RNA–Protein interactions for RNA: ENST00000537849.1

SPARC-207, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 218 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-207ENST00000537849 OLA1Q9NTK5 396 aaKnown RBP12.18□□□□□ -0.46
SPARC-207ENST00000537849 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.18□□□□□ -0.46
SPARC-207ENST00000537849 ARHGEF38Q9NXL2 777 aa12.18□□□□□ -0.46
SPARC-207ENST00000537849 TRPM5Q9NZQ8 1165 aa12.18□□□□□ -0.46
SPARC-207ENST00000537849 AP4E1Q9UPM8 1137 aa12.18□□□□□ -0.46
SPARC-207ENST00000537849 CCDC188H7C350 402 aa12.17□□□□□ -0.46
SPARC-207ENST00000537849 RFXAPO00287 272 aa12.17□□□□□ -0.46
SPARC-207ENST00000537849 PER2O15055 1255 aa12.17□□□□□ -0.46
SPARC-207ENST00000537849 TLR5O60602 858 aa12.17□□□□□ -0.46
SPARC-207ENST00000537849 ZMYND10O75800 440 aa12.17□□□□□ -0.46
SPARC-207ENST00000537849 TUBB4BP68371 445 aa12.17□□□□□ -0.46
SPARC-207ENST00000537849 SMAD3P84022 425 aaKnown RBP12.17□□□□□ -0.46
SPARC-207ENST00000537849 EFEMP1Q12805 493 aa12.17□□□□□ -0.46
SPARC-207ENST00000537849 SEMA3BQ13214 749 aa12.17□□□□□ -0.46
SPARC-207ENST00000537849 PPP2R5DQ14738 602 aa12.17□□□□□ -0.46
SPARC-207ENST00000537849 TRIP4Q15650 581 aaPredicted RBP12.17□□□□□ -0.46
SPARC-207ENST00000537849 TAF12Q16514 161 aa12.17□□□□□ -0.46
SPARC-207ENST00000537849 CYP1B1Q16678 543 aa12.17□□□□□ -0.46
SPARC-207ENST00000537849 BRMS1LQ5PSV4 323 aa12.17□□□□□ -0.46
SPARC-207ENST00000537849 C10orf120Q5SQS8 335 aa12.17□□□□□ -0.46
SPARC-207ENST00000537849 HECTD3Q5T447 861 aa12.17□□□□□ -0.46
SPARC-207ENST00000537849 KLHDC10Q6PID8 442 aa12.17□□□□□ -0.46
SPARC-207ENST00000537849 SND1Q7KZF4 910 aaKnown RBP eCLIP12.17□□□□□ -0.462e-9■■■■■ 68.2
SPARC-207ENST00000537849 TMC8Q8IU68 726 aa12.17□□□□□ -0.46
SPARC-207ENST00000537849 MAP7D3Q8IWC1 876 aa12.17□□□□□ -0.46
SPARC-207ENST00000537849 PCDH19Q8TAB3 1148 aa12.17□□□□□ -0.46
SPARC-207ENST00000537849 MAIP1Q8WWC4 291 aa12.17□□□□□ -0.46
SPARC-207ENST00000537849 FCRL2Q96LA5 508 aaPredicted RBP12.17□□□□□ -0.46
SPARC-207ENST00000537849 ZNF512Q96ME7 567 aaPredicted RBP12.17□□□□□ -0.46
SPARC-207ENST00000537849 RNF38Q9H0F5 515 aa12.17□□□□□ -0.46
SPARC-207ENST00000537849 TKTL2Q9H0I9 626 aa12.17□□□□□ -0.46
SPARC-207ENST00000537849 OSBPL2Q9H1P3 480 aa12.17□□□□□ -0.46
SPARC-207ENST00000537849 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.17□□□□□ -0.46
SPARC-207ENST00000537849 CWC15Q9P013 229 aaKnown RBP12.17□□□□□ -0.46
SPARC-207ENST00000537849 UXTQ9UBK9 157 aaPredicted RBP12.17□□□□□ -0.46
SPARC-207ENST00000537849 TLR6Q9Y2C9 796 aa12.17□□□□□ -0.46
SPARC-207ENST00000537849 RANBP2P49792 3224 aaKnown RBP12.17□□□□□ -0.46
SPARC-207ENST00000537849 FAM72CH0Y354 149 aa12.16□□□□□ -0.46
SPARC-207ENST00000537849 NRG2O14511 850 aaPredicted RBP12.16□□□□□ -0.46
SPARC-207ENST00000537849 CCL16O15467 120 aa12.16□□□□□ -0.46
SPARC-207ENST00000537849 MSI1O43347 362 aaKnown RBP12.16□□□□□ -0.46
SPARC-207ENST00000537849 RFPL2O75678 378 aa12.16□□□□□ -0.46
SPARC-207ENST00000537849 TJP3O95049 919 aa12.16□□□□□ -0.46
SPARC-207ENST00000537849 PAPLNO95428 1278 aa12.16□□□□□ -0.46
SPARC-207ENST00000537849 IGLV3-27P01718 113 aa12.16□□□□□ -0.46
SPARC-207ENST00000537849 LRG1P02750 347 aa12.16□□□□□ -0.46
SPARC-207ENST00000537849 ATP5C1P36542 298 aaKnown RBP12.16□□□□□ -0.46
SPARC-207ENST00000537849 HCAR3P49019 387 aa12.16□□□□□ -0.46
SPARC-207ENST00000537849 TBX4P57082 545 aa12.16□□□□□ -0.46
SPARC-207ENST00000537849 NNTQ13423 1086 aa12.16□□□□□ -0.46
SPARC-207ENST00000537849 KCNC3Q14003 757 aa12.16□□□□□ -0.46
SPARC-207ENST00000537849 KRT81Q14533 505 aa12.16□□□□□ -0.46
SPARC-207ENST00000537849 ERCC6LQ2NKX8 1250 aa12.16□□□□□ -0.46
SPARC-207ENST00000537849 PABPC1LQ4VXU2 614 aaKnown RBP12.16□□□□□ -0.46
SPARC-207ENST00000537849 ODF2Q5BJF6 829 aa12.16□□□□□ -0.46
SPARC-207ENST00000537849 ANKRD20A8PQ5CZ79 823 aa12.16□□□□□ -0.46
SPARC-207ENST00000537849 PPM1LQ5SGD2 360 aa12.16□□□□□ -0.46
SPARC-207ENST00000537849 FAM72AQ5TYM5 149 aa12.16□□□□□ -0.46
SPARC-207ENST00000537849 KAZNQ674X7 775 aa12.16□□□□□ -0.46
SPARC-207ENST00000537849 FAM72DQ6L9T8 149 aa12.16□□□□□ -0.46
SPARC-207ENST00000537849 BBS12Q6ZW61 710 aa12.16□□□□□ -0.46
SPARC-207ENST00000537849 GAREM2Q75VX8 874 aa12.16□□□□□ -0.46
SPARC-207ENST00000537849 FAM72BQ86X60 149 aa12.16□□□□□ -0.46
SPARC-207ENST00000537849 PQLC3Q8N755 202 aa12.16□□□□□ -0.46
SPARC-207ENST00000537849 GDPD5Q8WTR4 605 aa12.16□□□□□ -0.46
SPARC-207ENST00000537849 TIFAQ96CG3 184 aa12.16□□□□□ -0.46
SPARC-207ENST00000537849 SERPINB11Q96P15 392 aa12.16□□□□□ -0.46
SPARC-207ENST00000537849 HAPLN3Q96S86 360 aa12.16□□□□□ -0.46
SPARC-207ENST00000537849 LRRC19Q9H756 370 aa12.16□□□□□ -0.46
SPARC-207ENST00000537849 TLE6Q9H808 572 aa12.16□□□□□ -0.46
SPARC-207ENST00000537849 MAN1C1Q9NR34 630 aa12.16□□□□□ -0.46
SPARC-207ENST00000537849 MARCH2Q9P0N8 246 aa12.16□□□□□ -0.46
SPARC-207ENST00000537849 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.16□□□□□ -0.46
SPARC-207ENST00000537849 DNMT3LQ9UJW3 386 aa12.16□□□□□ -0.46
SPARC-207ENST00000537849 R3HDM2Q9Y2K5 976 aaKnown RBP12.16□□□□□ -0.46
SPARC-207ENST00000537849 SNX10Q9Y5X0 201 aa12.16□□□□□ -0.46
SPARC-207ENST00000537849 V9GYY5 206 aaPredicted RBP12.16□□□□□ -0.46
SPARC-207ENST00000537849 DOCK4Q8N1I0 1966 aa12.16□□□□□ -0.46
SPARC-207ENST00000537849 SLC12A8A0AV02 714 aa12.15□□□□□ -0.46
SPARC-207ENST00000537849 COCHO43405 550 aa12.15□□□□□ -0.46
SPARC-207ENST00000537849 CST8O60676 142 aa12.15□□□□□ -0.46
SPARC-207ENST00000537849 OAS1P00973 400 aaKnown RBP12.15□□□□□ -0.46
SPARC-207ENST00000537849 HNRNPA1P09651 372 aaKnown RBP eCLIP12.15□□□□□ -0.46
SPARC-207ENST00000537849 AMPD1P23109 780 aa12.15□□□□□ -0.46
SPARC-207ENST00000537849 HOXA9P31269 272 aa12.15□□□□□ -0.46
SPARC-207ENST00000537849 CCR1P32246 355 aa12.15□□□□□ -0.46
SPARC-207ENST00000537849 COILP38432 576 aaPredicted RBP12.15□□□□□ -0.46
SPARC-207ENST00000537849 PTGIRP43119 386 aa12.15□□□□□ -0.46
SPARC-207ENST00000537849 TUBP50607 506 aa12.15□□□□□ -0.46
SPARC-207ENST00000537849 EPHA5P54756 1037 aa12.15□□□□□ -0.46
SPARC-207ENST00000537849 MLLT6P55198 1093 aaPredicted RBP12.15□□□□□ -0.46
SPARC-207ENST00000537849 RING1Q06587 406 aa12.15□□□□□ -0.46
SPARC-207ENST00000537849 CCNG2Q16589 344 aa12.15□□□□□ -0.46
SPARC-207ENST00000537849 DUSP6Q16828 381 aa12.15□□□□□ -0.46
SPARC-207ENST00000537849 ARL13BQ3SXY8 428 aa12.15□□□□□ -0.46
SPARC-207ENST00000537849 PPP6R3Q5H9R7 873 aaPredicted RBP12.15□□□□□ -0.46
SPARC-207ENST00000537849 EFHC2Q5JST6 749 aa12.15□□□□□ -0.46
SPARC-207ENST00000537849 RBM23Q86U06 439 aaKnown RBP12.15□□□□□ -0.46
SPARC-207ENST00000537849 RFX6Q8HWS3 928 aa12.15□□□□□ -0.46
SPARC-207ENST00000537849 KLHL7Q8IXQ5 586 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms