RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 AFF4Q9UHB7 1163 aaKnown RBP15.53■□□□□ 0.08
USP47-207ENST00000527733 SLC27A5Q9Y2P5 690 aa15.53■□□□□ 0.08
USP47-207ENST00000527733 NAV1Q8NEY1 1877 aa15.53■□□□□ 0.08
USP47-207ENST00000527733 ABCA3Q99758 1704 aa15.53■□□□□ 0.08
USP47-207ENST00000527733 ZSCAN5CA6NGD5 496 aaPredicted RBP15.53■□□□□ 0.08
USP47-207ENST00000527733 TRIM49D1C9J1S8 452 aa15.53■□□□□ 0.08
USP47-207ENST00000527733 SERPINF2P08697 491 aa15.53■□□□□ 0.08
USP47-207ENST00000527733 RALBP11234 206 aa15.53■□□□□ 0.08
USP47-207ENST00000527733 OR1D2P34982 312 aa15.53■□□□□ 0.08
USP47-207ENST00000527733 MRNIPQ6NTE8 343 aa15.53■□□□□ 0.08
USP47-207ENST00000527733 CPXM1Q96SM3 734 aa15.53■□□□□ 0.08
USP47-207ENST00000527733 VAT1Q99536 393 aa15.53■□□□□ 0.08
USP47-207ENST00000527733 TSR3Q9UJK0 312 aaKnown RBP15.53■□□□□ 0.08
USP47-207ENST00000527733 PCDHGC3Q9UN70 934 aa15.53■□□□□ 0.08
USP47-207ENST00000527733 TMEM120BA0PK00 339 aa15.52■□□□□ 0.08
USP47-207ENST00000527733 LAG3P18627 525 aa15.52■□□□□ 0.08
USP47-207ENST00000527733 ART3Q13508 389 aa15.52■□□□□ 0.08
USP47-207ENST00000527733 DBN1Q16643 649 aa15.52■□□□□ 0.08
USP47-207ENST00000527733 ZRANB3Q5FWF4 1079 aa15.52■□□□□ 0.08
USP47-207ENST00000527733 PTRHD1Q6GMV3 140 aaKnown RBP15.52■□□□□ 0.08
USP47-207ENST00000527733 PLEKHA7Q6IQ23 1121 aa15.52■□□□□ 0.08
USP47-207ENST00000527733 APTXQ7Z2E3 356 aaKnown RBP15.52■□□□□ 0.08
USP47-207ENST00000527733 CRYGNQ8WXF5 182 aa15.52■□□□□ 0.08
USP47-207ENST00000527733 SCUBE2Q9NQ36 999 aa15.52■□□□□ 0.08
USP47-207ENST00000527733 SPG21Q9NZD8 308 aa15.52■□□□□ 0.08
USP47-207ENST00000527733 GRID1Q9ULK0 1009 aa15.52■□□□□ 0.08
USP47-207ENST00000527733 ARVCFO00192 962 aa15.52■□□□□ 0.08
USP47-207ENST00000527733 ENDOD1O94919 500 aa15.52■□□□□ 0.08
USP47-207ENST00000527733 ERBB2P04626 1255 aa15.52■□□□□ 0.08
USP47-207ENST00000527733 MARCKSL1P49006 195 aa15.52■□□□□ 0.08
USP47-207ENST00000527733 GTF2H3Q13889 308 aa15.52■□□□□ 0.08
USP47-207ENST00000527733 CDCA2Q69YH5 1023 aaPredicted RBP15.52■□□□□ 0.08
USP47-207ENST00000527733 VSTM1Q6UX27 236 aa15.52■□□□□ 0.08
USP47-207ENST00000527733 HDAC7Q8WUI4 952 aa15.52■□□□□ 0.08
USP47-207ENST00000527733 FICDQ9BVA6 458 aa15.52■□□□□ 0.08
USP47-207ENST00000527733 TASP1Q9H6P5 420 aa15.52■□□□□ 0.08
USP47-207ENST00000527733 ACTR5Q9H9F9 607 aaPredicted RBP15.52■□□□□ 0.08
USP47-207ENST00000527733 TBC1D13Q9NVG8 400 aa15.52■□□□□ 0.08
USP47-207ENST00000527733 SCN7AQ01118 1682 aa15.52■□□□□ 0.07
USP47-207ENST00000527733 RNF103O00237 685 aa15.52■□□□□ 0.07
USP47-207ENST00000527733 PDE2AO00408 941 aaPredicted RBP15.52■□□□□ 0.07
USP47-207ENST00000527733 FGF10O15520 208 aaPredicted RBP15.52■□□□□ 0.07
USP47-207ENST00000527733 TSPAN3O60637 253 aa15.52■□□□□ 0.07
USP47-207ENST00000527733 RPL21P46778 160 aaKnown RBP15.52■□□□□ 0.07
USP47-207ENST00000527733 NUMBP49757 651 aa15.52■□□□□ 0.07
USP47-207ENST00000527733 SCNN1BP51168 640 aa15.52■□□□□ 0.07
USP47-207ENST00000527733 GJA9P57773 515 aa15.52■□□□□ 0.07
USP47-207ENST00000527733 DDR2Q16832 855 aa15.52■□□□□ 0.07
USP47-207ENST00000527733 ANKRD20A8PQ5CZ79 823 aa15.52■□□□□ 0.07
USP47-207ENST00000527733 MON1AQ86VX9 555 aa15.52■□□□□ 0.07
USP47-207ENST00000527733 CAVIN3Q969G5 261 aa15.52■□□□□ 0.07
USP47-207ENST00000527733 RNF157Q96PX1 679 aa15.52■□□□□ 0.07
USP47-207ENST00000527733 PCYT2Q99447 389 aa15.52■□□□□ 0.07
USP47-207ENST00000527733 CEP41Q9BYV8 373 aa15.52■□□□□ 0.07
USP47-207ENST00000527733 CIPCQ9C0C6 399 aa15.52■□□□□ 0.07
USP47-207ENST00000527733 LATS2Q9NRM7 1088 aa15.52■□□□□ 0.07
USP47-207ENST00000527733 UBP1Q9NZI7 540 aa15.52■□□□□ 0.07
USP47-207ENST00000527733 SLC39A10Q9ULF5 831 aa15.52■□□□□ 0.07
USP47-207ENST00000527733 DIAPH2O60879 1101 aa15.51■□□□□ 0.07
USP47-207ENST00000527733 DAB1O75553 588 aa15.51■□□□□ 0.07
USP47-207ENST00000527733 LCA5LO95447 670 aa15.51■□□□□ 0.07
USP47-207ENST00000527733 TARBP2Q15633 366 aaKnown RBP15.51■□□□□ 0.07
USP47-207ENST00000527733 AADACL2Q6P093 401 aa15.51■□□□□ 0.07
USP47-207ENST00000527733 PGBD3Q8N328 593 aa15.51■□□□□ 0.07
USP47-207ENST00000527733 MYCBPAPQ8TBZ2 947 aa15.51■□□□□ 0.07
USP47-207ENST00000527733 LRRC15Q8TF66 581 aa15.51■□□□□ 0.07
USP47-207ENST00000527733 PBXIP1Q96AQ6 731 aa15.51■□□□□ 0.07
USP47-207ENST00000527733 TSSK1BQ9BXA7 367 aa15.51■□□□□ 0.07
USP47-207ENST00000527733 DNMT3LQ9UJW3 386 aa15.51■□□□□ 0.07
USP47-207ENST00000527733 RAB21Q9UL25 225 aa15.51■□□□□ 0.07
USP47-207ENST00000527733 STXBP5LQ9Y2K9 1186 aa15.51■□□□□ 0.07
USP47-207ENST00000527733 SLC4A7Q9Y6M7 1214 aa15.51■□□□□ 0.07
USP47-207ENST00000527733 SLX4Q8IY92 1834 aa15.51■□□□□ 0.07
USP47-207ENST00000527733 RBL1P28749 1068 aa15.51■□□□□ 0.07
USP47-207ENST00000527733 CCND3P30281 292 aaPredicted RBP15.51■□□□□ 0.07
USP47-207ENST00000527733 GDF6Q6KF10 455 aaPredicted RBP15.51■□□□□ 0.07
USP47-207ENST00000527733 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.51■□□□□ 0.07
USP47-207ENST00000527733 SLC4A11Q8NBS3 891 aa15.51■□□□□ 0.07
USP47-207ENST00000527733 JOSD2Q8TAC2 188 aa15.51■□□□□ 0.07
USP47-207ENST00000527733 VCX3BQ9H321 246 aa15.51■□□□□ 0.07
USP47-207ENST00000527733 ADAM28Q9UKQ2 775 aa15.51■□□□□ 0.07
USP47-207ENST00000527733 TRIM33Q9UPN9 1127 aa15.51■□□□□ 0.07
USP47-207ENST00000527733 DRG1Q9Y295 367 aaKnown RBP15.51■□□□□ 0.07
USP47-207ENST00000527733 TCP11X1B4DZS4 312 aa15.51■□□□□ 0.07
USP47-207ENST00000527733 HIST1H2AGP0C0S8 130 aaPredicted RBP15.51■□□□□ 0.07
USP47-207ENST00000527733 HIST1H2ADP20671 130 aa15.51■□□□□ 0.07
USP47-207ENST00000527733 CASP2P42575 452 aa15.51■□□□□ 0.07
USP47-207ENST00000527733 RGS4P49798 205 aa15.51■□□□□ 0.07
USP47-207ENST00000527733 KIF19Q2TAC6 998 aa15.51■□□□□ 0.07
USP47-207ENST00000527733 BBS12Q6ZW61 710 aa15.51■□□□□ 0.07
USP47-207ENST00000527733 NPAS4Q8IUM7 802 aa15.51■□□□□ 0.07
USP47-207ENST00000527733 PDCD7Q8N8D1 485 aaKnown RBP15.51■□□□□ 0.07
USP47-207ENST00000527733 CDC26Q8NHZ8 85 aa15.51■□□□□ 0.07
USP47-207ENST00000527733 RSRC1Q96IZ7 334 aaKnown RBP15.51■□□□□ 0.07
USP47-207ENST00000527733 HIST1H2AHQ96KK5 128 aa15.51■□□□□ 0.07
USP47-207ENST00000527733 LRRC37BQ96QE4 947 aa15.51■□□□□ 0.07
USP47-207ENST00000527733 HIST1H2AJQ99878 128 aa15.51■□□□□ 0.07
USP47-207ENST00000527733 H2AFJQ9BTM1 129 aa15.51■□□□□ 0.07
USP47-207ENST00000527733 SIX2Q9NPC8 291 aa15.51■□□□□ 0.07
USP47-207ENST00000527733 CREBZFQ9NS37 354 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms