RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	DARS2	Q6PI48	645 aa	Known RBP	4	□□□□□ -1.77
UBR1-209	ENST00000569243	RBM44	Q6ZP01	1051 aa	Known RBP	4	□□□□□ -1.77
UBR1-209	ENST00000569243	UNC13D	Q70J99	1090 aa		4	□□□□□ -1.77
UBR1-209	ENST00000569243	MAGEB6	Q8N7X4	407 aa		4	□□□□□ -1.77
UBR1-209	ENST00000569243	C11orf44	Q8N8P7	122 aa		4	□□□□□ -1.77
UBR1-209	ENST00000569243	SLC44A5	Q8NCS7	719 aa		4	□□□□□ -1.77
UBR1-209	ENST00000569243	SUN3	Q8TAQ9	357 aa		4	□□□□□ -1.77
UBR1-209	ENST00000569243	NR4A3	Q92570	626 aa		4	□□□□□ -1.77
UBR1-209	ENST00000569243	NLRP4	Q96MN2	994 aa		4	□□□□□ -1.77
UBR1-209	ENST00000569243	DECR2	Q9NUI1	292 aa		4	□□□□□ -1.77
UBR1-209	ENST00000569243	SELENON	Q9NZV5	590 aa		4	□□□□□ -1.77
UBR1-209	ENST00000569243	SHROOM4	Q9ULL8	1493 aa		3.99	□□□□□ -1.77
UBR1-209	ENST00000569243	PRSS47	A8MTI9	375 aa		3.99	□□□□□ -1.77
UBR1-209	ENST00000569243	TTC34	A8MYJ7	566 aa		3.99	□□□□□ -1.77
UBR1-209	ENST00000569243	ZNF814	B7Z6K7	855 aa		3.99	□□□□□ -1.77
UBR1-209	ENST00000569243		F8W810	466 aa		3.99	□□□□□ -1.77
UBR1-209	ENST00000569243	RRH	O14718	337 aa		3.99	□□□□□ -1.77
UBR1-209	ENST00000569243	CTIF	O43310	598 aa	Known RBP	3.99	□□□□□ -1.77
UBR1-209	ENST00000569243	MGEA5	O60502	916 aa		3.99	□□□□□ -1.77
UBR1-209	ENST00000569243	ZBED1	O96006	694 aa		3.99	□□□□□ -1.77
UBR1-209	ENST00000569243	S100B	P04271	92 aa	Predicted RBP	3.99	□□□□□ -1.77
UBR1-209	ENST00000569243	TFEB	P19484	476 aa		3.99	□□□□□ -1.77
UBR1-209	ENST00000569243	HOXA7	P31268	230 aa	Predicted RBP	3.99	□□□□□ -1.77
UBR1-209	ENST00000569243	GALNS	P34059	522 aa		3.99	□□□□□ -1.77
UBR1-209	ENST00000569243	CDKN2A	P42771	156 aa	Known RBP	3.99	□□□□□ -1.77
UBR1-209	ENST00000569243	CARS	P49589	748 aa	Known RBP	3.99	□□□□□ -1.77
UBR1-209	ENST00000569243	ITGA8	P53708	1063 aa		3.99	□□□□□ -1.77
UBR1-209	ENST00000569243	FAM193A	P78312	1265 aa		3.99	□□□□□ -1.77
UBR1-209	ENST00000569243	KPNB1	Q14974	876 aa	Known RBP	3.99	□□□□□ -1.77
UBR1-209	ENST00000569243	AASDH	Q4L235	1098 aa	Predicted RBP	3.99	□□□□□ -1.77
UBR1-209	ENST00000569243	ZNF793	Q6ZN11	406 aa		3.99	□□□□□ -1.77
UBR1-209	ENST00000569243	KRT28	Q7Z3Y7	464 aa		3.99	□□□□□ -1.77
UBR1-209	ENST00000569243	SESTD1	Q86VW0	696 aa		3.99	□□□□□ -1.77
UBR1-209	ENST00000569243	UEVLD	Q8IX04	471 aa		3.99	□□□□□ -1.77
UBR1-209	ENST00000569243	TRMT61A	Q96FX7	289 aa	Known RBP	3.99	□□□□□ -1.77
UBR1-209	ENST00000569243	GATA5	Q9BWX5	397 aa	Predicted RBP	3.99	□□□□□ -1.77
UBR1-209	ENST00000569243	BTBD1	Q9H0C5	482 aa		3.99	□□□□□ -1.77
UBR1-209	ENST00000569243	SLCO5A1	Q9H2Y9	848 aa		3.99	□□□□□ -1.77
UBR1-209	ENST00000569243	ERVK-5	Q9HDB9	667 aa		3.99	□□□□□ -1.77
UBR1-209	ENST00000569243	PAPOLB	Q9NRJ5	636 aa	Known RBP	3.99	□□□□□ -1.77
UBR1-209	ENST00000569243	ITGB1BP2	Q9UKP3	347 aa		3.99	□□□□□ -1.77
UBR1-209	ENST00000569243	AGO2	Q9UKV8	859 aa	Known RBP	3.99	□□□□□ -1.77
UBR1-209	ENST00000569243	PCDHA12	Q9UN75	941 aa		3.99	□□□□□ -1.77
UBR1-209	ENST00000569243	HPSE	Q9Y251	543 aa		3.99	□□□□□ -1.77
UBR1-209	ENST00000569243	TRBV5-3	A0A0A0MS03	114 aa		3.98	□□□□□ -1.77
UBR1-209	ENST00000569243	WDR47	O94967	919 aa		3.98	□□□□□ -1.77
UBR1-209	ENST00000569243	EPN2	O95208	641 aa		3.98	□□□□□ -1.77
UBR1-209	ENST00000569243	SCGB1D2	O95969	90 aa		3.98	□□□□□ -1.77
UBR1-209	ENST00000569243	MT-ND5	P03915	603 aa		3.98	□□□□□ -1.77
UBR1-209	ENST00000569243	MYB	P10242	640 aa		3.98	□□□□□ -1.77
UBR1-209	ENST00000569243	MATN1	P21941	496 aa		3.98	□□□□□ -1.77
UBR1-209	ENST00000569243	HOXD12	P35452	270 aa		3.98	□□□□□ -1.77
UBR1-209	ENST00000569243	PPP2R5A	Q15172	486 aa		3.98	□□□□□ -1.77
UBR1-209	ENST00000569243	CNGA3	Q16281	694 aa		3.98	□□□□□ -1.77
UBR1-209	ENST00000569243	GRHL2	Q6ISB3	625 aa		3.98	□□□□□ -1.77
UBR1-209	ENST00000569243	ZNF549	Q6P9A3	640 aa		3.98	□□□□□ -1.77
UBR1-209	ENST00000569243	FSTL5	Q8N475	847 aa	Predicted RBP	3.98	□□□□□ -1.77
UBR1-209	ENST00000569243	OVCA2	Q8WZ82	227 aa		3.98	□□□□□ -1.77
UBR1-209	ENST00000569243	PIGK	Q92643	395 aa		3.98	□□□□□ -1.77
UBR1-209	ENST00000569243	SNX22	Q96L94	193 aa		3.98	□□□□□ -1.77
UBR1-209	ENST00000569243	CAMK1G	Q96NX5	476 aa		3.98	□□□□□ -1.77
UBR1-209	ENST00000569243	SENP7	Q9BQF6	1050 aa		3.98	□□□□□ -1.77
UBR1-209	ENST00000569243	TMEM204	Q9BSN7	226 aa		3.98	□□□□□ -1.77
UBR1-209	ENST00000569243	UNK	Q9C0B0	810 aa	Known RBP	3.98	□□□□□ -1.77
UBR1-209	ENST00000569243	ZNF212	Q9UDV6	495 aa		3.98	□□□□□ -1.77
UBR1-209	ENST00000569243	EID1	Q9Y6B2	187 aa		3.98	□□□□□ -1.77
UBR1-209	ENST00000569243	CA12	O43570	354 aa		3.97	□□□□□ -1.77
UBR1-209	ENST00000569243	MAP4K4	O95819	1239 aa	Predicted RBP	3.97	□□□□□ -1.77
UBR1-209	ENST00000569243	MMP8	P22894	467 aa		3.97	□□□□□ -1.77
UBR1-209	ENST00000569243	NTSR1	P30989	418 aa		3.97	□□□□□ -1.77
UBR1-209	ENST00000569243	KCNAB1	Q14722	419 aa		3.97	□□□□□ -1.77
UBR1-209	ENST00000569243	ARHGAP29	Q52LW3	1261 aa		3.97	□□□□□ -1.77
UBR1-209	ENST00000569243	GLE1	Q53GS7	698 aa	Known RBP	3.97	□□□□□ -1.77
UBR1-209	ENST00000569243	GFI1B	Q5VTD9	330 aa		3.97	□□□□□ -1.77
UBR1-209	ENST00000569243	TLDC1	Q6P9B6	456 aa		3.97	□□□□□ -1.77
UBR1-209	ENST00000569243	RNF44	Q7L0R7	432 aa		3.97	□□□□□ -1.77
UBR1-209	ENST00000569243	TFAP2D	Q7Z6R9	452 aa		3.97	□□□□□ -1.77
UBR1-209	ENST00000569243	B4GALNT2	Q8NHY0	566 aa		3.97	□□□□□ -1.77
UBR1-209	ENST00000569243	ABHD5	Q8WTS1	349 aa		3.97	□□□□□ -1.77
UBR1-209	ENST00000569243	SLC25A28	Q96A46	364 aa		3.97	□□□□□ -1.77
UBR1-209	ENST00000569243	WDR24	Q96S15	920 aa		3.97	□□□□□ -1.77
UBR1-209	ENST00000569243	MEIS3	Q99687	375 aa		3.97	□□□□□ -1.77
UBR1-209	ENST00000569243	ZBTB26	Q9HCK0	441 aa		3.97	□□□□□ -1.77
UBR1-209	ENST00000569243	MLXIPL	Q9NP71	852 aa		3.97	□□□□□ -1.77
UBR1-209	ENST00000569243	ABHD10	Q9NUJ1	306 aa		3.97	□□□□□ -1.77
UBR1-209	ENST00000569243	HEMK1	Q9Y5R4	338 aa	Predicted RBP	3.97	□□□□□ -1.77
UBR1-209	ENST00000569243	SLC22A23	A1A5C7	686 aa		3.96	□□□□□ -1.78
UBR1-209	ENST00000569243	C16orf96	A6NNT2	1141 aa		3.96	□□□□□ -1.78
UBR1-209	ENST00000569243		A6NNZ2	444 aa		3.96	□□□□□ -1.78
UBR1-209	ENST00000569243	AREL1	O15033	823 aa		3.96	□□□□□ -1.78
UBR1-209	ENST00000569243	CBFA2T3	O75081	653 aa		3.96	□□□□□ -1.78
UBR1-209	ENST00000569243	SYF2	O95926	243 aa	Known RBP	3.96	□□□□□ -1.78
UBR1-209	ENST00000569243	ANXA2	P07355	339 aa	Known RBP	3.96	□□□□□ -1.78
UBR1-209	ENST00000569243	TGFB3	P10600	412 aa		3.96	□□□□□ -1.78
UBR1-209	ENST00000569243	SLC5A2	P31639	672 aa		3.96	□□□□□ -1.78
UBR1-209	ENST00000569243	KCNJ4	P48050	445 aa		3.96	□□□□□ -1.78
UBR1-209	ENST00000569243	POLD2	P49005	469 aa		3.96	□□□□□ -1.78
UBR1-209	ENST00000569243	ZNF585B	Q52M93	769 aa		3.96	□□□□□ -1.78
UBR1-209	ENST00000569243	RFX8	Q6ZV50	586 aa		3.96	□□□□□ -1.78
UBR1-209	ENST00000569243	RFX6	Q8HWS3	928 aa		3.96	□□□□□ -1.78

Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms