RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 DENND2DQ9H6A0 471 aaPredicted RBP3.71□□□□□ -1.82
SMG6-208ENST00000570874 BCAS3Q9H6U6 928 aa3.71□□□□□ -1.82
SMG6-208ENST00000570874 TTC12Q9H892 705 aaPredicted RBP3.71□□□□□ -1.82
SMG6-208ENST00000570874 RAVER2Q9HCJ3 691 aaKnown RBP3.71□□□□□ -1.82
SMG6-208ENST00000570874 POLMQ9NP87 494 aaPredicted RBP3.71□□□□□ -1.82
SMG6-208ENST00000570874 MID1IP1Q9NPA3 183 aa3.71□□□□□ -1.82
SMG6-208ENST00000570874 ATP13A2Q9NQ11 1180 aa3.71□□□□□ -1.82
SMG6-208ENST00000570874 ARHGEF4Q9NR80 690 aa3.71□□□□□ -1.82
SMG6-208ENST00000570874 KCND1Q9NSA2 647 aa3.71□□□□□ -1.82
SMG6-208ENST00000570874 ATAD3AQ9NVI7 634 aa3.71□□□□□ -1.82
SMG6-208ENST00000570874 ANO10Q9NW15 660 aa3.71□□□□□ -1.82
SMG6-208ENST00000570874 COQ3Q9NZJ6 369 aa3.71□□□□□ -1.82
SMG6-208ENST00000570874 HSPBP1Q9NZL4 362 aa3.71□□□□□ -1.82
SMG6-208ENST00000570874 EMC3Q9P0I2 261 aa3.71□□□□□ -1.82
SMG6-208ENST00000570874 PKD2L1Q9P0L9 805 aa3.71□□□□□ -1.82
SMG6-208ENST00000570874 LRFN1Q9P244 771 aa3.71□□□□□ -1.82
SMG6-208ENST00000570874 FETUBQ9UGM5 382 aa3.71□□□□□ -1.82
SMG6-208ENST00000570874 DDX25Q9UHL0 483 aaKnown RBP3.71□□□□□ -1.82
SMG6-208ENST00000570874 FOXD3Q9UJU5 478 aaPredicted RBP3.71□□□□□ -1.82
SMG6-208ENST00000570874 ZMYND8Q9ULU4 1186 aaPredicted RBP3.71□□□□□ -1.82
SMG6-208ENST00000570874 L1RE1Q9UN81 338 aa3.71□□□□□ -1.82
SMG6-208ENST00000570874 TRIM33Q9UPN9 1127 aa3.71□□□□□ -1.82
SMG6-208ENST00000570874 CTNND2Q9UQB3 1225 aa3.71□□□□□ -1.82
SMG6-208ENST00000570874 RIPK3Q9Y572 518 aa3.71□□□□□ -1.82
SMG6-208ENST00000570874 PCDHB11Q9Y5F2 797 aa3.71□□□□□ -1.82
SMG6-208ENST00000570874 PCDHGA9Q9Y5G4 932 aaKnown RBP3.71□□□□□ -1.82
SMG6-208ENST00000570874 PCDHGA8Q9Y5G5 932 aa3.71□□□□□ -1.82
SMG6-208ENST00000570874 PCDHGA7Q9Y5G6 932 aa3.71□□□□□ -1.82
SMG6-208ENST00000570874 PCDHGA6Q9Y5G7 932 aa3.71□□□□□ -1.82
SMG6-208ENST00000570874 PCDHGA3Q9Y5H0 932 aa3.71□□□□□ -1.82
SMG6-208ENST00000570874 PCDHGA2Q9Y5H1 932 aa3.71□□□□□ -1.82
SMG6-208ENST00000570874 PCDHGA1Q9Y5H4 931 aa3.71□□□□□ -1.82
SMG6-208ENST00000570874 SPO11Q9Y5K1 396 aa3.71□□□□□ -1.82
SMG6-208ENST00000570874 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.71□□□□□ -1.82
SMG6-208ENST00000570874 ABCB11O95342 1321 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 NPHP3-ACAD11A0A0J9YXS1 232 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 OR6C65A6NJZ3 312 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 CAPN14A8MX76 684 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 NUDT19A8MXV4 375 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 E9PMD0 336 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 H3BML4 177 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 STX16-NPEPL1H3BU86 382 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 RBAK-RBAKDNI3L0D1 243 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 NDUFS8O00217 210 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 EML1O00423 815 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 E2F3O00716 465 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 WDR46O15213 610 aaKnown RBP3.7□□□□□ -1.82
SMG6-208ENST00000570874 NKRFO15226 690 aaKnown RBP eCLIP3.7□□□□□ -1.82
SMG6-208ENST00000570874 BUB1O43683 1085 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 MED24O75448 989 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 ERAL1O75616 437 aaKnown RBP3.7□□□□□ -1.82
SMG6-208ENST00000570874 PPM1BO75688 479 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 FLOT1O75955 427 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 BMP15O95972 392 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 LRG1P02750 347 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 DLDP09622 509 aaKnown RBP3.7□□□□□ -1.82
SMG6-208ENST00000570874 ZNF865P0CJ78 1059 aaPredicted RBP3.7□□□□□ -1.82
SMG6-208ENST00000570874 TROVE2P10155 538 aaKnown RBP eCLIP3.7□□□□□ -1.82
SMG6-208ENST00000570874 ARP10275 920 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 FCER1AP12319 257 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 HPGDP15428 266 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 VAV1P15498 845 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 TFE3P19532 575 aaPredicted RBP3.7□□□□□ -1.82
SMG6-208ENST00000570874 ACAT1P24752 427 aaKnown RBP3.7□□□□□ -1.82
SMG6-208ENST00000570874 HNF1BP35680 557 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 SREBF1P36956 1147 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 THPOP40225 353 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 ADCYAP1R1P41586 468 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 STAT6P42226 847 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 STAT5AP42229 794 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 LSSP48449 732 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 ALDH9A1P49189 494 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 MNAT1P51948 309 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 MRPL12P52815 198 aaKnown RBP3.7□□□□□ -1.82
SMG6-208ENST00000570874 YBEYP58557 167 aaPredicted RBP3.7□□□□□ -1.82
SMG6-208ENST00000570874 TUBB4BP68371 445 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 RPP38P78345 283 aaKnown RBP3.7□□□□□ -1.82
SMG6-208ENST00000570874 KCNJ10P78508 379 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 CLCQ05315 142 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 SPIRE1Q08AE8 756 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 VGLL4Q14135 290 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 DHX34Q14147 1143 aaKnown RBP3.7□□□□□ -1.82
SMG6-208ENST00000570874 PTK2BQ14289 1009 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 POLD3Q15054 466 aaPredicted RBP3.7□□□□□ -1.82
SMG6-208ENST00000570874 SURF1Q15526 300 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 DPYSL2Q16555 572 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 ERCC6LQ2NKX8 1250 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 LRIT3Q3SXY7 679 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 KMT5BQ4FZB7 885 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 SMUG1Q53HV7 270 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 XKR3Q5GH77 459 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 TREML2Q5T2D2 321 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 ATPAF1Q5TC12 328 aaPredicted RBP3.7□□□□□ -1.82
SMG6-208ENST00000570874 NT5DC1Q5TFE4 455 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 YOD1Q5VVQ6 348 aaPredicted RBP3.7□□□□□ -1.82
SMG6-208ENST00000570874 RRAGBQ5VZM2 374 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 OR7E24Q6IFN5 339 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 CENPPQ6IPU0 288 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 ACAD10Q6JQN1 1059 aa3.7□□□□□ -1.82
SMG6-208ENST00000570874 NEK5Q6P3R8 708 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms