524 aa3.45□□□□□ -1.86
TARDBP-220ENST00000618606 SOX2P48431 317 aa3.45□□□□□ -1.86
TARDBP-220ENST00000618606 ZNF84P51523 738 aa3.45□□□□□ -1.86
TARDBP-220ENST00000618606 DGKQP52824 942 aa3.45□□□□□ -1.86
TARDBP-220ENST00000618606 P2RX3P56373 397 aa3.45□□□□□ -1.86
TARDBP-220ENST00000618606 RAE1P78406 368 aaKnown RBP3.45□□□□□ -1.86
TARDBP-220ENST00000618606 PTGR1Q14914 329 aa3.45□□□□□ -1.86
TARDBP-220ENST00000618606 CNGA3Q16281 694 aa3.45□□□□□ -1.86
TARDBP-220ENST00000618606 TTLL5Q6EMB2 1281 aa3.45□□□□□ -1.86
TARDBP-220ENST00000618606 CXorf57Q6NSI4 855 aaKnown RBP3.45□□□□□ -1.86
TARDBP-220ENST00000618606 UEVLDQ8IX04 471 aa3.45□□□□□ -1.86
TARDBP-220ENST00000618606 SDR16C5Q8N3Y7 309 aa3.45□□□□□ -1.86
TARDBP-220ENST00000618606 FSTL5Q8N475 847 aaPredicted RBP3.45□□□□□ -1.86
TARDBP-220ENST00000618606 IQCF1Q8N6M8 205 aa3.45□□□□□ -1.86
TARDBP-220ENST00000618606 IPCEF1Q8WWN9 437 aaPredicted RBP3.45□□□□□ -1.86
TARDBP-220ENST00000618606 DNASE2BQ8WZ79 361 aa3.45□□□□□ -1.86
TARDBP-220ENST00000618606 CELF1Q92879 486 aaKnown RBP3.45□□□□□ -1.86
TARDBP-220ENST00000618606 GJA10Q969M2 543 aa3.45□□□□□ -1.86
TARDBP-220ENST00000618606 SENP7Q9BQF6 1050 aa3.45□□□□□ -1.86
TARDBP-220ENST00000618606 NTPCRQ9BSD7 190 aaKnown RBP3.45□□□□□ -1.86
TARDBP-220ENST00000618606 RNF26Q9BY78 433 aaPredicted RBP3.45□□□□□ -1.86
TARDBP-220ENST00000618606 ARHGAP39Q9C0H5 1083 aa3.45□□□□□ -1.86
TARDBP-220ENST00000618606 LRRC27Q9C0I9 530 aa3.45□□□□□ -1.86
TARDBP-220ENST00000618606 FZD3Q9NPG1 666 aa3.45□□□□□ -1.86
TARDBP-220ENST00000618606 RXFP3Q9NSD7 469 aa3.45□□□□□ -1.86
TARDBP-220ENST00000618606 C1orf112Q9NSG2 853 aa3.45□□□□□ -1.86
TARDBP-220ENST00000618606 ZIM2Q9NZV7 527 aa3.45□□□□□ -1.86
TARDBP-220ENST00000618606 PCDHA7Q9UN72 937 aa3.45□□□□□ -1.86
TARDBP-220ENST00000618606 KIR2DS5A0A0G2JLQ3 304 aa3.44□□□□□ -1.86
TARDBP-220ENST00000618606 A6NNZ2 444 aa3.44□□□□□ -1.86
TARDBP-220ENST00000618606 KIR2DS3K7RE56 304 aa3.44□□□□□ -1.86
TARDBP-220ENST00000618606 UGDHO60701 494 aa3.44□□□□□ -1.86
TARDBP-220ENST00000618606 CBFA2T3O75081 653 aa3.44□□□□□ -1.86
TARDBP-220ENST00000618606 ZC3H11AO75152 810 aaKnown RBP eCLIP3.44□□□□□ -1.86
TARDBP-220ENST00000618606 U2AF1L5P0DN76 240 aaPredicted RBP3.44□□□□□ -1.86
TARDBP-220ENST00000618606 CARSP49589 748 aaKnown RBP3.44□□□□□ -1.86
TARDBP-220ENST00000618606 CACNB3P54284 484 aa3.44□□□□□ -1.86
TARDBP-220ENST00000618606 EPHB1P54762 984 aa3.44□□□□□ -1.86
TARDBP-220ENST00000618606 U2AF1Q01081 240 aaKnown RBP eCLIP3.44□□□□□ -1.86
TARDBP-220ENST00000618606 GAB1Q13480 694 aa3.44□□□□□ -1.86
TARDBP-220ENST00000618606 ASIC2Q16515 512 aa3.44□□□□□ -1.86
TARDBP-220ENST00000618606 ODF3L2Q3SX64 289 aa3.44□□□□□ -1.86
TARDBP-220ENST00000618606 PIK3CD-AS1Q5SR53 167 aa3.44□□□□□ -1.86
TARDBP-220ENST00000618606 RNF220Q5VTB9 566 aa3.44□□□□□ -1.86
TARDBP-220ENST00000618606 ZNF324BQ6AW86 544 aaPredicted RBP3.44□□□□□ -1.86
TARDBP-220ENST00000618606 FBXL22Q6P050 247 aa3.44□□□□□ -1.86
TARDBP-220ENST00000618606 P3H2Q8IVL5 708 aa3.44□□□□□ -1.86
TARDBP-220ENST00000618606 TMEM199Q8N511 208 aa3.44□□□□□ -1.86
TARDBP-220ENST00000618606 TMEM255BQ8WV15 326 aa3.44□□□□□ -1.86
TARDBP-220ENST00000618606 PIMREGQ9BSJ6 248 aa3.44□□□□□ -1.86
TARDBP-220ENST00000618606 MYLK2Q9H1R3 596 aa3.44□□□□□ -1.86
TARDBP-220ENST00000618606 ZNF287Q9HBT7 754 aa3.44□□□□□ -1.86
TARDBP-220ENST00000618606 THSD1Q9NS62 852 aa3.44□□□□□ -1.86
TARDBP-220ENST00000618606 GJB4Q9NTQ9 266 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms