RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 CPB2Q96IY4 423 aa12.8□□□□□ -0.36
COL11A1-210ENST00000512756 NDEL1Q9GZM8 345 aa12.8□□□□□ -0.36
COL11A1-210ENST00000512756 DNAJC18Q9H819 358 aa12.8□□□□□ -0.36
COL11A1-210ENST00000512756 AAASQ9NRG9 546 aa12.8□□□□□ -0.36
COL11A1-210ENST00000512756 RBM22Q9NW64 420 aaKnown RBP eCLIP12.8□□□□□ -0.36
COL11A1-210ENST00000512756 SCAF8Q9UPN6 1271 aaKnown RBP12.8□□□□□ -0.36
COL11A1-210ENST00000512756 MROH7Q68CQ1 1323 aa12.8□□□□□ -0.36
COL11A1-210ENST00000512756 ATP9AO75110 1047 aa12.8□□□□□ -0.36
COL11A1-210ENST00000512756 SASH3O75995 380 aa12.8□□□□□ -0.36
COL11A1-210ENST00000512756 PDE5AO76074 875 aa12.8□□□□□ -0.36
COL11A1-210ENST00000512756 SOX6P35712 828 aa12.8□□□□□ -0.36
COL11A1-210ENST00000512756 TMEM169Q96HH4 297 aa12.8□□□□□ -0.36
COL11A1-210ENST00000512756 MTMR9Q96QG7 549 aa12.8□□□□□ -0.36
COL11A1-210ENST00000512756 APOC4-APOC2K7ER74 178 aa12.8□□□□□ -0.36
COL11A1-210ENST00000512756 APOC2P02655 101 aa12.8□□□□□ -0.36
COL11A1-210ENST00000512756 FAM58BPP0C7Q3 252 aa12.8□□□□□ -0.36
COL11A1-210ENST00000512756 FASP25445 335 aa12.8□□□□□ -0.36
COL11A1-210ENST00000512756 CCR1P32246 355 aa12.8□□□□□ -0.36
COL11A1-210ENST00000512756 NDST1P52848 882 aa12.8□□□□□ -0.36
COL11A1-210ENST00000512756 CSE1LP55060 971 aaKnown RBP12.8□□□□□ -0.36
COL11A1-210ENST00000512756 IFI35P80217 286 aaPredicted RBP12.8□□□□□ -0.36
COL11A1-210ENST00000512756 DDX39BQ13838 428 aaKnown RBP12.8□□□□□ -0.36
COL11A1-210ENST00000512756 CCDC142Q17RM4 750 aa12.8□□□□□ -0.36
COL11A1-210ENST00000512756 MARC1Q5VT66 337 aa12.8□□□□□ -0.36
COL11A1-210ENST00000512756 ZFP1Q6P2D0 407 aa12.8□□□□□ -0.36
COL11A1-210ENST00000512756 ZNF662Q6ZS27 426 aa12.8□□□□□ -0.36
COL11A1-210ENST00000512756 ZNF467Q7Z7K2 595 aaPredicted RBP12.8□□□□□ -0.36
COL11A1-210ENST00000512756 FBXO16Q8IX29 292 aaPredicted RBP12.8□□□□□ -0.36
COL11A1-210ENST00000512756 TRPM5Q9NZQ8 1165 aa12.8□□□□□ -0.36
COL11A1-210ENST00000512756 MEGF6O75095 1541 aa12.8□□□□□ -0.36
COL11A1-210ENST00000512756 LZTS3O60299 673 aaPredicted RBP12.79□□□□□ -0.36
COL11A1-210ENST00000512756 HOXB8P17481 243 aaPredicted RBP12.79□□□□□ -0.36
COL11A1-210ENST00000512756 KYAT3Q6YP21 454 aaKnown RBP12.79□□□□□ -0.36
COL11A1-210ENST00000512756 LRRN4CLQ8ND94 238 aa12.79□□□□□ -0.36
COL11A1-210ENST00000512756 CDK5RAP1Q96SZ6 601 aaKnown RBP12.79□□□□□ -0.36
COL11A1-210ENST00000512756 VAT1Q99536 393 aa12.79□□□□□ -0.36
COL11A1-210ENST00000512756 NRDE2Q9H7Z3 1164 aa12.79□□□□□ -0.36
COL11A1-210ENST00000512756 ADGRB1O14514 1584 aa12.79□□□□□ -0.36
COL11A1-210ENST00000512756 ZMYM2Q9UBW7 1377 aa12.79□□□□□ -0.36
COL11A1-210ENST00000512756 NCF1BA6NI72 391 aaPredicted RBP12.79□□□□□ -0.36
COL11A1-210ENST00000512756 NCF1CA8MVU1 366 aaPredicted RBP12.79□□□□□ -0.36
COL11A1-210ENST00000512756 ACKR2O00590 384 aa12.79□□□□□ -0.36
COL11A1-210ENST00000512756 NCF1P14598 390 aaPredicted RBP12.79□□□□□ -0.36
COL11A1-210ENST00000512756 DSG3P32926 999 aa12.79□□□□□ -0.36
COL11A1-210ENST00000512756 SKIV2L2P42285 1042 aaKnown RBP12.79□□□□□ -0.36
COL11A1-210ENST00000512756 YWHAZP63104 245 aaKnown RBP12.79□□□□□ -0.36
COL11A1-210ENST00000512756 ILDR2Q71H61 639 aa12.79□□□□□ -0.36
COL11A1-210ENST00000512756 DNAAF5Q86Y56 855 aa12.79□□□□□ -0.36
COL11A1-210ENST00000512756 CCDC33Q8N5R6 958 aa12.79□□□□□ -0.36
COL11A1-210ENST00000512756 MSL3Q8N5Y2 521 aaKnown RBP12.79□□□□□ -0.36
COL11A1-210ENST00000512756 ETNPPLQ8TBG4 499 aa12.79□□□□□ -0.36
COL11A1-210ENST00000512756 MRPS31Q92665 395 aaKnown RBP12.79□□□□□ -0.36
COL11A1-210ENST00000512756 ZNF75CPQ92670 426 aaPredicted RBP12.79□□□□□ -0.36
COL11A1-210ENST00000512756 MAML3Q96JK9 1138 aa12.79□□□□□ -0.36
COL11A1-210ENST00000512756 NT5MQ9NPB1 228 aa12.79□□□□□ -0.36
COL11A1-210ENST00000512756 KRCC1Q9NPI7 259 aaPredicted RBP12.79□□□□□ -0.36
COL11A1-210ENST00000512756 COMMD8Q9NX08 183 aa12.79□□□□□ -0.36
COL11A1-210ENST00000512756 STARD13Q9Y3M8 1113 aa12.79□□□□□ -0.36
COL11A1-210ENST00000512756 GRIN3BO60391 1043 aa12.79□□□□□ -0.36
COL11A1-210ENST00000512756 KPNA6O60684 536 aa12.79□□□□□ -0.36
COL11A1-210ENST00000512756 KRT75O95678 551 aa12.79□□□□□ -0.36
COL11A1-210ENST00000512756 RHOCP08134 193 aa12.79□□□□□ -0.36
COL11A1-210ENST00000512756 YY1P25490 414 aa12.79□□□□□ -0.36
COL11A1-210ENST00000512756 ARL4DP49703 201 aa12.79□□□□□ -0.36
COL11A1-210ENST00000512756 RENBPP51606 427 aa12.79□□□□□ -0.36
COL11A1-210ENST00000512756 SREBF2Q12772 1141 aa12.79□□□□□ -0.36
COL11A1-210ENST00000512756 MAD2L1Q13257 205 aaPredicted RBP12.79□□□□□ -0.36
COL11A1-210ENST00000512756 SNX30Q5VWJ9 437 aa12.79□□□□□ -0.36
COL11A1-210ENST00000512756 SDE2Q6IQ49 451 aa12.79□□□□□ -0.36
COL11A1-210ENST00000512756 KCNMB4Q86W47 210 aa12.79□□□□□ -0.36
COL11A1-210ENST00000512756 OSCP1Q8WVF1 389 aa12.79□□□□□ -0.36
COL11A1-210ENST00000512756 USP6NLQ92738 828 aa12.79□□□□□ -0.36
COL11A1-210ENST00000512756 ZCWPW1Q9H0M4 648 aa12.79□□□□□ -0.36
COL11A1-210ENST00000512756 COL3A1P02461 1466 aaPredicted RBP12.79□□□□□ -0.36
COL11A1-210ENST00000512756 BTNL10A8MVZ5 291 aa12.79□□□□□ -0.36
COL11A1-210ENST00000512756 FSBPO95073 299 aa12.79□□□□□ -0.36
COL11A1-210ENST00000512756 HMGCRP04035 888 aa12.79□□□□□ -0.36
COL11A1-210ENST00000512756 SSTR1P30872 391 aa12.79□□□□□ -0.36
COL11A1-210ENST00000512756 PKN2Q16513 984 aaKnown RBP12.79□□□□□ -0.36
COL11A1-210ENST00000512756 TBCELQ5QJ74 424 aa12.79□□□□□ -0.36
COL11A1-210ENST00000512756 SYT15Q9BQS2 421 aa12.79□□□□□ -0.36
COL11A1-210ENST00000512756 CROTQ9UKG9 612 aa12.79□□□□□ -0.36
COL11A1-210ENST00000512756 SLC12A8A0AV02 714 aa12.79□□□□□ -0.36
COL11A1-210ENST00000512756 H3BRB1 525 aa12.79□□□□□ -0.36
COL11A1-210ENST00000512756 SERPINF2P08697 491 aa12.79□□□□□ -0.36
COL11A1-210ENST00000512756 ATP6V1B2P21281 511 aa12.79□□□□□ -0.36
COL11A1-210ENST00000512756 FCGRTP55899 365 aa12.79□□□□□ -0.36
COL11A1-210ENST00000512756 EFEMP1Q12805 493 aa12.79□□□□□ -0.36
COL11A1-210ENST00000512756 CTXN3Q4LDR2 81 aa12.79□□□□□ -0.36
COL11A1-210ENST00000512756 CYP4Z1Q86W10 505 aa12.79□□□□□ -0.36
COL11A1-210ENST00000512756 FAM120BQ96EK7 910 aaKnown RBP12.79□□□□□ -0.36
COL11A1-210ENST00000512756 KCTD14Q9BQ13 255 aaPredicted RBP12.79□□□□□ -0.36
COL11A1-210ENST00000512756 TUT1Q9H6E5 874 aaKnown RBP12.79□□□□□ -0.36
COL11A1-210ENST00000512756 SYBUQ9NX95 663 aa12.79□□□□□ -0.36
COL11A1-210ENST00000512756 DNPEPQ9ULA0 475 aa12.79□□□□□ -0.36
COL11A1-210ENST00000512756 ACTL7BQ9Y614 415 aa12.79□□□□□ -0.36
COL11A1-210ENST00000512756 CACNA2D1P54289 1103 aa12.78□□□□□ -0.36
COL11A1-210ENST00000512756 HUNKP57058 714 aa12.78□□□□□ -0.36
COL11A1-210ENST00000512756 CDK16Q00536 496 aa12.78□□□□□ -0.36
COL11A1-210ENST00000512756 ZNF284Q2VY69 593 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms