RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 AEBP2Q6ZN18 517 aaPredicted RBP19.72■□□□□ 0.75
CTNNA1-239ENST00000523685 CHIC1Q5VXU3 224 aa19.52■□□□□ 0.72
CTNNA1-239ENST00000523685 PHF23Q9BUL5 403 aaPredicted RBP17.19■□□□□ 0.34
CTNNA1-239ENST00000523685 SENP3Q9H4L4 574 aaPredicted RBP16.71■□□□□ 0.27
CTNNA1-239ENST00000523685 PLPPR3Q6T4P5 718 aa15.98■□□□□ 0.15
CTNNA1-239ENST00000523685 FOXD1Q16676 465 aa15.47■□□□□ 0.07
CTNNA1-239ENST00000523685 ADRA2BP18089 450 aa15.09■□□□□ 0.01
CTNNA1-239ENST00000523685 PPP6R1Q9UPN7 881 aa15.09■□□□□ 0.01
CTNNA1-239ENST00000523685 PIAS4Q8N2W9 510 aaPredicted RBP14.65□□□□□ -0.06
CTNNA1-239ENST00000523685 MSH5O43196 834 aa14.18□□□□□ -0.14
CTNNA1-239ENST00000523685 PPP4R3CPQ6ZMV5 832 aa14.11□□□□□ -0.15
CTNNA1-239ENST00000523685 KCNA4P22459 653 aa14.05□□□□□ -0.16
CTNNA1-239ENST00000523685 SCAF1Q9H7N4 1312 aaKnown RBP13.85□□□□□ -0.19
CTNNA1-239ENST00000523685 NCBP3Q53F19 620 aaKnown RBP13.83□□□□□ -0.2
CTNNA1-239ENST00000523685 POTEDQ86YR6 584 aa13.74□□□□□ -0.21
CTNNA1-239ENST00000523685 CNKSR2Q8WXI2 1034 aa13.66□□□□□ -0.22
CTNNA1-239ENST00000523685 MAPK8IP2Q13387 824 aaPredicted RBP13.62□□□□□ -0.23
CTNNA1-239ENST00000523685 NPM3O75607 178 aaKnown RBP13.6□□□□□ -0.23
CTNNA1-239ENST00000523685 SLC4A1APQ9BWU0 796 aaKnown RBP13.44□□□□□ -0.26
CTNNA1-239ENST00000523685 DMRT2Q9Y5R5 561 aa13.38□□□□□ -0.27
CTNNA1-239ENST00000523685 EHMT2Q96KQ7 1210 aa13.34□□□□□ -0.27
CTNNA1-239ENST00000523685 RNF216Q9NWF9 866 aaPredicted RBP13.33□□□□□ -0.28
CTNNA1-239ENST00000523685 HOXD11P31277 338 aaPredicted RBP13.21□□□□□ -0.29
CTNNA1-239ENST00000523685 DNAJC5BQ9UF47 199 aa13.18□□□□□ -0.3
CTNNA1-239ENST00000523685 CSRNP3Q8WYN3 585 aa13.08□□□□□ -0.32
CTNNA1-239ENST00000523685 NISCHQ9Y2I1 1504 aa13.03□□□□□ -0.32
CTNNA1-239ENST00000523685 ZBTB22O15209 634 aa12.92□□□□□ -0.34
CTNNA1-239ENST00000523685 FOXD4L1Q9NU39 408 aa12.87□□□□□ -0.35
CTNNA1-239ENST00000523685 DCAF8L1A6NGE4 600 aa12.8□□□□□ -0.36
CTNNA1-239ENST00000523685 SLC4A2P04920 1241 aa12.78□□□□□ -0.36
CTNNA1-239ENST00000523685 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.6□□□□□ -0.399e-8■□□□□ 9.6
CTNNA1-239ENST00000523685 MYCNP04198 464 aaPredicted RBP12.56□□□□□ -0.4
CTNNA1-239ENST00000523685 ATXN8OSP0DMR3 200 aa12.41□□□□□ -0.42
CTNNA1-239ENST00000523685 U3KPZ7 1027 aaPredicted RBP12.4□□□□□ -0.42
CTNNA1-239ENST00000523685 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.36□□□□□ -0.43
CTNNA1-239ENST00000523685 HNRNPUL2Q1KMD3 747 aaKnown RBP12.36□□□□□ -0.43
CTNNA1-239ENST00000523685 SAMD1Q6SPF0 538 aaPredicted RBP12.32□□□□□ -0.44
CTNNA1-239ENST00000523685 ATF5Q9Y2D1 282 aaPredicted RBP12.2□□□□□ -0.46
CTNNA1-239ENST00000523685 APLP2Q06481 763 aa12.17□□□□□ -0.46
CTNNA1-239ENST00000523685 RNF39Q9H2S5 420 aa12.16□□□□□ -0.46
CTNNA1-239ENST00000523685 C1QBPQ07021 282 aaKnown RBP12.05□□□□□ -0.48
CTNNA1-239ENST00000523685 ZNF219Q9P2Y4 722 aaPredicted RBP12.01□□□□□ -0.49
CTNNA1-239ENST00000523685 SPINK5Q9NQ38 1064 aaPredicted RBP11.98□□□□□ -0.49
CTNNA1-239ENST00000523685 CAPN15O75808 1086 aa11.94□□□□□ -0.5
CTNNA1-239ENST00000523685 TRHP20396 242 aaPredicted RBP11.94□□□□□ -0.5
CTNNA1-239ENST00000523685 ABCC9O60706 1549 aa11.91□□□□□ -0.5
CTNNA1-239ENST00000523685 POLA2Q14181 598 aa11.81□□□□□ -0.52
CTNNA1-239ENST00000523685 FKBP8Q14318 412 aa11.81□□□□□ -0.52
CTNNA1-239ENST00000523685 ABCB7O75027 752 aa11.71□□□□□ -0.53
CTNNA1-239ENST00000523685 FBLN2P98095 1184 aa11.7□□□□□ -0.54
CTNNA1-239ENST00000523685 CACNB1Q02641 598 aaPredicted RBP11.68□□□□□ -0.54
CTNNA1-239ENST00000523685 MKRN4PQ13434 485 aaPredicted RBP11.68□□□□□ -0.54
CTNNA1-239ENST00000523685 CCDC180Q9P1Z9 1646 aa11.68□□□□□ -0.54
CTNNA1-239ENST00000523685 DSG3P32926 999 aa11.67□□□□□ -0.54
CTNNA1-239ENST00000523685 ZBTB12Q9Y330 459 aaPredicted RBP11.63□□□□□ -0.55
CTNNA1-239ENST00000523685 SPDYE4A6NLX3 237 aa11.56□□□□□ -0.56
CTNNA1-239ENST00000523685 PROM2Q8N271 834 aa11.39□□□□□ -0.59
CTNNA1-239ENST00000523685 OSCARQ8IYS5 282 aa11.37□□□□□ -0.59
CTNNA1-239ENST00000523685 SPDYE2BA6NHP3 402 aa11.34□□□□□ -0.59
CTNNA1-239ENST00000523685 SPDYE6P0CI01 402 aa11.34□□□□□ -0.59
CTNNA1-239ENST00000523685 SPDYE2Q495Y8 402 aa11.34□□□□□ -0.59
CTNNA1-239ENST00000523685 ZNF692Q9BU19 519 aaPredicted RBP11.34□□□□□ -0.59
CTNNA1-239ENST00000523685 FBXO3Q9UK99 471 aa11.34□□□□□ -0.59
CTNNA1-239ENST00000523685 SSUH2Q9Y2M2 353 aa11.26□□□□□ -0.61
CTNNA1-239ENST00000523685 RB1CC1Q8TDY2 1594 aa11.21□□□□□ -0.61
CTNNA1-239ENST00000523685 DCAF8L2P0C7V8 631 aa11.21□□□□□ -0.61
CTNNA1-239ENST00000523685 AMER1Q5JTC6 1135 aaPredicted RBP11.21□□□□□ -0.61
CTNNA1-239ENST00000523685 PABPN1Q86U42 306 aaKnown RBP eCLIP11.19□□□□□ -0.62
CTNNA1-239ENST00000523685 RTN4Q9NQC3 1192 aaKnown RBP11.17□□□□□ -0.62
CTNNA1-239ENST00000523685 VASPP50552 380 aaPredicted RBP11.15□□□□□ -0.62
CTNNA1-239ENST00000523685 RBM42Q9BTD8 480 aaKnown RBP11.12□□□□□ -0.63
CTNNA1-239ENST00000523685 STAG3Q9UJ98 1225 aa11.1□□□□□ -0.63
CTNNA1-239ENST00000523685 NACADO15069 1562 aa11.1□□□□□ -0.63
CTNNA1-239ENST00000523685 AKT1S1Q96B36 256 aa11.04□□□□□ -0.64
CTNNA1-239ENST00000523685 IFNLR1Q8IU57 520 aaPredicted RBP11.02□□□□□ -0.65
CTNNA1-239ENST00000523685 MIER1Q8N108 512 aa10.96□□□□□ -0.65
CTNNA1-239ENST00000523685 PLCD3Q8N3E9 789 aa10.96□□□□□ -0.65
CTNNA1-239ENST00000523685 SPDYE1Q8NFV5 336 aaPredicted RBP10.95□□□□□ -0.66
CTNNA1-239ENST00000523685 REM2Q8IYK8 340 aaPredicted RBP10.93□□□□□ -0.66
CTNNA1-239ENST00000523685 KLHL34Q8N239 644 aa10.93□□□□□ -0.66
CTNNA1-239ENST00000523685 UNC13AQ9UPW8 1703 aa10.9□□□□□ -0.66
CTNNA1-239ENST00000523685 PLEKHG5O94827 1062 aa10.88□□□□□ -0.67
CTNNA1-239ENST00000523685 BICRAQ9NZM4 1560 aa10.88□□□□□ -0.67
CTNNA1-239ENST00000523685 CLEC11AQ9Y240 323 aa10.88□□□□□ -0.67
CTNNA1-239ENST00000523685 SPOCK2Q92563 424 aa10.87□□□□□ -0.67
CTNNA1-239ENST00000523685 MYO15BQ96JP2 1530 aa10.86□□□□□ -0.67
CTNNA1-239ENST00000523685 PRR29P0C7W0 189 aa10.84□□□□□ -0.67
CTNNA1-239ENST00000523685 ZBTB47Q9UFB7 747 aaPredicted RBP10.83□□□□□ -0.68
CTNNA1-239ENST00000523685 PITPNM1O00562 1244 aa10.79□□□□□ -0.68
CTNNA1-239ENST00000523685 ZCCHC6Q5VYS8 1495 aaKnown RBP10.77□□□□□ -0.69
CTNNA1-239ENST00000523685 PKD2Q13563 968 aa10.75□□□□□ -0.69
CTNNA1-239ENST00000523685 CREBZFQ9NS37 354 aa10.73□□□□□ -0.69
CTNNA1-239ENST00000523685 SCRIBQ14160 1630 aa10.73□□□□□ -0.69
CTNNA1-239ENST00000523685 CECR2Q9BXF3 1484 aa10.71□□□□□ -0.69
CTNNA1-239ENST00000523685 DCAF1Q9Y4B6 1507 aa10.7□□□□□ -0.7
CTNNA1-239ENST00000523685 CC2D2AQ9P2K1 1620 aa10.69□□□□□ -0.7
CTNNA1-239ENST00000523685 SHROOM4Q9ULL8 1493 aa10.68□□□□□ -0.7
CTNNA1-239ENST00000523685 CIZ1Q9ULV3 898 aaPredicted RBP10.66□□□□□ -0.7
CTNNA1-239ENST00000523685 ECM2O94769 699 aaPredicted RBP10.65□□□□□ -0.7
CTNNA1-239ENST00000523685 MNX1P50219 401 aaPredicted RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms