RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 TLX3O43711 291 aaPredicted RBP4.98□□□□□ -1.61
SMC4-219ENST00000487747 UGDHO60701 494 aa4.98□□□□□ -1.61
SMC4-219ENST00000487747 INMTO95050 263 aa4.98□□□□□ -1.61
SMC4-219ENST00000487747 ZBED1O96006 694 aa4.98□□□□□ -1.61
SMC4-219ENST00000487747 HRGP04196 525 aa4.98□□□□□ -1.61
SMC4-219ENST00000487747 U2AF1L5P0DN76 240 aaPredicted RBP4.98□□□□□ -1.61
SMC4-219ENST00000487747 ARP10275 920 aa4.98□□□□□ -1.61
SMC4-219ENST00000487747 U2AF1Q01081 240 aaKnown RBP eCLIP4.98□□□□□ -1.615e-12■■■■■ 47.2
SMC4-219ENST00000487747 KCNJ12Q14500 433 aa4.98□□□□□ -1.61
SMC4-219ENST00000487747 PPP2R5AQ15172 486 aa4.98□□□□□ -1.61
SMC4-219ENST00000487747 PLEKHG6Q3KR16 790 aa4.98□□□□□ -1.61
SMC4-219ENST00000487747 NUGGCQ68CJ6 796 aa4.98□□□□□ -1.61
SMC4-219ENST00000487747 SMRP1Q8NCR6 262 aa4.98□□□□□ -1.61
SMC4-219ENST00000487747 B4GALNT2Q8NHY0 566 aa4.98□□□□□ -1.61
SMC4-219ENST00000487747 APOL5Q9BWW9 433 aa4.98□□□□□ -1.61
SMC4-219ENST00000487747 ASNSD1Q9NWL6 643 aa4.98□□□□□ -1.61
SMC4-219ENST00000487747 PCDHA12Q9UN75 941 aa4.98□□□□□ -1.61
SMC4-219ENST00000487747 PROCRQ9UNN8 238 aa4.98□□□□□ -1.61
SMC4-219ENST00000487747 CTIFO43310 598 aaKnown RBP4.97□□□□□ -1.61
SMC4-219ENST00000487747 PLA2G2AP14555 144 aa4.97□□□□□ -1.61
SMC4-219ENST00000487747 ATICP31939 592 aa4.97□□□□□ -1.61
SMC4-219ENST00000487747 CNGA3Q16281 694 aa4.97□□□□□ -1.61
SMC4-219ENST00000487747 PRTGQ2VWP7 1150 aa4.97□□□□□ -1.61
SMC4-219ENST00000487747 ZNF585BQ52M93 769 aa4.97□□□□□ -1.61
SMC4-219ENST00000487747 RFX8Q6ZV50 586 aa4.97□□□□□ -1.61
SMC4-219ENST00000487747 RFX6Q8HWS3 928 aa4.97□□□□□ -1.61
SMC4-219ENST00000487747 BCAS4Q8TDM0 211 aa4.97□□□□□ -1.61
SMC4-219ENST00000487747 VSTM5A8MXK1 200 aa4.96□□□□□ -1.62
SMC4-219ENST00000487747 MGEA5O60502 916 aa4.96□□□□□ -1.62
SMC4-219ENST00000487747 ATG13O75143 517 aa4.96□□□□□ -1.62
SMC4-219ENST00000487747 HOXB2P14652 356 aa4.96□□□□□ -1.62
SMC4-219ENST00000487747 IL6STP40189 918 aaPredicted RBP4.96□□□□□ -1.62
SMC4-219ENST00000487747 SOX2P48431 317 aa4.96□□□□□ -1.62
SMC4-219ENST00000487747 SEMA5AQ13591 1074 aa4.96□□□□□ -1.62
SMC4-219ENST00000487747 ABLIM2Q6H8Q1 611 aa4.96□□□□□ -1.62
SMC4-219ENST00000487747 CYB5RLQ6IPT4 315 aa4.96□□□□□ -1.62
SMC4-219ENST00000487747 LVRNQ6Q4G3 990 aa4.96□□□□□ -1.62
SMC4-219ENST00000487747 DLK2Q6UY11 383 aa4.96□□□□□ -1.62
SMC4-219ENST00000487747 RNF44Q7L0R7 432 aa4.96□□□□□ -1.62
SMC4-219ENST00000487747 IPCEF1Q8WWN9 437 aaPredicted RBP4.96□□□□□ -1.62
SMC4-219ENST00000487747 CELF1Q92879 486 aaKnown RBP4.96□□□□□ -1.62
SMC4-219ENST00000487747 THOC3Q96J01 351 aaKnown RBP4.96□□□□□ -1.62
SMC4-219ENST00000487747 CTAGE1Q96RT6 745 aa4.96□□□□□ -1.62
SMC4-219ENST00000487747 WDR24Q96S15 920 aa4.96□□□□□ -1.62
SMC4-219ENST00000487747 ZPBPQ9BS86 351 aa4.96□□□□□ -1.62
SMC4-219ENST00000487747 MRPL44Q9H9J2 332 aaKnown RBP4.96□□□□□ -1.62
SMC4-219ENST00000487747 DRD1P21728 446 aa4.95□□□□□ -1.62
SMC4-219ENST00000487747 NDUFS1P28331 727 aa4.95□□□□□ -1.62
SMC4-219ENST00000487747 HOXD12P35452 270 aa4.95□□□□□ -1.62
SMC4-219ENST00000487747 FAM193AP78312 1265 aa4.95□□□□□ -1.62
SMC4-219ENST00000487747 PPATQ06203 517 aa4.95□□□□□ -1.62
SMC4-219ENST00000487747 FAM90A2PQ658T7 463 aa4.95□□□□□ -1.62
SMC4-219ENST00000487747 CRTC1Q6UUV9 634 aa4.95□□□□□ -1.62
SMC4-219ENST00000487747 KYAT3Q6YP21 454 aaKnown RBP4.95□□□□□ -1.62
SMC4-219ENST00000487747 SRGAP1Q7Z6B7 1085 aa4.95□□□□□ -1.62
SMC4-219ENST00000487747 ADGRF4Q8IZF3 695 aa4.95□□□□□ -1.62
SMC4-219ENST00000487747 AKAP1Q92667 903 aaKnown RBP eCLIP4.95□□□□□ -1.624e-24■■■■■ 140.6
SMC4-219ENST00000487747 STRBPQ96SI9 672 aaKnown RBP4.95□□□□□ -1.62
SMC4-219ENST00000487747 TUBB6Q9BUF5 446 aa4.95□□□□□ -1.62
SMC4-219ENST00000487747 FRMPD2Q68DX3 1309 aaPredicted RBP4.95□□□□□ -1.62
SMC4-219ENST00000487747 SLC28A2O43868 658 aa4.94□□□□□ -1.62
SMC4-219ENST00000487747 IL18RAPO95256 599 aa4.94□□□□□ -1.62
SMC4-219ENST00000487747 ANXA2P07355 339 aaKnown RBP4.94□□□□□ -1.62
SMC4-219ENST00000487747 RHCEP18577 417 aa4.94□□□□□ -1.62
SMC4-219ENST00000487747 DUSP1P28562 367 aa4.94□□□□□ -1.62
SMC4-219ENST00000487747 ARRB2P32121 409 aa4.94□□□□□ -1.62
SMC4-219ENST00000487747 ZNF84P51523 738 aa4.94□□□□□ -1.62
SMC4-219ENST00000487747 SLC12A2P55011 1212 aa4.94□□□□□ -1.62
SMC4-219ENST00000487747 RHDQ02161 417 aa4.94□□□□□ -1.62
SMC4-219ENST00000487747 BFSP2Q13515 415 aa4.94□□□□□ -1.62
SMC4-219ENST00000487747 TMEM196Q5HYL7 178 aa4.94□□□□□ -1.62
SMC4-219ENST00000487747 KLHDC7AQ5VTJ3 777 aa4.94□□□□□ -1.62
SMC4-219ENST00000487747 TTLL5Q6EMB2 1281 aa4.94□□□□□ -1.62
SMC4-219ENST00000487747 B4GALNT4Q76KP1 1039 aa4.94□□□□□ -1.62
SMC4-219ENST00000487747 SDR16C5Q8N3Y7 309 aa4.94□□□□□ -1.62
SMC4-219ENST00000487747 TMEM199Q8N511 208 aa4.94□□□□□ -1.62
SMC4-219ENST00000487747 ARL14EPQ8N8R7 260 aaPredicted RBP4.94□□□□□ -1.62
SMC4-219ENST00000487747 SLC44A5Q8NCS7 719 aa4.94□□□□□ -1.62
SMC4-219ENST00000487747 SPATA3Q8NHX4 192 aa4.94□□□□□ -1.62
SMC4-219ENST00000487747 GJA10Q969M2 543 aa4.94□□□□□ -1.62
SMC4-219ENST00000487747 EME1Q96AY2 570 aa4.94□□□□□ -1.62
SMC4-219ENST00000487747 ZNF479Q96JC4 524 aa4.94□□□□□ -1.62
SMC4-219ENST00000487747 PIMREGQ9BSJ6 248 aa4.94□□□□□ -1.62
SMC4-219ENST00000487747 ZCWPW1Q9H0M4 648 aa4.94□□□□□ -1.62
SMC4-219ENST00000487747 HEYLQ9NQ87 328 aaPredicted RBP4.94□□□□□ -1.62
SMC4-219ENST00000487747 THSD1Q9NS62 852 aa4.94□□□□□ -1.62
SMC4-219ENST00000487747 DECR2Q9NUI1 292 aa4.94□□□□□ -1.62
SMC4-219ENST00000487747 C4orf47A7E2U8 309 aa4.93□□□□□ -1.62
SMC4-219ENST00000487747 F8W810 466 aa4.93□□□□□ -1.62
SMC4-219ENST00000487747 M0QZQ0 153 aa4.93□□□□□ -1.62
SMC4-219ENST00000487747 TSPAN6O43657 245 aa4.93□□□□□ -1.62
SMC4-219ENST00000487747 SYF2O95926 243 aaKnown RBP4.93□□□□□ -1.62
SMC4-219ENST00000487747 T-ENOLP0DO92 83 aa4.93□□□□□ -1.62
SMC4-219ENST00000487747 IGHMBP2P38935 993 aaKnown RBP4.93□□□□□ -1.62
SMC4-219ENST00000487747 STAT6P42226 847 aa4.93□□□□□ -1.62
SMC4-219ENST00000487747 ALDH7A1P49419 539 aaKnown RBP4.93□□□□□ -1.62
SMC4-219ENST00000487747 AGTR2P50052 363 aa4.93□□□□□ -1.62
SMC4-219ENST00000487747 DGKQP52824 942 aa4.93□□□□□ -1.62
SMC4-219ENST00000487747 GBX1Q14549 363 aa4.93□□□□□ -1.62
SMC4-219ENST00000487747 PGM5Q15124 567 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms