RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 FBXL16Q8N461 479 aa5.77□□□□□ -1.49
CTNNA1-239ENST00000523685 PJA1Q8NG27 643 aa5.77□□□□□ -1.49
CTNNA1-239ENST00000523685 ITFG1Q8TB96 612 aa5.77□□□□□ -1.49
CTNNA1-239ENST00000523685 PIGOQ8TEQ8 1089 aa5.77□□□□□ -1.49
CTNNA1-239ENST00000523685 HDAC7Q8WUI4 952 aa5.77□□□□□ -1.49
CTNNA1-239ENST00000523685 ING5Q8WYH8 240 aa5.77□□□□□ -1.49
CTNNA1-239ENST00000523685 RUBCNQ92622 972 aa5.77□□□□□ -1.49
CTNNA1-239ENST00000523685 ALG3Q92685 438 aa5.77□□□□□ -1.49
CTNNA1-239ENST00000523685 FGF14Q92915 247 aa5.77□□□□□ -1.49
CTNNA1-239ENST00000523685 USP7Q93009 1102 aa5.77□□□□□ -1.49
CTNNA1-239ENST00000523685 CCDC51Q96ER9 411 aa5.77□□□□□ -1.49
CTNNA1-239ENST00000523685 DIRC2Q96SL1 478 aa5.77□□□□□ -1.49
CTNNA1-239ENST00000523685 KXD1Q9BQD3 176 aa5.77□□□□□ -1.49
CTNNA1-239ENST00000523685 EIF2AK1Q9BQI3 630 aaKnown RBP5.77□□□□□ -1.49
CTNNA1-239ENST00000523685 PAAF1Q9BRP4 392 aa5.77□□□□□ -1.49
CTNNA1-239ENST00000523685 BOCQ9BWV1 1114 aa5.77□□□□□ -1.49
CTNNA1-239ENST00000523685 POLR3FQ9H1D9 316 aaPredicted RBP5.77□□□□□ -1.49
CTNNA1-239ENST00000523685 SEMA4AQ9H3S1 761 aa5.77□□□□□ -1.49
CTNNA1-239ENST00000523685 XPNPEP1Q9NQW7 623 aa5.77□□□□□ -1.49
CTNNA1-239ENST00000523685 PDRG1Q9NUG6 133 aa5.77□□□□□ -1.49
CTNNA1-239ENST00000523685 ZDHHC7Q9NXF8 308 aa5.77□□□□□ -1.49
CTNNA1-239ENST00000523685 FNIP2Q9P278 1114 aa5.77□□□□□ -1.49
CTNNA1-239ENST00000523685 NCDNQ9UBB6 729 aa5.77□□□□□ -1.49
CTNNA1-239ENST00000523685 CDH7Q9ULB5 785 aa5.77□□□□□ -1.49
CTNNA1-239ENST00000523685 ATP8A1Q9Y2Q0 1164 aa5.77□□□□□ -1.49
CTNNA1-239ENST00000523685 GIT1Q9Y2X7 761 aa5.77□□□□□ -1.49
CTNNA1-239ENST00000523685 MTF2Q9Y483 593 aaPredicted RBP5.77□□□□□ -1.49
CTNNA1-239ENST00000523685 SF3B1O75533 1304 aaKnown RBP eCLIP5.76□□□□□ -1.49
CTNNA1-239ENST00000523685 KANSL1LA0AUZ9 987 aa5.76□□□□□ -1.49
CTNNA1-239ENST00000523685 ADAM12O43184 909 aa5.76□□□□□ -1.49
CTNNA1-239ENST00000523685 KRT37O76014 449 aa5.76□□□□□ -1.49
CTNNA1-239ENST00000523685 CDKL5O76039 1030 aa5.76□□□□□ -1.49
CTNNA1-239ENST00000523685 SLITRK3O94933 977 aa5.76□□□□□ -1.49
CTNNA1-239ENST00000523685 LTFP02788 710 aa5.76□□□□□ -1.49
CTNNA1-239ENST00000523685 GLRA2P23416 452 aa5.76□□□□□ -1.49
CTNNA1-239ENST00000523685 TXKP42681 527 aa5.76□□□□□ -1.49
CTNNA1-239ENST00000523685 EVCP57679 992 aa5.76□□□□□ -1.49
CTNNA1-239ENST00000523685 ANAPC15P60006 121 aa5.76□□□□□ -1.49
CTNNA1-239ENST00000523685 SRSF3P84103 164 aaKnown RBP5.76□□□□□ -1.49
CTNNA1-239ENST00000523685 IRF9Q00978 393 aa5.76□□□□□ -1.49
CTNNA1-239ENST00000523685 CREMQ03060 361 aa5.76□□□□□ -1.49
CTNNA1-239ENST00000523685 PUM1Q14671 1186 aaKnown RBP eCLIP5.76□□□□□ -1.49
CTNNA1-239ENST00000523685 MLF2Q15773 248 aaPredicted RBP5.76□□□□□ -1.49
CTNNA1-239ENST00000523685 SLC44A4Q53GD3 710 aa5.76□□□□□ -1.49
CTNNA1-239ENST00000523685 EARS2Q5JPH6 523 aaKnown RBP5.76□□□□□ -1.49
CTNNA1-239ENST00000523685 BTBD8Q5XKL5 378 aa5.76□□□□□ -1.49
CTNNA1-239ENST00000523685 PPP4R3AQ6IN85 833 aa5.76□□□□□ -1.49
CTNNA1-239ENST00000523685 LILRA6Q6PI73 481 aa5.76□□□□□ -1.49
CTNNA1-239ENST00000523685 TSSK4Q6SA08 328 aa5.76□□□□□ -1.49
CTNNA1-239ENST00000523685 TMC6Q7Z403 805 aa5.76□□□□□ -1.49
CTNNA1-239ENST00000523685 DDX42Q86XP3 938 aaKnown RBP eCLIP5.76□□□□□ -1.49
CTNNA1-239ENST00000523685 ATL2Q8NHH9 583 aa5.76□□□□□ -1.49
CTNNA1-239ENST00000523685 ATRIPQ8WXE1 791 aa5.76□□□□□ -1.49
CTNNA1-239ENST00000523685 FGF13Q92913 245 aa5.76□□□□□ -1.49
CTNNA1-239ENST00000523685 ZNF274Q96GC6 653 aaPredicted RBP5.76□□□□□ -1.49
CTNNA1-239ENST00000523685 TTC1Q99614 292 aa5.76□□□□□ -1.49
CTNNA1-239ENST00000523685 NAP1L4Q99733 375 aaKnown RBP5.76□□□□□ -1.49
CTNNA1-239ENST00000523685 CLSTN3Q9BQT9 956 aa5.76□□□□□ -1.49
CTNNA1-239ENST00000523685 TTPALQ9BTX7 342 aa5.76□□□□□ -1.49
CTNNA1-239ENST00000523685 FAM126AQ9BYI3 521 aaPredicted RBP5.76□□□□□ -1.49
CTNNA1-239ENST00000523685 RHOBTB2Q9BYZ6 727 aa5.76□□□□□ -1.49
CTNNA1-239ENST00000523685 EPB41L4BQ9H329 900 aa5.76□□□□□ -1.49
CTNNA1-239ENST00000523685 IFT22Q9H7X7 185 aa5.76□□□□□ -1.49
CTNNA1-239ENST00000523685 SLC2A4RGQ9NR83 387 aa5.76□□□□□ -1.49
CTNNA1-239ENST00000523685 HCFC1R1Q9NWW0 138 aa5.76□□□□□ -1.49
CTNNA1-239ENST00000523685 THG1LQ9NWX6 298 aaKnown RBP5.76□□□□□ -1.49
CTNNA1-239ENST00000523685 SIRT5Q9NXA8 310 aa5.76□□□□□ -1.49
CTNNA1-239ENST00000523685 DLGAP2Q9P1A6 1054 aa5.76□□□□□ -1.49
CTNNA1-239ENST00000523685 FBXW11Q9UKB1 542 aa5.76□□□□□ -1.49
CTNNA1-239ENST00000523685 GDAQ9Y2T3 454 aa5.76□□□□□ -1.49
CTNNA1-239ENST00000523685 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.76□□□□□ -1.49
CTNNA1-239ENST00000523685 DENND4AQ7Z401 1863 aa5.76□□□□□ -1.49
CTNNA1-239ENST00000523685 VPS13AQ96RL7 3174 aa5.76□□□□□ -1.49
CTNNA1-239ENST00000523685 C2orf16Q68DN1 1984 aa5.76□□□□□ -1.49
CTNNA1-239ENST00000523685 A0A1B0GUA9 196 aa5.75□□□□□ -1.49
CTNNA1-239ENST00000523685 LRRC10BA6NIK2 292 aa5.75□□□□□ -1.49
CTNNA1-239ENST00000523685 FAM90A27PA6NNH2 459 aa5.75□□□□□ -1.49
CTNNA1-239ENST00000523685 I3L4J1 428 aa5.75□□□□□ -1.49
CTNNA1-239ENST00000523685 SCDO00767 359 aa5.75□□□□□ -1.49
CTNNA1-239ENST00000523685 TBX3O15119 743 aa5.75□□□□□ -1.49
CTNNA1-239ENST00000523685 BRINP1O60477 761 aa5.75□□□□□ -1.49
CTNNA1-239ENST00000523685 HIP1RO75146 1068 aa5.75□□□□□ -1.49
CTNNA1-239ENST00000523685 RECQL4O94761 1208 aa5.75□□□□□ -1.49
CTNNA1-239ENST00000523685 FKBP9O95302 570 aa5.75□□□□□ -1.49
CTNNA1-239ENST00000523685 THP07101 528 aa5.75□□□□□ -1.49
CTNNA1-239ENST00000523685 HNRNPA1P09651 372 aaKnown RBP eCLIP5.75□□□□□ -1.49
CTNNA1-239ENST00000523685 BPIP17213 487 aa5.75□□□□□ -1.49
CTNNA1-239ENST00000523685 PTPN1P18031 435 aaKnown RBP5.75□□□□□ -1.49
CTNNA1-239ENST00000523685 OR1D2P34982 312 aa5.75□□□□□ -1.49
CTNNA1-239ENST00000523685 GJA4P35212 333 aa5.75□□□□□ -1.49
CTNNA1-239ENST00000523685 KRT2P35908 639 aa5.75□□□□□ -1.49
CTNNA1-239ENST00000523685 ARL2P36404 184 aa5.75□□□□□ -1.49
CTNNA1-239ENST00000523685 ARPP19P56211 112 aa5.75□□□□□ -1.49
CTNNA1-239ENST00000523685 STARD6P59095 220 aa5.75□□□□□ -1.49
CTNNA1-239ENST00000523685 IL2P60568 153 aa5.75□□□□□ -1.49
CTNNA1-239ENST00000523685 OCRLQ01968 901 aa5.75□□□□□ -1.49
CTNNA1-239ENST00000523685 GRIN1Q05586 938 aa5.75□□□□□ -1.49
CTNNA1-239ENST00000523685 CALCRLQ16602 461 aa5.75□□□□□ -1.49
CTNNA1-239ENST00000523685 MLANAQ16655 118 aa5.75□□□□□ -1.49
CTNNA1-239ENST00000523685 PABPC1LQ4VXU2 614 aaKnown RBP5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms