RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 CHST13Q8NET6 341 aa13.39□□□□□ -0.27
RNF43-208ENST00000584437 SEPHS2Q99611 448 aa13.39□□□□□ -0.27
RNF43-208ENST00000584437 DYTNA2CJ06 578 aa13.38□□□□□ -0.27
RNF43-208ENST00000584437 MEI4A8MW99 385 aa13.38□□□□□ -0.27
RNF43-208ENST00000584437 TMEM114B3SHH9 223 aa13.38□□□□□ -0.27
RNF43-208ENST00000584437 SNPHO15079 494 aa13.38□□□□□ -0.27
RNF43-208ENST00000584437 COX10Q12887 443 aa13.38□□□□□ -0.27
RNF43-208ENST00000584437 TOP3AQ13472 1001 aaPredicted RBP13.38□□□□□ -0.27
RNF43-208ENST00000584437 TIMM50Q3ZCQ8 353 aa13.38□□□□□ -0.27
RNF43-208ENST00000584437 USP39Q53GS9 565 aaKnown RBP13.38□□□□□ -0.27
RNF43-208ENST00000584437 OTUD3Q5T2D3 398 aaPredicted RBP13.38□□□□□ -0.27
RNF43-208ENST00000584437 SNX32Q86XE0 403 aa13.38□□□□□ -0.27
RNF43-208ENST00000584437 CAMK1DQ8IU85 385 aa13.38□□□□□ -0.27
RNF43-208ENST00000584437 TAS1R2Q8TE23 839 aa13.38□□□□□ -0.27
RNF43-208ENST00000584437 PIDD1Q9HB75 910 aa13.38□□□□□ -0.27
RNF43-208ENST00000584437 TBC1D13Q9NVG8 400 aa13.38□□□□□ -0.27
RNF43-208ENST00000584437 CORO1CQ9ULV4 474 aaPredicted RBP13.38□□□□□ -0.27
RNF43-208ENST00000584437 RRN3P2A6NIE6 340 aa13.38□□□□□ -0.27
RNF43-208ENST00000584437 FAM220BPB1ANY3 271 aa13.38□□□□□ -0.27
RNF43-208ENST00000584437 GLP2RO95838 553 aa13.38□□□□□ -0.27
RNF43-208ENST00000584437 MSH3P20585 1137 aa13.38□□□□□ -0.27
RNF43-208ENST00000584437 NPTX2P47972 431 aa13.38□□□□□ -0.27
RNF43-208ENST00000584437 CNGA2Q16280 664 aa13.38□□□□□ -0.27
RNF43-208ENST00000584437 KCTD21Q4G0X4 260 aa13.38□□□□□ -0.27
RNF43-208ENST00000584437 C2CD6Q53TS8 623 aa13.38□□□□□ -0.27
RNF43-208ENST00000584437 FAM182BQ5T319 152 aa13.38□□□□□ -0.27
RNF43-208ENST00000584437 MARK2Q7KZI7 788 aaKnown RBP13.38□□□□□ -0.27
RNF43-208ENST00000584437 DDX53Q86TM3 631 aaKnown RBP13.38□□□□□ -0.27
RNF43-208ENST00000584437 WDR49Q8IV35 697 aa13.38□□□□□ -0.27
RNF43-208ENST00000584437 ASB2Q96Q27 587 aa13.38□□□□□ -0.27
RNF43-208ENST00000584437 LRMDAQ9H2I8 198 aa13.38□□□□□ -0.27
RNF43-208ENST00000584437 TRPC7Q9HCX4 862 aa13.38□□□□□ -0.27
RNF43-208ENST00000584437 SPATA2Q9UM82 520 aa13.38□□□□□ -0.27
RNF43-208ENST00000584437 DUSP12Q9UNI6 340 aa13.38□□□□□ -0.27
RNF43-208ENST00000584437 KLHL20Q9Y2M5 609 aa13.38□□□□□ -0.27
RNF43-208ENST00000584437 PIPSLA2A3N6 862 aa13.38□□□□□ -0.27
RNF43-208ENST00000584437 KATNA1O75449 491 aa13.38□□□□□ -0.27
RNF43-208ENST00000584437 NR1H2P55055 460 aa13.38□□□□□ -0.27
RNF43-208ENST00000584437 NR6A1Q15406 480 aa13.38□□□□□ -0.27
RNF43-208ENST00000584437 RGS21Q2M5E4 152 aa13.38□□□□□ -0.27
RNF43-208ENST00000584437 PGS1Q32NB8 556 aa13.38□□□□□ -0.27
RNF43-208ENST00000584437 FAM151AQ8WW52 585 aa13.38□□□□□ -0.27
RNF43-208ENST00000584437 MTMR12Q9C0I1 747 aa13.38□□□□□ -0.27
RNF43-208ENST00000584437 MADDQ8WXG6 1647 aa13.38□□□□□ -0.27
RNF43-208ENST00000584437 MGAT4DA6NG13 374 aa13.38□□□□□ -0.27
RNF43-208ENST00000584437 CD3EAPO15446 510 aaKnown RBP13.38□□□□□ -0.27
RNF43-208ENST00000584437 MAPK11Q15759 364 aa13.38□□□□□ -0.27
RNF43-208ENST00000584437 PKN1Q16512 942 aa13.38□□□□□ -0.27
RNF43-208ENST00000584437 STK32CQ86UX6 486 aa13.38□□□□□ -0.27
RNF43-208ENST00000584437 LRRC71Q8N4P6 559 aa13.38□□□□□ -0.27
RNF43-208ENST00000584437 PRKD2Q9BZL6 878 aa13.38□□□□□ -0.27
RNF43-208ENST00000584437 GRIP2Q9C0E4 1043 aa13.38□□□□□ -0.27
RNF43-208ENST00000584437 CLPBQ9H078 707 aa13.38□□□□□ -0.27
RNF43-208ENST00000584437 HDHD2Q9H0R4 259 aa13.38□□□□□ -0.27
RNF43-208ENST00000584437 ARMCX1Q9P291 453 aa13.38□□□□□ -0.27
RNF43-208ENST00000584437 PNMA8BQ9ULN7 279 aaPredicted RBP13.38□□□□□ -0.27
RNF43-208ENST00000584437 KBTBD13C9JR72 458 aa13.37□□□□□ -0.27
RNF43-208ENST00000584437 ALOX12P18054 663 aa13.37□□□□□ -0.27
RNF43-208ENST00000584437 RPL5P46777 297 aaKnown RBP13.37□□□□□ -0.27
RNF43-208ENST00000584437 CDC16Q13042 620 aa13.37□□□□□ -0.27
RNF43-208ENST00000584437 MSLNQ13421 630 aaPredicted RBP13.37□□□□□ -0.27
RNF43-208ENST00000584437 DDX39BQ13838 428 aaKnown RBP13.37□□□□□ -0.27
RNF43-208ENST00000584437 NFIXQ14938 502 aa13.37□□□□□ -0.27
RNF43-208ENST00000584437 NTRK3Q16288 839 aa13.37□□□□□ -0.27
RNF43-208ENST00000584437 MPZL3Q6UWV2 235 aa13.37□□□□□ -0.27
RNF43-208ENST00000584437 POU5F2Q8N7G0 328 aa13.37□□□□□ -0.27
RNF43-208ENST00000584437 RXFP2Q8WXD0 754 aa13.37□□□□□ -0.27
RNF43-208ENST00000584437 DPY30Q9C005 99 aa13.37□□□□□ -0.27
RNF43-208ENST00000584437 ALKQ9UM73 1620 aa13.37□□□□□ -0.27
RNF43-208ENST00000584437 IQSEC2Q5JU85 1478 aa13.37□□□□□ -0.27
RNF43-208ENST00000584437 LRRC10BA6NIK2 292 aa13.37□□□□□ -0.27
RNF43-208ENST00000584437 SLC25A27O95847 323 aa13.37□□□□□ -0.27
RNF43-208ENST00000584437 PROCP04070 461 aa13.37□□□□□ -0.27
RNF43-208ENST00000584437 MYL4P12829 197 aa13.37□□□□□ -0.27
RNF43-208ENST00000584437 DNAJB2P25686 324 aa13.37□□□□□ -0.27
RNF43-208ENST00000584437 NPY2RP49146 381 aa13.37□□□□□ -0.27
RNF43-208ENST00000584437 CDH17Q12864 832 aa13.37□□□□□ -0.27
RNF43-208ENST00000584437 C10orf120Q5SQS8 335 aa13.37□□□□□ -0.27
RNF43-208ENST00000584437 ZNF618Q5T7W0 954 aa13.37□□□□□ -0.27
RNF43-208ENST00000584437 CCDC33Q8N5R6 958 aa13.37□□□□□ -0.27
RNF43-208ENST00000584437 KIAA0895Q8NCT3 520 aa13.37□□□□□ -0.27
RNF43-208ENST00000584437 MCRS1Q96EZ8 462 aa13.37□□□□□ -0.27
RNF43-208ENST00000584437 FICDQ9BVA6 458 aa13.37□□□□□ -0.27
RNF43-208ENST00000584437 PLGRKTQ9HBL7 147 aa13.37□□□□□ -0.27
RNF43-208ENST00000584437 GPATCH2LQ9NWQ4 482 aa13.37□□□□□ -0.27
RNF43-208ENST00000584437 C6orf203Q9P0P8 240 aaPredicted RBP13.37□□□□□ -0.27
RNF43-208ENST00000584437 AFF2P51816 1311 aa13.37□□□□□ -0.27
RNF43-208ENST00000584437 PRR23AA6NEV1 266 aa13.37□□□□□ -0.27
RNF43-208ENST00000584437 PLA2G6O60733 806 aa13.37□□□□□ -0.27
RNF43-208ENST00000584437 MAP3K6O95382 1288 aa13.37□□□□□ -0.27
RNF43-208ENST00000584437 KRT6AP02538 564 aa13.37□□□□□ -0.27
RNF43-208ENST00000584437 RPS7P62081 194 aaKnown RBP13.37□□□□□ -0.27
RNF43-208ENST00000584437 ZDHHC13Q8IUH4 622 aa13.37□□□□□ -0.27
RNF43-208ENST00000584437 HPS4Q9NQG7 708 aa13.37□□□□□ -0.27
RNF43-208ENST00000584437 NCF1BA6NI72 391 aaPredicted RBP13.37□□□□□ -0.27
RNF43-208ENST00000584437 NCF1CA8MVU1 366 aaPredicted RBP13.37□□□□□ -0.27
RNF43-208ENST00000584437 DCXO43602 365 aa13.37□□□□□ -0.27
RNF43-208ENST00000584437 NPTXRO95502 500 aa13.37□□□□□ -0.27
RNF43-208ENST00000584437 NCF1P14598 390 aaPredicted RBP13.37□□□□□ -0.27
RNF43-208ENST00000584437 ETS1P14921 441 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms