RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 SF3B4Q15427 424 aaKnown RBP eCLIP3.44□□□□□ -1.86
SCARNA13-201ENST00000516672 CHRNA6Q15825 494 aa3.44□□□□□ -1.86
SCARNA13-201ENST00000516672 MCMDC2Q4G0Z9 681 aa3.44□□□□□ -1.86
SCARNA13-201ENST00000516672 BMP2KLQ5H9B9 411 aa3.44□□□□□ -1.86
SCARNA13-201ENST00000516672 PPP4R3BQ5MIZ7 849 aa3.44□□□□□ -1.86
SCARNA13-201ENST00000516672 ZMYM1Q5SVZ6 1142 aa3.44□□□□□ -1.86
SCARNA13-201ENST00000516672 SLC8B1Q6J4K2 584 aa3.44□□□□□ -1.86
SCARNA13-201ENST00000516672 PIK3AP1Q6ZUJ8 805 aa3.44□□□□□ -1.86
SCARNA13-201ENST00000516672 PLPPR4Q7Z2D5 763 aa3.44□□□□□ -1.86
SCARNA13-201ENST00000516672 YTHDF3Q7Z739 585 aaKnown RBP3.44□□□□□ -1.86
SCARNA13-201ENST00000516672 ADGRE4PQ86SQ3 457 aa3.44□□□□□ -1.86
SCARNA13-201ENST00000516672 SPATS2Q86XZ4 545 aaKnown RBP3.44□□□□□ -1.86
SCARNA13-201ENST00000516672 CDC20BQ86Y33 519 aa3.44□□□□□ -1.86
SCARNA13-201ENST00000516672 CACUL1Q86Y37 369 aa3.44□□□□□ -1.86
SCARNA13-201ENST00000516672 C1QL4Q86Z23 238 aa3.44□□□□□ -1.86
SCARNA13-201ENST00000516672 CCDC116Q8IYX3 515 aa3.44□□□□□ -1.86
SCARNA13-201ENST00000516672 CHPFQ8IZ52 775 aa3.44□□□□□ -1.86
SCARNA13-201ENST00000516672 ZNF444Q8N0Y2 327 aaPredicted RBP3.44□□□□□ -1.86
SCARNA13-201ENST00000516672 METTL13Q8N6R0 699 aa3.44□□□□□ -1.86
SCARNA13-201ENST00000516672 GIMAP8Q8ND71 665 aaPredicted RBP3.44□□□□□ -1.86
SCARNA13-201ENST00000516672 GOT1L1Q8NHS2 421 aaPredicted RBP3.44□□□□□ -1.86
SCARNA13-201ENST00000516672 WDR48Q8TAF3 677 aa3.44□□□□□ -1.86
SCARNA13-201ENST00000516672 KCNV2Q8TDN2 545 aa3.44□□□□□ -1.86
SCARNA13-201ENST00000516672 OTUD7AQ8TE49 926 aaPredicted RBP3.44□□□□□ -1.86
SCARNA13-201ENST00000516672 DCAF4Q8WV16 495 aa3.44□□□□□ -1.86
SCARNA13-201ENST00000516672 RUFY2Q8WXA3 655 aa3.44□□□□□ -1.86
SCARNA13-201ENST00000516672 SHC3Q92529 594 aa3.44□□□□□ -1.86
SCARNA13-201ENST00000516672 PAAF1Q9BRP4 392 aa3.44□□□□□ -1.86
SCARNA13-201ENST00000516672 B3GNT4Q9C0J1 378 aa3.44□□□□□ -1.86
SCARNA13-201ENST00000516672 MKRN2Q9H000 416 aaKnown RBP3.44□□□□□ -1.86
SCARNA13-201ENST00000516672 LINC00597Q9H2U6 94 aa3.44□□□□□ -1.86
SCARNA13-201ENST00000516672 C12orf65Q9H3J6 166 aaKnown RBP3.44□□□□□ -1.86
SCARNA13-201ENST00000516672 ARMT1Q9H993 441 aa3.44□□□□□ -1.86
SCARNA13-201ENST00000516672 KIF9Q9HAQ2 790 aa3.44□□□□□ -1.86
SCARNA13-201ENST00000516672 BEX4Q9NWD9 120 aaPredicted RBP3.44□□□□□ -1.86
SCARNA13-201ENST00000516672 MARCH2Q9P0N8 246 aa3.44□□□□□ -1.86
SCARNA13-201ENST00000516672 USP25Q9UHP3 1055 aa3.44□□□□□ -1.86
SCARNA13-201ENST00000516672 SH3BGRL2Q9UJC5 107 aa3.44□□□□□ -1.86
SCARNA13-201ENST00000516672 AJAP1Q9UKB5 411 aaPredicted RBP3.44□□□□□ -1.86
SCARNA13-201ENST00000516672 MTMR7Q9Y216 660 aa3.44□□□□□ -1.86
SCARNA13-201ENST00000516672 PIN4Q9Y237 131 aaKnown RBP3.44□□□□□ -1.86
SCARNA13-201ENST00000516672 CACNA1CQ13936 2221 aa3.44□□□□□ -1.86
SCARNA13-201ENST00000516672 USF3Q68DE3 2245 aa3.43□□□□□ -1.86
SCARNA13-201ENST00000516672 STAB2Q8WWQ8 2551 aa3.43□□□□□ -1.86
SCARNA13-201ENST00000516672 PLIN4Q96Q06 1357 aa3.43□□□□□ -1.86
SCARNA13-201ENST00000516672 CDC14CA4D256 554 aa3.43□□□□□ -1.86
SCARNA13-201ENST00000516672 GSG1L2A8MUP6 293 aa3.43□□□□□ -1.86
SCARNA13-201ENST00000516672 TRIM6-TRIM34B2RNG4 842 aa3.43□□□□□ -1.86
SCARNA13-201ENST00000516672 F5H423 210 aaPredicted RBP3.43□□□□□ -1.86
SCARNA13-201ENST00000516672 TLR4O00206 839 aa3.43□□□□□ -1.86
SCARNA13-201ENST00000516672 IPO5O00410 1097 aaKnown RBP3.43□□□□□ -1.86
SCARNA13-201ENST00000516672 NTN3O00634 580 aaPredicted RBP3.43□□□□□ -1.86
SCARNA13-201ENST00000516672 WNT9AO14904 365 aa3.43□□□□□ -1.86
SCARNA13-201ENST00000516672 HBP1O60381 514 aa3.43□□□□□ -1.86
SCARNA13-201ENST00000516672 PPP1R11O60927 126 aaPredicted RBP3.43□□□□□ -1.86
SCARNA13-201ENST00000516672 SLCO2B1O94956 709 aa3.43□□□□□ -1.86
SCARNA13-201ENST00000516672 KIF4AO95239 1232 aa3.43□□□□□ -1.86
SCARNA13-201ENST00000516672 MBD4O95243 580 aa3.43□□□□□ -1.86
SCARNA13-201ENST00000516672 C22orf31O95567 290 aa3.43□□□□□ -1.86
SCARNA13-201ENST00000516672 NFATC1O95644 943 aa3.43□□□□□ -1.86
SCARNA13-201ENST00000516672 TP53P04637 393 aaPredicted RBP3.43□□□□□ -1.86
SCARNA13-201ENST00000516672 SLC3A2P08195 630 aaKnown RBP3.43□□□□□ -1.86
SCARNA13-201ENST00000516672 FGRP09769 529 aa3.43□□□□□ -1.86
SCARNA13-201ENST00000516672 PRB4P10163 310 aaPredicted RBP3.43□□□□□ -1.86
SCARNA13-201ENST00000516672 ACADMP11310 421 aa3.43□□□□□ -1.86
SCARNA13-201ENST00000516672 XRCC6P12956 609 aaKnown RBP eCLIP3.43□□□□□ -1.86
SCARNA13-201ENST00000516672 BRAFP15056 766 aa3.43□□□□□ -1.86
SCARNA13-201ENST00000516672 FGFR3P22607 806 aa3.43□□□□□ -1.86
SCARNA13-201ENST00000516672 DDIT3P35638 169 aa3.43□□□□□ -1.86
SCARNA13-201ENST00000516672 MLH1P40692 756 aa3.43□□□□□ -1.86
SCARNA13-201ENST00000516672 GPC3P51654 580 aa3.43□□□□□ -1.86
SCARNA13-201ENST00000516672 CCL11P51671 97 aa3.43□□□□□ -1.86
SCARNA13-201ENST00000516672 CLCN3P51790 818 aa3.43□□□□□ -1.86
SCARNA13-201ENST00000516672 DCAF7P61962 342 aa3.43□□□□□ -1.86
SCARNA13-201ENST00000516672 GHRHRQ02643 423 aa3.43□□□□□ -1.86
SCARNA13-201ENST00000516672 CHAF1BQ13112 559 aa3.43□□□□□ -1.86
SCARNA13-201ENST00000516672 FUT11Q495W5 492 aa3.43□□□□□ -1.86
SCARNA13-201ENST00000516672 ANO6Q4KMQ2 910 aa3.43□□□□□ -1.86
SCARNA13-201ENST00000516672 TTC22Q5TAA0 569 aa3.43□□□□□ -1.86
SCARNA13-201ENST00000516672 CASC1Q6TDU7 716 aa3.43□□□□□ -1.86
SCARNA13-201ENST00000516672 HPS6Q86YV9 775 aa3.43□□□□□ -1.86
SCARNA13-201ENST00000516672 DMRTC2Q8IXT2 367 aaPredicted RBP3.43□□□□□ -1.86
SCARNA13-201ENST00000516672 TMC2Q8TDI7 906 aa3.43□□□□□ -1.86
SCARNA13-201ENST00000516672 DDB2Q92466 427 aa3.43□□□□□ -1.86
SCARNA13-201ENST00000516672 PMEPA1Q969W9 287 aa3.43□□□□□ -1.86
SCARNA13-201ENST00000516672 SIPA1Q96FS4 1042 aa3.43□□□□□ -1.86
SCARNA13-201ENST00000516672 GABRG3Q99928 467 aa3.43□□□□□ -1.86
SCARNA13-201ENST00000516672 DSCC1Q9BVC3 393 aa3.43□□□□□ -1.86
SCARNA13-201ENST00000516672 BEX2Q9BXY8 128 aa3.43□□□□□ -1.86
SCARNA13-201ENST00000516672 ILKAPQ9H0C8 392 aaPredicted RBP3.43□□□□□ -1.86
SCARNA13-201ENST00000516672 PUS7LQ9H0K6 701 aaKnown RBP3.43□□□□□ -1.86
SCARNA13-201ENST00000516672 DNAJC25Q9H1X3 360 aa3.43□□□□□ -1.86
SCARNA13-201ENST00000516672 AZI2Q9H6S1 392 aa3.43□□□□□ -1.86
SCARNA13-201ENST00000516672 PLEKHA5Q9HAU0 1116 aa3.43□□□□□ -1.86
SCARNA13-201ENST00000516672 RTEL1Q9NZ71 1219 aa3.43□□□□□ -1.86
SCARNA13-201ENST00000516672 NLGN3Q9NZ94 848 aa3.43□□□□□ -1.86
SCARNA13-201ENST00000516672 ARPP21Q9UBL0 812 aaPredicted RBP3.43□□□□□ -1.86
SCARNA13-201ENST00000516672 ANAPC4Q9UJX5 808 aa3.43□□□□□ -1.86
SCARNA13-201ENST00000516672 PCDHA12Q9UN75 941 aa3.43□□□□□ -1.86
SCARNA13-201ENST00000516672 YIPF1Q9Y548 306 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms