RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 ADGRE3Q9BY15 652 aa3.34□□□□□ -1.87
RIF1-212ENST00000498041 SAP30LQ9HAJ7 183 aa3.34□□□□□ -1.87
RIF1-212ENST00000498041 TMEM8AQ9HCN3 771 aa3.34□□□□□ -1.87
RIF1-212ENST00000498041 HELLSQ9NRZ9 838 aa3.34□□□□□ -1.87
RIF1-212ENST00000498041 DTNAQ9Y4J8 743 aa3.34□□□□□ -1.87
RIF1-212ENST00000498041 SPATA31A1Q5TZJ5 1347 aa3.34□□□□□ -1.87
RIF1-212ENST00000498041 ERCC6Q03468 1493 aa3.34□□□□□ -1.88
RIF1-212ENST00000498041 MRC2Q9UBG0 1479 aa3.34□□□□□ -1.88
RIF1-212ENST00000498041 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.33□□□□□ -1.88
RIF1-212ENST00000498041 RNF8O76064 485 aa3.33□□□□□ -1.88
RIF1-212ENST00000498041 NTSR2O95665 410 aa3.33□□□□□ -1.88
RIF1-212ENST00000498041 GLP2RO95838 553 aa3.33□□□□□ -1.88
RIF1-212ENST00000498041 MBPP02686 304 aaPredicted RBP3.33□□□□□ -1.88
RIF1-212ENST00000498041 SETSIPP0DME0 302 aa3.33□□□□□ -1.88
RIF1-212ENST00000498041 EPHB2P29323 1055 aa3.33□□□□□ -1.88
RIF1-212ENST00000498041 SERPINB3P29508 390 aa3.33□□□□□ -1.88
RIF1-212ENST00000498041 GALNSP34059 522 aa3.33□□□□□ -1.88
RIF1-212ENST00000498041 ABCG1P45844 678 aa3.33□□□□□ -1.88
RIF1-212ENST00000498041 JAK3P52333 1124 aa3.33□□□□□ -1.88
RIF1-212ENST00000498041 BFSP2Q13515 415 aa3.33□□□□□ -1.88
RIF1-212ENST00000498041 STARD3Q14849 445 aa3.33□□□□□ -1.88
RIF1-212ENST00000498041 BRD3Q15059 726 aa3.33□□□□□ -1.88
RIF1-212ENST00000498041 EZH2Q15910 746 aaKnown RBP3.33□□□□□ -1.88
RIF1-212ENST00000498041 CC2D1BQ5T0F9 858 aaKnown RBP3.33□□□□□ -1.88
RIF1-212ENST00000498041 FAM90A2PQ658T7 463 aa3.33□□□□□ -1.88
RIF1-212ENST00000498041 SLC18B1Q6NT16 456 aa3.33□□□□□ -1.88
RIF1-212ENST00000498041 CCDC144NLQ6NUI1 221 aa3.33□□□□□ -1.88
RIF1-212ENST00000498041 MIS18BP1Q6P0N0 1132 aa3.33□□□□□ -1.88
RIF1-212ENST00000498041 YTHDF3Q7Z739 585 aaKnown RBP3.33□□□□□ -1.88
RIF1-212ENST00000498041 NEK8Q86SG6 692 aa3.33□□□□□ -1.88
RIF1-212ENST00000498041 PNISRQ8TF01 805 aaKnown RBP3.33□□□□□ -1.88
RIF1-212ENST00000498041 EIF3CQ99613 913 aaKnown RBP3.33□□□□□ -1.88
RIF1-212ENST00000498041 EFHD1Q9BUP0 239 aa3.33□□□□□ -1.88
RIF1-212ENST00000498041 TTLL2Q9BWV7 592 aa3.33□□□□□ -1.88
RIF1-212ENST00000498041 QTRT1Q9BXR0 403 aaKnown RBP3.33□□□□□ -1.88
RIF1-212ENST00000498041 SEMA5BQ9P283 1151 aa3.33□□□□□ -1.88
RIF1-212ENST00000498041 WDR17Q8IZU2 1322 aa3.33□□□□□ -1.88
RIF1-212ENST00000498041 CLIP1P30622 1438 aa3.33□□□□□ -1.88
RIF1-212ENST00000498041 KIF27Q86VH2 1401 aa3.33□□□□□ -1.88
RIF1-212ENST00000498041 GOLGA3Q08378 1498 aa3.33□□□□□ -1.88
RIF1-212ENST00000498041 GAPVD1Q14C86 1478 aa3.33□□□□□ -1.88
RIF1-212ENST00000498041 LMTK3Q96Q04 1460 aa3.33□□□□□ -1.88
RIF1-212ENST00000498041 ABCA5Q8WWZ7 1642 aa3.33□□□□□ -1.88
RIF1-212ENST00000498041 CHD1O14646 1710 aa3.33□□□□□ -1.88
RIF1-212ENST00000498041 PNMA6EA0A0J9YXQ4 647 aa3.32□□□□□ -1.88
RIF1-212ENST00000498041 GOLGA6L3A6NEY3 463 aa3.32□□□□□ -1.88
RIF1-212ENST00000498041 TTC34A8MYJ7 566 aa3.32□□□□□ -1.88
RIF1-212ENST00000498041 J3KTA2 159 aa3.32□□□□□ -1.88
RIF1-212ENST00000498041 DSCR3O14972 297 aa3.32□□□□□ -1.88
RIF1-212ENST00000498041 DHHO43323 396 aa3.32□□□□□ -1.88
RIF1-212ENST00000498041 PRR35P0CG20 571 aa3.32□□□□□ -1.88
RIF1-212ENST00000498041 CDK4P11802 303 aa3.32□□□□□ -1.88
RIF1-212ENST00000498041 MATN1P21941 496 aa3.32□□□□□ -1.88
RIF1-212ENST00000498041 KELP23276 732 aa3.32□□□□□ -1.88
RIF1-212ENST00000498041 DUSP1P28562 367 aa3.32□□□□□ -1.88
RIF1-212ENST00000498041 IGHMBP2P38935 993 aaKnown RBP3.32□□□□□ -1.88
RIF1-212ENST00000498041 WDR5P61964 334 aaKnown RBP3.32□□□□□ -1.88
RIF1-212ENST00000498041 RAE1P78406 368 aaKnown RBP3.32□□□□□ -1.88
RIF1-212ENST00000498041 SLC14A1Q13336 389 aa3.32□□□□□ -1.88
RIF1-212ENST00000498041 CSHL1Q14406 222 aa3.32□□□□□ -1.88
RIF1-212ENST00000498041 ZNF268Q14587 947 aaPredicted RBP3.32□□□□□ -1.88
RIF1-212ENST00000498041 PFKFB3Q16875 520 aaPredicted RBP3.32□□□□□ -1.88
RIF1-212ENST00000498041 P3H1Q32P28 736 aa3.32□□□□□ -1.88
RIF1-212ENST00000498041 AWAT1Q58HT5 328 aa3.32□□□□□ -1.88
RIF1-212ENST00000498041 PIK3AP1Q6ZUJ8 805 aa3.32□□□□□ -1.88
RIF1-212ENST00000498041 SAMD3Q8N6K7 520 aa3.32□□□□□ -1.88
RIF1-212ENST00000498041 IPO4Q8TEX9 1081 aaKnown RBP3.32□□□□□ -1.88
RIF1-212ENST00000498041 PMM1Q92871 262 aa3.32□□□□□ -1.88
RIF1-212ENST00000498041 C18orf8Q96DM3 657 aa3.32□□□□□ -1.88
RIF1-212ENST00000498041 FAM118BQ9BPY3 351 aa3.32□□□□□ -1.88
RIF1-212ENST00000498041 SH2D3AQ9BRG2 576 aa3.32□□□□□ -1.88
RIF1-212ENST00000498041 RNF26Q9BY78 433 aaPredicted RBP3.32□□□□□ -1.88
RIF1-212ENST00000498041 NRIP3Q9NQ35 241 aa3.32□□□□□ -1.88
RIF1-212ENST00000498041 PDGFCQ9NRA1 345 aa3.32□□□□□ -1.88
RIF1-212ENST00000498041 ABHD10Q9NUJ1 306 aa3.32□□□□□ -1.88
RIF1-212ENST00000498041 CDC23Q9UJX2 597 aa3.32□□□□□ -1.88
RIF1-212ENST00000498041 VPS4AQ9UN37 437 aa3.32□□□□□ -1.88
RIF1-212ENST00000498041 MAGED2Q9UNF1 606 aaPredicted RBP3.32□□□□□ -1.88
RIF1-212ENST00000498041 LRCH1Q9Y2L9 728 aa3.32□□□□□ -1.88
RIF1-212ENST00000498041 PCDHB2Q9Y5E7 798 aa3.32□□□□□ -1.88
RIF1-212ENST00000498041 SNAPC4Q5SXM2 1469 aa3.32□□□□□ -1.88
RIF1-212ENST00000498041 MAGI3Q5TCQ9 1506 aa3.32□□□□□ -1.88
RIF1-212ENST00000498041 ABCA10Q8WWZ4 1543 aa3.32□□□□□ -1.88
RIF1-212ENST00000498041 EIF4G3O43432 1585 aaKnown RBP3.31□□□□□ -1.88
RIF1-212ENST00000498041 CEP170Q5SW79 1584 aa3.31□□□□□ -1.88
RIF1-212ENST00000498041 WDR62O43379 1518 aa3.31□□□□□ -1.88
RIF1-212ENST00000498041 ZNF804BA4D1E1 1349 aa3.31□□□□□ -1.88
RIF1-212ENST00000498041 CYP2D7A0A087X1C5 515 aa3.31□□□□□ -1.88
RIF1-212ENST00000498041 SMIM35A0A1B0GVV1 85 aa3.31□□□□□ -1.88
RIF1-212ENST00000498041 ABHD14A-ACY1A0A1B0GW23 586 aa3.31□□□□□ -1.88
RIF1-212ENST00000498041 PIP5K1BO14986 540 aa3.31□□□□□ -1.88
RIF1-212ENST00000498041 NPC1O15118 1278 aa3.31□□□□□ -1.88
RIF1-212ENST00000498041 FFAR2O15552 330 aa3.31□□□□□ -1.88
RIF1-212ENST00000498041 CTIFO43310 598 aaKnown RBP3.31□□□□□ -1.88
RIF1-212ENST00000498041 TAF5LO75529 589 aa3.31□□□□□ -1.88
RIF1-212ENST00000498041 ANXA6P08133 673 aa3.31□□□□□ -1.88
RIF1-212ENST00000498041 SLC3A2P08195 630 aaKnown RBP3.31□□□□□ -1.88
RIF1-212ENST00000498041 NPPBP16860 134 aa3.31□□□□□ -1.88
RIF1-212ENST00000498041 IL6STP40189 918 aaPredicted RBP3.31□□□□□ -1.88
RIF1-212ENST00000498041 KRTAP10-9P60411 292 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms