RNA–Protein interactions for RNA: ENST00000613177.1

TARDBP-214, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-214ENST00000613177 PRYO14603 147 aa4.43□□□□□ -1.7
TARDBP-214ENST00000613177 WDR47O94967 919 aa4.43□□□□□ -1.7
TARDBP-214ENST00000613177 INMTO95050 263 aa4.43□□□□□ -1.7
TARDBP-214ENST00000613177 SOX2P48431 317 aa4.43□□□□□ -1.7
TARDBP-214ENST00000613177 PTGR1Q14914 329 aa4.43□□□□□ -1.7
TARDBP-214ENST00000613177 ACOX1Q15067 660 aa4.43□□□□□ -1.7
TARDBP-214ENST00000613177 RFX6Q8HWS3 928 aa4.43□□□□□ -1.7
TARDBP-214ENST00000613177 TMEM199Q8N511 208 aa4.43□□□□□ -1.7
TARDBP-214ENST00000613177 ZBTB8BQ8NAP8 495 aaPredicted RBP4.43□□□□□ -1.7
TARDBP-214ENST00000613177 FAM227BQ96M60 508 aa4.43□□□□□ -1.7
TARDBP-214ENST00000613177 RNF26Q9BY78 433 aaPredicted RBP4.43□□□□□ -1.7
TARDBP-214ENST00000613177 ZCWPW1Q9H0M4 648 aa4.43□□□□□ -1.7
TARDBP-214ENST00000613177 MYLK2Q9H1R3 596 aa4.43□□□□□ -1.7
TARDBP-214ENST00000613177 THSD1Q9NS62 852 aa4.43□□□□□ -1.7
TARDBP-214ENST00000613177 TXLNGQ9NUQ3 528 aa4.43□□□□□ -1.7
TARDBP-214ENST00000613177 MDFICQ9P1T7 246 aa4.43□□□□□ -1.7
TARDBP-214ENST00000613177 TPCN1Q9ULQ1 816 aa4.43□□□□□ -1.7
TARDBP-214ENST00000613177 PCDHA7Q9UN72 937 aa4.43□□□□□ -1.7
TARDBP-214ENST00000613177 HPSEQ9Y251 543 aa4.43□□□□□ -1.7
TARDBP-214ENST00000613177 SHROOM4Q9ULL8 1493 aa4.43□□□□□ -1.7
TARDBP-214ENST00000613177 hCG_2014768A0A024R1R8 64 aa4.42□□□□□ -1.7
TARDBP-214ENST00000613177 ZKSCAN1P17029 563 aaPredicted RBP4.42□□□□□ -1.7
TARDBP-214ENST00000613177 CDC25AP30304 524 aa4.42□□□□□ -1.7
TARDBP-214ENST00000613177 ANAPC15P60006 121 aa4.42□□□□□ -1.7
TARDBP-214ENST00000613177 GAB1Q13480 694 aa4.42□□□□□ -1.7
TARDBP-214ENST00000613177 CNGA3Q16281 694 aa4.42□□□□□ -1.7
TARDBP-214ENST00000613177 KRTAP27-1Q3LI81 207 aa4.42□□□□□ -1.7
TARDBP-214ENST00000613177 UNC13DQ70J99 1090 aa4.42□□□□□ -1.7
TARDBP-214ENST00000613177 SESTD1Q86VW0 696 aa4.42□□□□□ -1.7
TARDBP-214ENST00000613177 P3H2Q8IVL5 708 aa4.42□□□□□ -1.7
TARDBP-214ENST00000613177 FSTL5Q8N475 847 aaPredicted RBP4.42□□□□□ -1.7
TARDBP-214ENST00000613177 SUN3Q8TAQ9 357 aa4.42□□□□□ -1.7
TARDBP-214ENST00000613177 PIMREGQ9BSJ6 248 aa4.42□□□□□ -1.7
TARDBP-214ENST00000613177 DDX56Q9NY93 547 aaKnown RBP4.42□□□□□ -1.7
TARDBP-214ENST00000613177 HEMK1Q9Y5R4 338 aaPredicted RBP4.42□□□□□ -1.7
TARDBP-214ENST00000613177 KIR2DS5A0A0G2JLQ3 304 aa4.41□□□□□ -1.7
TARDBP-214ENST00000613177 A6NNZ2 444 aa4.41□□□□□ -1.7
TARDBP-214ENST00000613177 KIR2DS3K7RE56 304 aa4.41□□□□□ -1.7
TARDBP-214ENST00000613177 PRPF4O43172 522 aaKnown RBP eCLIP4.41□□□□□ -1.7
TARDBP-214ENST00000613177 PRPF3O43395 683 aaKnown RBP4.41□□□□□ -1.7
TARDBP-214ENST00000613177 UGDHO60701 494 aa4.41□□□□□ -1.7
TARDBP-214ENST00000613177 CBFA2T3O75081 653 aa4.41□□□□□ -1.7
TARDBP-214ENST00000613177 DUSP1P28562 367 aa4.41□□□□□ -1.7
TARDBP-214ENST00000613177 HOXD12P35452 270 aa4.41□□□□□ -1.7
TARDBP-214ENST00000613177 CARSP49589 748 aaKnown RBP4.41□□□□□ -1.7
TARDBP-214ENST00000613177 IGBP1P78318 339 aa4.41□□□□□ -1.7
TARDBP-214ENST00000613177 KCNJ12Q14500 433 aa4.41□□□□□ -1.7
TARDBP-214ENST00000613177 ASPHD1Q5U4P2 390 aa4.41□□□□□ -1.7
TARDBP-214ENST00000613177 SPATA2LQ8IUW3 424 aaPredicted RBP4.41□□□□□ -1.7
TARDBP-214ENST00000613177 STAG1Q8WVM7 1258 aa4.41□□□□□ -1.7
TARDBP-214ENST00000613177 CELF1Q92879 486 aaKnown RBP4.41□□□□□ -1.7
TARDBP-214ENST00000613177 GJA10Q969M2 543 aa4.41□□□□□ -1.7
TARDBP-214ENST00000613177 MSLNLQ96KJ4 702 aa4.41□□□□□ -1.7
TARDBP-214ENST00000613177 FZD3Q9NPG1 666 aa4.41□□□□□ -1.7
TARDBP-214ENST00000613177 ASNSD1Q9NWL6 643 aa4.41□□□□□ -1.7
TARDBP-214ENST00000613177 IFITM10A6NMD0 228 aa4.4□□□□□ -1.71
TARDBP-214ENST00000613177 ZC3H11AO75152 810 aaKnown RBP eCLIP4.4□□□□□ -1.711e-7■■□□□ 12
TARDBP-214ENST00000613177 NDUFS1P28331 727 aa4.4□□□□□ -1.71
TARDBP-214ENST00000613177 PBX1P40424 430 aa4.4□□□□□ -1.71
TARDBP-214ENST00000613177 VPS41P49754 854 aa4.4□□□□□ -1.71
TARDBP-214ENST00000613177 ZNF84P51523 738 aa4.4□□□□□ -1.71
TARDBP-214ENST00000613177 KEAP1Q14145 624 aa4.4□□□□□ -1.71
TARDBP-214ENST00000613177 SMTNL2Q2TAL5 461 aa4.4□□□□□ -1.71
TARDBP-214ENST00000613177 PIK3CD-AS1Q5SR53 167 aa4.4□□□□□ -1.71
TARDBP-214ENST00000613177 CAPRIN2Q6IMN6 1127 aaKnown RBP4.4□□□□□ -1.71
TARDBP-214ENST00000613177 PDXDC1Q6P996 788 aa4.4□□□□□ -1.71
TARDBP-214ENST00000613177 TRAPPC11Q7Z392 1133 aa4.4□□□□□ -1.71
TARDBP-214ENST00000613177 RBM23Q86U06 439 aaKnown RBP4.4□□□□□ -1.71
TARDBP-214ENST00000613177 UEVLDQ8IX04 471 aa4.4□□□□□ -1.71
TARDBP-214ENST00000613177 FBXL14Q8N1E6 418 aa4.4□□□□□ -1.71
TARDBP-214ENST00000613177 IQCF1Q8N6M8 205 aa4.4□□□□□ -1.71
TARDBP-214ENST00000613177 SENP7Q9BQF6 1050 aa4.4□□□□□ -1.71
TARDBP-214ENST00000613177 AS3MTQ9HBK9 375 aa4.4□□□□□ -1.71
TARDBP-214ENST00000613177 ITGB1BP2Q9UKP3 347 aa4.4□□□□□ -1.71
TARDBP-214ENST00000613177 ZNF335Q9H4Z2 1342 aaPredicted RBP4.4□□□□□ -1.71
TARDBP-214ENST00000613177 ERVV-2B6SEH9 535 aa4.39□□□□□ -1.71
TARDBP-214ENST00000613177 PDGFRBP09619 1106 aa4.39□□□□□ -1.71
TARDBP-214ENST00000613177 FGF3P11487 239 aaPredicted RBP4.39□□□□□ -1.71
TARDBP-214ENST00000613177 HOXA11P31270 313 aaPredicted RBP4.39□□□□□ -1.71
TARDBP-214ENST00000613177 DGKQP52824 942 aa4.39□□□□□ -1.71
TARDBP-214ENST00000613177 LTBQ06643 244 aa4.39□□□□□ -1.71
TARDBP-214ENST00000613177 PGM5Q15124 567 aa4.39□□□□□ -1.71
TARDBP-214ENST00000613177 DLGAP5Q15398 846 aa4.39□□□□□ -1.71
TARDBP-214ENST00000613177 ADGRF4Q8IZF3 695 aa4.39□□□□□ -1.71
TARDBP-214ENST00000613177 AKAP1Q92667 903 aaKnown RBP eCLIP4.39□□□□□ -1.71
TARDBP-214ENST00000613177 NEUROG1Q92886 237 aa4.39□□□□□ -1.71
TARDBP-214ENST00000613177 ATP2A3Q93084 1043 aa4.39□□□□□ -1.71
TARDBP-214ENST00000613177 EME1Q96AY2 570 aa4.39□□□□□ -1.71
TARDBP-214ENST00000613177 APIPQ96GX9 242 aa4.39□□□□□ -1.71
TARDBP-214ENST00000613177 WDR24Q96S15 920 aa4.39□□□□□ -1.71
TARDBP-214ENST00000613177 NTPCRQ9BSD7 190 aaKnown RBP4.39□□□□□ -1.71
TARDBP-214ENST00000613177 TTLL2Q9BWV7 592 aa4.39□□□□□ -1.71
TARDBP-214ENST00000613177 RBM38Q9H0Z9 239 aaKnown RBP4.39□□□□□ -1.71
TARDBP-214ENST00000613177 ZIM2Q9NZV7 527 aa4.39□□□□□ -1.71
TARDBP-214ENST00000613177 ANAPC4Q9UJX5 808 aa4.39□□□□□ -1.71
TARDBP-214ENST00000613177 OGDHLQ9ULD0 1010 aa4.39□□□□□ -1.71
TARDBP-214ENST00000613177 PCDHB2Q9Y5E7 798 aa4.39□□□□□ -1.71
TARDBP-214ENST00000613177 SPATA31A5Q5VU36 1347 aa4.39□□□□□ -1.71
TARDBP-214ENST00000613177 SPATA31A7Q8IWB4 1347 aa4.39□□□□□ -1.71
TARDBP-214ENST00000613177 A6NNC1 897 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms