RNA–Protein interactions for RNA: ENST00000462489.1

CNOT11-203, Transcript of CCR4-NOT transcription complex subunit 11, humanhuman

TSL 2

Gene CNOT11, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11-203ENST00000462489 ARHGAP15Q53QZ3 475 aa3.2□□□□□ -1.9
CNOT11-203ENST00000462489 LRCH2Q5VUJ6 765 aa3.2□□□□□ -1.9
CNOT11-203ENST00000462489 ACSM6Q6P461 480 aa3.2□□□□□ -1.9
CNOT11-203ENST00000462489 TTC30AQ86WT1 665 aa3.2□□□□□ -1.9
CNOT11-203ENST00000462489 RASGRP3Q8IV61 690 aa3.2□□□□□ -1.9
CNOT11-203ENST00000462489 CCDC146Q8IYE0 955 aa3.2□□□□□ -1.9
CNOT11-203ENST00000462489 C16orf71Q8IYS4 520 aaPredicted RBP3.2□□□□□ -1.9
CNOT11-203ENST00000462489 ACRBPQ8NEB7 543 aa3.2□□□□□ -1.9
CNOT11-203ENST00000462489 OSR1Q8TAX0 266 aaPredicted RBP3.2□□□□□ -1.9
CNOT11-203ENST00000462489 SMG7Q92540 1137 aaKnown RBP3.2□□□□□ -1.9
CNOT11-203ENST00000462489 RSC1A1Q92681 617 aa3.2□□□□□ -1.9
CNOT11-203ENST00000462489 PMM1Q92871 262 aa3.2□□□□□ -1.9
CNOT11-203ENST00000462489 RPL36ALQ969Q0 106 aaKnown RBP3.2□□□□□ -1.9
CNOT11-203ENST00000462489 KIAA1191Q96A73 305 aa3.2□□□□□ -1.9
CNOT11-203ENST00000462489 COQ8BQ96D53 544 aa3.2□□□□□ -1.9
CNOT11-203ENST00000462489 PRR11Q96HE9 360 aaPredicted RBP3.2□□□□□ -1.9
CNOT11-203ENST00000462489 NAF1Q96HR8 494 aaKnown RBP3.2□□□□□ -1.9
CNOT11-203ENST00000462489 SH2D3AQ9BRG2 576 aa3.2□□□□□ -1.9
CNOT11-203ENST00000462489 TTLL2Q9BWV7 592 aa3.2□□□□□ -1.9
CNOT11-203ENST00000462489 GATA5Q9BWX5 397 aaPredicted RBP3.2□□□□□ -1.9
CNOT11-203ENST00000462489 NUAK2Q9H093 628 aa3.2□□□□□ -1.9
CNOT11-203ENST00000462489 ARFGAP3Q9NP61 516 aa3.2□□□□□ -1.9
CNOT11-203ENST00000462489 PDGFCQ9NRA1 345 aa3.2□□□□□ -1.9
CNOT11-203ENST00000462489 CHST12Q9NRB3 414 aa3.2□□□□□ -1.9
CNOT11-203ENST00000462489 SLC52A1Q9NWF4 448 aa3.2□□□□□ -1.9
CNOT11-203ENST00000462489 TUBA8Q9NY65 449 aaPredicted RBP3.2□□□□□ -1.9
CNOT11-203ENST00000462489 NFU1Q9UMS0 254 aa3.2□□□□□ -1.9
CNOT11-203ENST00000462489 PCDHGB2Q9Y5G2 931 aa3.2□□□□□ -1.9
CNOT11-203ENST00000462489 CCDC187A0A096LP49 1063 aa3.19□□□□□ -1.9
CNOT11-203ENST00000462489 GOLGA6L3A6NEY3 463 aa3.19□□□□□ -1.9
CNOT11-203ENST00000462489 NPC1O15118 1278 aa3.19□□□□□ -1.9
CNOT11-203ENST00000462489 TP73O15350 636 aa3.19□□□□□ -1.9
CNOT11-203ENST00000462489 CNOT3O75175 753 aaKnown RBP3.19□□□□□ -1.9
CNOT11-203ENST00000462489 MOSPD3O75425 235 aa3.19□□□□□ -1.9
CNOT11-203ENST00000462489 SGPL1O95470 568 aa3.19□□□□□ -1.9
CNOT11-203ENST00000462489 SRGAP2BP0DMP2 458 aa3.19□□□□□ -1.9
CNOT11-203ENST00000462489 NPPBP16860 134 aa3.19□□□□□ -1.9
CNOT11-203ENST00000462489 ABCB4P21439 1286 aa3.19□□□□□ -1.9
CNOT11-203ENST00000462489 DRD1P21728 446 aa3.19□□□□□ -1.9
CNOT11-203ENST00000462489 LMO1P25800 156 aa3.19□□□□□ -1.9
CNOT11-203ENST00000462489 TACR3P29371 465 aa3.19□□□□□ -1.9
CNOT11-203ENST00000462489 HOXD12P35452 270 aa3.19□□□□□ -1.9
CNOT11-203ENST00000462489 PPM1AP35813 382 aa3.19□□□□□ -1.9
CNOT11-203ENST00000462489 TECP42680 631 aa3.19□□□□□ -1.9
CNOT11-203ENST00000462489 ZNF81P51508 661 aa3.19□□□□□ -1.9
CNOT11-203ENST00000462489 GHRHRQ02643 423 aa3.19□□□□□ -1.9
CNOT11-203ENST00000462489 SRSF1Q07955 248 aaKnown RBP eCLIP3.19□□□□□ -1.9
CNOT11-203ENST00000462489 UBE4AQ14139 1066 aa3.19□□□□□ -1.9
CNOT11-203ENST00000462489 CNGA3Q16281 694 aa3.19□□□□□ -1.9
CNOT11-203ENST00000462489 GLE1Q53GS7 698 aaKnown RBP3.19□□□□□ -1.9
CNOT11-203ENST00000462489 AWAT1Q58HT5 328 aa3.19□□□□□ -1.9
CNOT11-203ENST00000462489 CC2D1BQ5T0F9 858 aaKnown RBP3.19□□□□□ -1.9
CNOT11-203ENST00000462489 MSANTD2Q6P1R3 559 aa3.19□□□□□ -1.9
CNOT11-203ENST00000462489 LAS2Q8IYD9 372 aa3.19□□□□□ -1.9
CNOT11-203ENST00000462489 SYTL1Q8IYJ3 562 aa3.19□□□□□ -1.9
CNOT11-203ENST00000462489 SLC39A13Q96H72 371 aa3.19□□□□□ -1.9
CNOT11-203ENST00000462489 ZNF845Q96IR2 970 aaPredicted RBP3.19□□□□□ -1.9
CNOT11-203ENST00000462489 ZNF778Q96MU6 729 aa3.19□□□□□ -1.9
CNOT11-203ENST00000462489 SIGLEC11Q96RL6 698 aa3.19□□□□□ -1.9
CNOT11-203ENST00000462489 SLC29A3Q9BZD2 475 aa3.19□□□□□ -1.9
CNOT11-203ENST00000462489 CDCP1Q9H5V8 836 aa3.19□□□□□ -1.9
CNOT11-203ENST00000462489 AGO4Q9HCK5 861 aaKnown RBP3.19□□□□□ -1.9
CNOT11-203ENST00000462489 PI4KBQ9UBF8 816 aa3.19□□□□□ -1.9
CNOT11-203ENST00000462489 SLC39A10Q9ULF5 831 aa3.19□□□□□ -1.9
CNOT11-203ENST00000462489 UBE2J1Q9Y385 318 aaPredicted RBP3.19□□□□□ -1.9
CNOT11-203ENST00000462489 PNMA6EA0A0J9YXQ4 647 aa3.18□□□□□ -1.9
CNOT11-203ENST00000462489 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.18□□□□□ -1.9
CNOT11-203ENST00000462489 CCDC194A0A1B0GVG4 234 aa3.18□□□□□ -1.9
CNOT11-203ENST00000462489 C16orf96A6NNT2 1141 aa3.18□□□□□ -1.9
CNOT11-203ENST00000462489 KCNU1A8MYU2 1149 aa3.18□□□□□ -1.9
CNOT11-203ENST00000462489 J3KTA2 159 aa3.18□□□□□ -1.9
CNOT11-203ENST00000462489 PRYO14603 147 aa3.18□□□□□ -1.9
CNOT11-203ENST00000462489 PCDH17O14917 1159 aa3.18□□□□□ -1.9
CNOT11-203ENST00000462489 FFAR2O15552 330 aa3.18□□□□□ -1.9
CNOT11-203ENST00000462489 TAF5LO75529 589 aa3.18□□□□□ -1.9
CNOT11-203ENST00000462489 TOP3BO95985 862 aaKnown RBP3.18□□□□□ -1.9
CNOT11-203ENST00000462489 ANXA6P08133 673 aa3.18□□□□□ -1.9
CNOT11-203ENST00000462489 CD63P08962 238 aa3.18□□□□□ -1.9
CNOT11-203ENST00000462489 SETSIPP0DME0 302 aa3.18□□□□□ -1.9
CNOT11-203ENST00000462489 PTGER1P34995 402 aa3.18□□□□□ -1.9
CNOT11-203ENST00000462489 ZNF84P51523 738 aa3.18□□□□□ -1.9
CNOT11-203ENST00000462489 BFSP2Q13515 415 aa3.18□□□□□ -1.9
CNOT11-203ENST00000462489 CBFBQ13951 182 aa3.18□□□□□ -1.9
CNOT11-203ENST00000462489 PTK2BQ14289 1009 aa3.18□□□□□ -1.9
CNOT11-203ENST00000462489 TWIST1Q15672 202 aa3.18□□□□□ -1.9
CNOT11-203ENST00000462489 C10orf25Q5T742 122 aa3.18□□□□□ -1.9
CNOT11-203ENST00000462489 PAPD7Q5XG87 772 aaKnown RBP3.18□□□□□ -1.9
CNOT11-203ENST00000462489 SLC2A7Q6PXP3 512 aa3.18□□□□□ -1.9
CNOT11-203ENST00000462489 MORC1Q86VD1 984 aa3.18□□□□□ -1.9
CNOT11-203ENST00000462489 NRSN1Q8IZ57 195 aa3.18□□□□□ -1.9
CNOT11-203ENST00000462489 SAMD3Q8N6K7 520 aa3.18□□□□□ -1.9
CNOT11-203ENST00000462489 PRSS3P2Q8NHM4 247 aa3.18□□□□□ -1.9
CNOT11-203ENST00000462489 C16orf52Q8NHV5 167 aa3.18□□□□□ -1.9
CNOT11-203ENST00000462489 DENND1AQ8TEH3 1009 aa3.18□□□□□ -1.9
CNOT11-203ENST00000462489 WDR60Q8WVS4 1066 aa3.18□□□□□ -1.9
CNOT11-203ENST00000462489 ASB12Q8WXK4 309 aa3.18□□□□□ -1.9
CNOT11-203ENST00000462489 AKAP1Q92667 903 aaKnown RBP eCLIP3.18□□□□□ -1.9
CNOT11-203ENST00000462489 CUL5Q93034 780 aa3.18□□□□□ -1.9
CNOT11-203ENST00000462489 EID2BQ96D98 161 aa3.18□□□□□ -1.9
CNOT11-203ENST00000462489 EIF3CQ99613 913 aaKnown RBP3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms