RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 ABCB4P21439 1286 aa5.82□□□□□ -1.48
SCAMP1-205ENST00000614488 THBS4P35443 961 aa5.82□□□□□ -1.48
SCAMP1-205ENST00000614488 HSF1Q00613 529 aa5.82□□□□□ -1.48
SCAMP1-205ENST00000614488 KLF9Q13886 244 aaPredicted RBP5.82□□□□□ -1.48
SCAMP1-205ENST00000614488 KPNB1Q14974 876 aaKnown RBP5.82□□□□□ -1.48
SCAMP1-205ENST00000614488 TRIP6Q15654 476 aaKnown RBP5.82□□□□□ -1.48
SCAMP1-205ENST00000614488 CNGA3Q16281 694 aa5.82□□□□□ -1.48
SCAMP1-205ENST00000614488 ZNF425Q6IV72 752 aa5.82□□□□□ -1.48
SCAMP1-205ENST00000614488 PIK3AP1Q6ZUJ8 805 aa5.82□□□□□ -1.48
SCAMP1-205ENST00000614488 TTC30AQ86WT1 665 aa5.82□□□□□ -1.48
SCAMP1-205ENST00000614488 ACRBPQ8NEB7 543 aa5.82□□□□□ -1.48
SCAMP1-205ENST00000614488 CUL5Q93034 780 aa5.82□□□□□ -1.48
SCAMP1-205ENST00000614488 P2RY11Q96G91 374 aa5.82□□□□□ -1.48
SCAMP1-205ENST00000614488 EIF3CQ99613 913 aaKnown RBP5.82□□□□□ -1.48
SCAMP1-205ENST00000614488 ARFGAP3Q9NP61 516 aa5.82□□□□□ -1.48
SCAMP1-205ENST00000614488 TUBA8Q9NY65 449 aaPredicted RBP5.82□□□□□ -1.48
SCAMP1-205ENST00000614488 RNF7Q9UBF6 113 aa5.82□□□□□ -1.48
SCAMP1-205ENST00000614488 PI4KBQ9UBF8 816 aa5.82□□□□□ -1.48
SCAMP1-205ENST00000614488 SLC39A10Q9ULF5 831 aa5.82□□□□□ -1.48
SCAMP1-205ENST00000614488 SIRT4Q9Y6E7 314 aaPredicted RBP5.82□□□□□ -1.48
SCAMP1-205ENST00000614488 TTC34A8MYJ7 566 aa5.81□□□□□ -1.48
SCAMP1-205ENST00000614488 PCDH17O14917 1159 aa5.81□□□□□ -1.48
SCAMP1-205ENST00000614488 CTIFO43310 598 aaKnown RBP5.81□□□□□ -1.48
SCAMP1-205ENST00000614488 NTSR2O95665 410 aa5.81□□□□□ -1.48
SCAMP1-205ENST00000614488 TOP3BO95985 862 aaKnown RBP5.81□□□□□ -1.48
SCAMP1-205ENST00000614488 LMO1P25800 156 aa5.81□□□□□ -1.48
SCAMP1-205ENST00000614488 MMP13P45452 471 aa5.81□□□□□ -1.48
SCAMP1-205ENST00000614488 CFHR1Q03591 330 aa5.81□□□□□ -1.48
SCAMP1-205ENST00000614488 HDAC1Q13547 482 aaPredicted RBP5.81□□□□□ -1.48
SCAMP1-205ENST00000614488 CSHL1Q14406 222 aa5.81□□□□□ -1.48
SCAMP1-205ENST00000614488 C11orf87Q6NUJ2 197 aa5.81□□□□□ -1.48
SCAMP1-205ENST00000614488 ACSM6Q6P461 480 aa5.81□□□□□ -1.48
SCAMP1-205ENST00000614488 DEF8Q6ZN54 512 aa5.81□□□□□ -1.48
SCAMP1-205ENST00000614488 SKAP1Q86WV1 359 aa5.81□□□□□ -1.48
SCAMP1-205ENST00000614488 PRSS3P2Q8NHM4 247 aa5.81□□□□□ -1.48
SCAMP1-205ENST00000614488 GLMPQ8WWB7 406 aa5.81□□□□□ -1.48
SCAMP1-205ENST00000614488 PMM1Q92871 262 aa5.81□□□□□ -1.48
SCAMP1-205ENST00000614488 TMEM41AQ96HV5 264 aa5.81□□□□□ -1.48
SCAMP1-205ENST00000614488 PAAF1Q9BRP4 392 aa5.81□□□□□ -1.48
SCAMP1-205ENST00000614488 CDCP1Q9H5V8 836 aa5.81□□□□□ -1.48
SCAMP1-205ENST00000614488 KCNK9Q9NPC2 374 aa5.81□□□□□ -1.48
SCAMP1-205ENST00000614488 CHST12Q9NRB3 414 aa5.81□□□□□ -1.48
SCAMP1-205ENST00000614488 ARL8BQ9NVJ2 186 aa5.81□□□□□ -1.48
SCAMP1-205ENST00000614488 UBE2J1Q9Y385 318 aaPredicted RBP5.81□□□□□ -1.48
SCAMP1-205ENST00000614488 CCDC187A0A096LP49 1063 aa5.8□□□□□ -1.48
SCAMP1-205ENST00000614488 J3KTA2 159 aa5.8□□□□□ -1.48
SCAMP1-205ENST00000614488 TP73O15350 636 aa5.8□□□□□ -1.48
SCAMP1-205ENST00000614488 SLC3A2P08195 630 aaKnown RBP5.8□□□□□ -1.48
SCAMP1-205ENST00000614488 PPM1AP35813 382 aa5.8□□□□□ -1.48
SCAMP1-205ENST00000614488 TECP42680 631 aa5.8□□□□□ -1.48
SCAMP1-205ENST00000614488 ETFDHQ16134 617 aa5.8□□□□□ -1.48
SCAMP1-205ENST00000614488 FAM110CQ1W6H9 321 aa5.8□□□□□ -1.48
SCAMP1-205ENST00000614488 MSANTD2Q6P1R3 559 aa5.8□□□□□ -1.48
SCAMP1-205ENST00000614488 XRRA1Q6P2D8 792 aa5.8□□□□□ -1.48
SCAMP1-205ENST00000614488 UBE2Q1Q7Z7E8 422 aa5.8□□□□□ -1.48
SCAMP1-205ENST00000614488 SYTL1Q8IYJ3 562 aa5.8□□□□□ -1.48
SCAMP1-205ENST00000614488 AKAP1Q92667 903 aaKnown RBP eCLIP5.8□□□□□ -1.48
SCAMP1-205ENST00000614488 C18orf8Q96DM3 657 aa5.8□□□□□ -1.48
SCAMP1-205ENST00000614488 SENP7Q9BQF6 1050 aa5.8□□□□□ -1.48
SCAMP1-205ENST00000614488 TTLL2Q9BWV7 592 aa5.8□□□□□ -1.48
SCAMP1-205ENST00000614488 VPS16Q9H269 839 aa5.8□□□□□ -1.48
SCAMP1-205ENST00000614488 FSCN3Q9NQT6 498 aa5.8□□□□□ -1.48
SCAMP1-205ENST00000614488 SLC52A1Q9NWF4 448 aa5.8□□□□□ -1.48
SCAMP1-205ENST00000614488 VPS4AQ9UN37 437 aa5.8□□□□□ -1.48
SCAMP1-205ENST00000614488 PNMA6EA0A0J9YXQ4 647 aa5.79□□□□□ -1.48
SCAMP1-205ENST00000614488 PRYO14603 147 aa5.79□□□□□ -1.48
SCAMP1-205ENST00000614488 NPC1O15118 1278 aa5.79□□□□□ -1.48
SCAMP1-205ENST00000614488 INPPL1O15357 1258 aa5.79□□□□□ -1.48
SCAMP1-205ENST00000614488 USP12O75317 370 aa5.79□□□□□ -1.48
SCAMP1-205ENST00000614488 MOSPD3O75425 235 aa5.79□□□□□ -1.48
SCAMP1-205ENST00000614488 ITGA5P08648 1049 aa5.79□□□□□ -1.48
SCAMP1-205ENST00000614488 NPPBP16860 134 aa5.79□□□□□ -1.48
SCAMP1-205ENST00000614488 NDUFS1P28331 727 aa5.79□□□□□ -1.48
SCAMP1-205ENST00000614488 PTGER1P34995 402 aa5.79□□□□□ -1.48
SCAMP1-205ENST00000614488 HOXD12P35452 270 aa5.79□□□□□ -1.48
SCAMP1-205ENST00000614488 HTR3AP46098 478 aa5.79□□□□□ -1.48
SCAMP1-205ENST00000614488 YPEL5P62699 121 aa5.79□□□□□ -1.48
SCAMP1-205ENST00000614488 CBFBQ13951 182 aa5.79□□□□□ -1.48
SCAMP1-205ENST00000614488 TRIM71Q2Q1W2 868 aaKnown RBP5.79□□□□□ -1.48
SCAMP1-205ENST00000614488 P3H1Q32P28 736 aa5.79□□□□□ -1.48
SCAMP1-205ENST00000614488 Q4G0T1 1027 aa5.79□□□□□ -1.48
SCAMP1-205ENST00000614488 TOGARAM2Q6ZUX3 1019 aa5.79□□□□□ -1.48
SCAMP1-205ENST00000614488 IPO4Q8TEX9 1081 aaKnown RBP5.79□□□□□ -1.48
SCAMP1-205ENST00000614488 MUL1Q969V5 352 aa5.79□□□□□ -1.48
SCAMP1-205ENST00000614488 COQ8BQ96D53 544 aa5.79□□□□□ -1.48
SCAMP1-205ENST00000614488 SIGLEC11Q96RL6 698 aa5.79□□□□□ -1.48
SCAMP1-205ENST00000614488 TMEM79Q9BSE2 394 aa5.79□□□□□ -1.48
SCAMP1-205ENST00000614488 FBXO28Q9NVF7 368 aa5.79□□□□□ -1.48
SCAMP1-205ENST00000614488 GOLGA6L3A6NEY3 463 aa5.78□□□□□ -1.48
SCAMP1-205ENST00000614488 C16orf96A6NNT2 1141 aa5.78□□□□□ -1.48
SCAMP1-205ENST00000614488 RRHO14718 337 aa5.78□□□□□ -1.48
SCAMP1-205ENST00000614488 TAF5LO75529 589 aa5.78□□□□□ -1.48
SCAMP1-205ENST00000614488 PLAUP00749 431 aa5.78□□□□□ -1.48
SCAMP1-205ENST00000614488 ANXA6P08133 673 aa5.78□□□□□ -1.48
SCAMP1-205ENST00000614488 ALADP13716 330 aa5.78□□□□□ -1.48
SCAMP1-205ENST00000614488 RPS13P62277 151 aaKnown RBP5.78□□□□□ -1.48
SCAMP1-205ENST00000614488 STARD3Q14849 445 aa5.78□□□□□ -1.48
SCAMP1-205ENST00000614488 ELF2Q15723 593 aa5.78□□□□□ -1.48
SCAMP1-205ENST00000614488 SYCP2LQ5T4T6 812 aa5.78□□□□□ -1.48
SCAMP1-205ENST00000614488 PXDC1Q5TGL8 231 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms