RNA–Protein interactions for RNA: ENST00000539680.1

ECHDC2-222, Transcript of enoyl-CoA hydratase domain containing 2, human

Gene ECHDC2, Length 5,817 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC2-222	ENST00000539680	SERAC1	Q96JX3	654 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	ADPRHL2	Q9NX46	363 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	GPRC5D	Q9NZD1	345 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	BARX2	Q9UMQ3	279 aa	Predicted RBP	9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	PLA2G4C	Q9UP65	541 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	NCKAP1	Q9Y2A7	1128 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	KLHL41	O60662	606 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	CLTB	P09497	229 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	TGFB3	P10600	412 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	ACO1	P21399	889 aa	Known RBP	9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	TARS	P26639	723 aa	Known RBP	9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	CDK7	P50613	346 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	ITGA1	P56199	1179 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	GJB7	Q6PEY0	223 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	EID3	Q8N140	333 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	TMEM132C	Q8N3T6	1108 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	ACTRT2	Q8TDY3	377 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	QRFPR	Q96P65	431 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	YME1L1	Q96TA2	773 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	APOL4	Q9BPW4	351 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	SYNPO2	Q9UMS6	1093 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	HPS5	Q9UPZ3	1129 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	SHOC2	Q9UQ13	582 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	DNAJC16	Q9Y2G8	782 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	ANKRD65	E5RJM6	399 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	UBD	O15205	165 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	TRIM13	O60858	407 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	NFIC	P08651	508 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	ZNF7	P17097	686 aa	Predicted RBP	9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	PBLD	P30039	288 aa	Predicted RBP	9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	HAL	P42357	657 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	CD151	P48509	253 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	IRAK1	P51617	712 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	BCORL1	Q5H9F3	1711 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	LYPLAL1	Q5VWZ2	237 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	RETSAT	Q6NUM9	610 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	BSND	Q8WZ55	320 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	KCNB2	Q92953	911 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	PANX3	Q96QZ0	392 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	SERHL2	Q9H4I8	314 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	SERHL	Q9NQF3	203 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	AVEN	Q9NQS1	362 aa	Predicted RBP	9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	SF3B1	O75533	1304 aa	Known RBP eCLIP	9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	RBAK-RBAKDN	I3L0D1	243 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	MED24	O75448	989 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	STAU1	O95793	577 aa	Known RBP	9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	DPEP1	P16444	411 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	PTPN4	P29074	926 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	EFEMP1	Q12805	493 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	MPP3	Q13368	585 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	PKN1	Q16512	942 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	STK40	Q8N2I9	435 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	COLGALT1	Q8NBJ5	622 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	ATP8B4	Q8TF62	1192 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	SOCS4	Q8WXH5	440 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	RMND5B	Q96G75	393 aa	Predicted RBP	9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	VAT1	Q99536	393 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	FAM118B	Q9BPY3	351 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	CRYL1	Q9Y2S2	319 aa		9.23	□□□□□ -0.93
ECHDC2-222	ENST00000539680	NCF1B	A6NI72	391 aa	Predicted RBP	9.22	□□□□□ -0.93
ECHDC2-222	ENST00000539680	NCF1C	A8MVU1	366 aa	Predicted RBP	9.22	□□□□□ -0.93
ECHDC2-222	ENST00000539680	TBC1D12	O60347	775 aa		9.22	□□□□□ -0.93
ECHDC2-222	ENST00000539680	FAM20B	O75063	409 aa		9.22	□□□□□ -0.93
ECHDC2-222	ENST00000539680	XYLB	O75191	536 aa		9.22	□□□□□ -0.93
ECHDC2-222	ENST00000539680	GNRH1	P01148	92 aa		9.22	□□□□□ -0.93
ECHDC2-222	ENST00000539680	ALDH2	P05091	517 aa		9.22	□□□□□ -0.93
ECHDC2-222	ENST00000539680	NCF1	P14598	390 aa	Predicted RBP	9.22	□□□□□ -0.93
ECHDC2-222	ENST00000539680	TFE3	P19532	575 aa	Predicted RBP	9.22	□□□□□ -0.93
ECHDC2-222	ENST00000539680	CORO7	P57737	925 aa		9.22	□□□□□ -0.93
ECHDC2-222	ENST00000539680	FKBP1A	P62942	108 aa	Known RBP	9.22	□□□□□ -0.93
ECHDC2-222	ENST00000539680	RCN1	Q15293	331 aa		9.22	□□□□□ -0.93
ECHDC2-222	ENST00000539680	CASP12	Q6UXS9	341 aa		9.22	□□□□□ -0.93
ECHDC2-222	ENST00000539680	TXNRD3	Q86VQ6	643 aa		9.22	□□□□□ -0.93
ECHDC2-222	ENST00000539680	PPP1R16A	Q96I34	528 aa		9.22	□□□□□ -0.93
ECHDC2-222	ENST00000539680	KLF6	Q99612	283 aa	Predicted RBP	9.22	□□□□□ -0.93
ECHDC2-222	ENST00000539680	GINS4	Q9BRT9	223 aa		9.22	□□□□□ -0.93
ECHDC2-222	ENST00000539680	ADI1	Q9BV57	179 aa		9.22	□□□□□ -0.93
ECHDC2-222	ENST00000539680	KLK14	Q9P0G3	267 aa		9.22	□□□□□ -0.93
ECHDC2-222	ENST00000539680	C15orf38-AP3S2	A0A0A6YYH1	394 aa		9.22	□□□□□ -0.93
ECHDC2-222	ENST00000539680	CCDC189	A1A4V9	331 aa		9.22	□□□□□ -0.93
ECHDC2-222	ENST00000539680	DYTN	A2CJ06	578 aa		9.22	□□□□□ -0.93
ECHDC2-222	ENST00000539680		F8VZ95	297 aa		9.22	□□□□□ -0.93
ECHDC2-222	ENST00000539680	KATNA1	O75449	491 aa		9.22	□□□□□ -0.93
ECHDC2-222	ENST00000539680	SKAP2	O75563	359 aa	Predicted RBP	9.22	□□□□□ -0.93
ECHDC2-222	ENST00000539680	MTA2	O94776	668 aa		9.22	□□□□□ -0.93
ECHDC2-222	ENST00000539680	PTPN11	Q06124	597 aa	Predicted RBP	9.22	□□□□□ -0.93
ECHDC2-222	ENST00000539680	TRMT5	Q32P41	509 aa	Known RBP	9.22	□□□□□ -0.93
ECHDC2-222	ENST00000539680	ZCWPW2	Q504Y3	356 aa		9.22	□□□□□ -0.93
ECHDC2-222	ENST00000539680	ZFP1	Q6P2D0	407 aa		9.22	□□□□□ -0.93
ECHDC2-222	ENST00000539680	ARPIN	Q7Z6K5	226 aa		9.22	□□□□□ -0.93
ECHDC2-222	ENST00000539680	CLYBL	Q8N0X4	340 aa		9.22	□□□□□ -0.93
ECHDC2-222	ENST00000539680	MCOLN3	Q8TDD5	553 aa		9.22	□□□□□ -0.93
ECHDC2-222	ENST00000539680	CPB2	Q96IY4	423 aa		9.22	□□□□□ -0.93
ECHDC2-222	ENST00000539680	DPY30	Q9C005	99 aa		9.22	□□□□□ -0.93
ECHDC2-222	ENST00000539680	TMX2	Q9Y320	296 aa		9.22	□□□□□ -0.93
ECHDC2-222	ENST00000539680	PCDHA3	Q9Y5H8	950 aa		9.22	□□□□□ -0.93
ECHDC2-222	ENST00000539680	IQSEC2	Q5JU85	1478 aa		9.22	□□□□□ -0.93
ECHDC2-222	ENST00000539680	TEX28	O15482	410 aa		9.22	□□□□□ -0.93
ECHDC2-222	ENST00000539680	RGS14	O43566	566 aa		9.22	□□□□□ -0.93
ECHDC2-222	ENST00000539680	ATP6V1B2	P21281	511 aa		9.22	□□□□□ -0.93

Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms