RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 LMAN2Q12907 356 aa4.44□□□□□ -1.7
SKP1-212ENST00000523966 DNASE1L3Q13609 305 aa4.44□□□□□ -1.7
SKP1-212ENST00000523966 TRIM60Q495X7 471 aa4.44□□□□□ -1.7
SKP1-212ENST00000523966 ALFQ53S48 1182 aa4.44□□□□□ -1.7
SKP1-212ENST00000523966 FAM90A2PQ658T7 463 aa4.44□□□□□ -1.7
SKP1-212ENST00000523966 LIN54Q6MZP7 749 aa4.44□□□□□ -1.7
SKP1-212ENST00000523966 WDR93Q6P2C0 686 aa4.44□□□□□ -1.7
SKP1-212ENST00000523966 TMEM65Q6PI78 240 aa4.44□□□□□ -1.7
SKP1-212ENST00000523966 ZNF627Q7L945 461 aa4.44□□□□□ -1.7
SKP1-212ENST00000523966 MRGPRGQ86SM5 289 aa4.44□□□□□ -1.7
SKP1-212ENST00000523966 TMEM57Q8N5G2 664 aa4.44□□□□□ -1.7
SKP1-212ENST00000523966 TERB1Q8NA31 727 aa4.44□□□□□ -1.7
SKP1-212ENST00000523966 OR1N1Q8NGS0 311 aa4.44□□□□□ -1.7
SKP1-212ENST00000523966 THAP4Q8WY91 577 aa4.44□□□□□ -1.7
SKP1-212ENST00000523966 PAAF1Q9BRP4 392 aa4.44□□□□□ -1.7
SKP1-212ENST00000523966 PYM1Q9BRP8 204 aaKnown RBP4.44□□□□□ -1.7
SKP1-212ENST00000523966 DDX23Q9BUQ8 820 aaKnown RBP4.44□□□□□ -1.7
SKP1-212ENST00000523966 ADGRE3Q9BY15 652 aa4.44□□□□□ -1.7
SKP1-212ENST00000523966 ASAP1Q9ULH1 1129 aa4.44□□□□□ -1.7
SKP1-212ENST00000523966 DAPP1Q9UN19 280 aa4.44□□□□□ -1.7
SKP1-212ENST00000523966 GPR52Q9Y2T5 361 aa4.44□□□□□ -1.7
SKP1-212ENST00000523966 PCDHB7Q9Y5E2 793 aa4.44□□□□□ -1.7
SKP1-212ENST00000523966 A0A087X1B8 175 aa4.43□□□□□ -1.7
SKP1-212ENST00000523966 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.43□□□□□ -1.7
SKP1-212ENST00000523966 EIF3FO00303 357 aaPredicted RBP4.43□□□□□ -1.7
SKP1-212ENST00000523966 SEPT4O43236 478 aa4.43□□□□□ -1.7
SKP1-212ENST00000523966 JTBO76095 146 aa4.43□□□□□ -1.7
SKP1-212ENST00000523966 C1RP00736 705 aa4.43□□□□□ -1.7
SKP1-212ENST00000523966 RXRAP19793 462 aa4.43□□□□□ -1.7
SKP1-212ENST00000523966 GPD1P21695 349 aa4.43□□□□□ -1.7
SKP1-212ENST00000523966 GRK5P34947 590 aa4.43□□□□□ -1.7
SKP1-212ENST00000523966 MCM2P49736 904 aa4.43□□□□□ -1.7
SKP1-212ENST00000523966 CDK7P50613 346 aa4.43□□□□□ -1.7
SKP1-212ENST00000523966 CACNA2D1P54289 1103 aa4.43□□□□□ -1.7
SKP1-212ENST00000523966 INHBCP55103 352 aa4.43□□□□□ -1.7
SKP1-212ENST00000523966 ACTR2P61160 394 aa4.43□□□□□ -1.7
SKP1-212ENST00000523966 RBM6P78332 1123 aaKnown RBP4.43□□□□□ -1.7
SKP1-212ENST00000523966 SIM1P81133 766 aaPredicted RBP4.43□□□□□ -1.7
SKP1-212ENST00000523966 ZXDAP98168 799 aa4.43□□□□□ -1.7
SKP1-212ENST00000523966 PSG6Q00889 435 aa4.43□□□□□ -1.7
SKP1-212ENST00000523966 CUL4BQ13620 913 aa4.43□□□□□ -1.7
SKP1-212ENST00000523966 FHL2Q14192 279 aa4.43□□□□□ -1.7
SKP1-212ENST00000523966 CNGA3Q16281 694 aa4.43□□□□□ -1.7
SKP1-212ENST00000523966 FBXO47Q5MNV8 452 aa4.43□□□□□ -1.7
SKP1-212ENST00000523966 ACSM6Q6P461 480 aa4.43□□□□□ -1.7
SKP1-212ENST00000523966 VSTM1Q6UX27 236 aa4.43□□□□□ -1.7
SKP1-212ENST00000523966 TRIM72Q6ZMU5 477 aa4.43□□□□□ -1.7
SKP1-212ENST00000523966 SRFBP1Q8NEF9 429 aaKnown RBP4.43□□□□□ -1.7
SKP1-212ENST00000523966 OR52L2PQ8NGH6 319 aa4.43□□□□□ -1.7
SKP1-212ENST00000523966 SPPL3Q8TCT6 385 aa4.43□□□□□ -1.7
SKP1-212ENST00000523966 FYTTD1Q96QD9 318 aaKnown RBP4.43□□□□□ -1.7
SKP1-212ENST00000523966 CHODLQ9H9P2 273 aa4.43□□□□□ -1.7
SKP1-212ENST00000523966 SAP30LQ9HAJ7 183 aa4.43□□□□□ -1.7
SKP1-212ENST00000523966 NOD2Q9HC29 1040 aa4.43□□□□□ -1.7
SKP1-212ENST00000523966 RRN3Q9NYV6 651 aa4.43□□□□□ -1.7
SKP1-212ENST00000523966 SH3BP4Q9P0V3 963 aa4.43□□□□□ -1.7
SKP1-212ENST00000523966 RRP7AQ9Y3A4 280 aaKnown RBP4.43□□□□□ -1.7
SKP1-212ENST00000523966 ENTPD2Q9Y5L3 495 aa4.43□□□□□ -1.7
SKP1-212ENST00000523966 CCDC187A0A096LP49 1063 aa4.42□□□□□ -1.7
SKP1-212ENST00000523966 FAM90A18PA6NE21 464 aa4.42□□□□□ -1.7
SKP1-212ENST00000523966 FAM90A16PA6NEW6 464 aa4.42□□□□□ -1.7
SKP1-212ENST00000523966 FAM90A9PA6NNJ1 464 aa4.42□□□□□ -1.7
SKP1-212ENST00000523966 FAM90A5PA8MXJ8 464 aa4.42□□□□□ -1.7
SKP1-212ENST00000523966 UBE2Q2LH0YL09 131 aa4.42□□□□□ -1.7
SKP1-212ENST00000523966 ZNF213O14771 459 aa4.42□□□□□ -1.7
SKP1-212ENST00000523966 DHHO43323 396 aa4.42□□□□□ -1.7
SKP1-212ENST00000523966 FAM155BO75949 473 aa4.42□□□□□ -1.7
SKP1-212ENST00000523966 MT-CO3P00414 261 aa4.42□□□□□ -1.7
SKP1-212ENST00000523966 FSHBP01225 129 aa4.42□□□□□ -1.7
SKP1-212ENST00000523966 ELFN1P0C7U0 828 aa4.42□□□□□ -1.7
SKP1-212ENST00000523966 FAM90A15PP0C7V4 464 aa4.42□□□□□ -1.7
SKP1-212ENST00000523966 FAM90A14PP0C7W9 464 aa4.42□□□□□ -1.7
SKP1-212ENST00000523966 FPR3P25089 353 aa4.42□□□□□ -1.7
SKP1-212ENST00000523966 DUSP1P28562 367 aa4.42□□□□□ -1.7
SKP1-212ENST00000523966 PCSK6P29122 969 aa4.42□□□□□ -1.7
SKP1-212ENST00000523966 GALNSP34059 522 aa4.42□□□□□ -1.7
SKP1-212ENST00000523966 PNLIPRP1P54315 467 aa4.42□□□□□ -1.7
SKP1-212ENST00000523966 PRKAA2P54646 552 aa4.42□□□□□ -1.7
SKP1-212ENST00000523966 GPC5P78333 572 aa4.42□□□□□ -1.7
SKP1-212ENST00000523966 CFHR3Q02985 330 aa4.42□□□□□ -1.7
SKP1-212ENST00000523966 FAM187BQ17R55 369 aa4.42□□□□□ -1.7
SKP1-212ENST00000523966 AAK1Q2M2I8 961 aa4.42□□□□□ -1.7
SKP1-212ENST00000523966 CC2D1BQ5T0F9 858 aaKnown RBP4.42□□□□□ -1.7
SKP1-212ENST00000523966 SUMO4Q6EEV6 95 aa4.42□□□□□ -1.7
SKP1-212ENST00000523966 CCDC70Q6NSX1 233 aa4.42□□□□□ -1.7
SKP1-212ENST00000523966 CYP26C1Q6V0L0 522 aa4.42□□□□□ -1.7
SKP1-212ENST00000523966 AMER2Q8N7J2 671 aa4.42□□□□□ -1.7
SKP1-212ENST00000523966 FSIP1Q8NA03 581 aa4.42□□□□□ -1.7
SKP1-212ENST00000523966 MAFAQ8NHW3 353 aaPredicted RBP4.42□□□□□ -1.7
SKP1-212ENST00000523966 CSGALNACT1Q8TDX6 532 aa4.42□□□□□ -1.7
SKP1-212ENST00000523966 ADAMTS18Q8TE60 1221 aa4.42□□□□□ -1.7
SKP1-212ENST00000523966 UBXN10Q96LJ8 280 aa4.42□□□□□ -1.7
SKP1-212ENST00000523966 UROC1Q96N76 676 aa4.42□□□□□ -1.7
SKP1-212ENST00000523966 SNX18Q96RF0 628 aa4.42□□□□□ -1.7
SKP1-212ENST00000523966 MMS19Q96T76 1030 aa4.42□□□□□ -1.7
SKP1-212ENST00000523966 KRTAP4-9Q9BYQ8 210 aa4.42□□□□□ -1.7
SKP1-212ENST00000523966 KRTAP4-2Q9BYR5 136 aa4.42□□□□□ -1.7
SKP1-212ENST00000523966 TRIM2Q9C040 744 aa4.42□□□□□ -1.7
SKP1-212ENST00000523966 IL17RBQ9NRM6 502 aa4.42□□□□□ -1.7
SKP1-212ENST00000523966 VPS45Q9NRW7 570 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms