RNA–Protein interactions for RNA: ENST00000462489.1

CNOT11-203, Transcript of CCR4-NOT transcription complex subunit 11, humanhuman

TSL 2

Gene CNOT11, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11-203ENST00000462489 AEBP2Q6ZN18 517 aaPredicted RBP17■□□□□ 0.31
CNOT11-203ENST00000462489 CHIC1Q5VXU3 224 aa15.83■□□□□ 0.12
CNOT11-203ENST00000462489 SENP3Q9H4L4 574 aaPredicted RBP14.37□□□□□ -0.11
CNOT11-203ENST00000462489 PHF23Q9BUL5 403 aaPredicted RBP14.24□□□□□ -0.13
CNOT11-203ENST00000462489 FOXD1Q16676 465 aa13.53□□□□□ -0.24
CNOT11-203ENST00000462489 POTEDQ86YR6 584 aa12.82□□□□□ -0.36
CNOT11-203ENST00000462489 MSH5O43196 834 aa12.63□□□□□ -0.39
CNOT11-203ENST00000462489 PPP6R1Q9UPN7 881 aa12.56□□□□□ -0.4
CNOT11-203ENST00000462489 PLPPR3Q6T4P5 718 aa12.55□□□□□ -0.4
CNOT11-203ENST00000462489 PIAS4Q8N2W9 510 aaPredicted RBP12.52□□□□□ -0.41
CNOT11-203ENST00000462489 ADRA2BP18089 450 aa12.45□□□□□ -0.42
CNOT11-203ENST00000462489 MAPK8IP2Q13387 824 aaPredicted RBP11.55□□□□□ -0.56
CNOT11-203ENST00000462489 DMRT2Q9Y5R5 561 aa11.41□□□□□ -0.58
CNOT11-203ENST00000462489 SCAF1Q9H7N4 1312 aaKnown RBP11.23□□□□□ -0.61
CNOT11-203ENST00000462489 PPP4R3CPQ6ZMV5 832 aa11.04□□□□□ -0.64
CNOT11-203ENST00000462489 CACNB1Q02641 598 aaPredicted RBP11.01□□□□□ -0.65
CNOT11-203ENST00000462489 DCAF8L1A6NGE4 600 aa10.92□□□□□ -0.66
CNOT11-203ENST00000462489 HOXD11P31277 338 aaPredicted RBP10.91□□□□□ -0.66
CNOT11-203ENST00000462489 RNF39Q9H2S5 420 aa10.83□□□□□ -0.68
CNOT11-203ENST00000462489 CNKSR2Q8WXI2 1034 aa10.79□□□□□ -0.68
CNOT11-203ENST00000462489 RNF216Q9NWF9 866 aaPredicted RBP10.74□□□□□ -0.69
CNOT11-203ENST00000462489 NCBP3Q53F19 620 aaKnown RBP10.71□□□□□ -0.69
CNOT11-203ENST00000462489 KCNA4P22459 653 aa10.66□□□□□ -0.7
CNOT11-203ENST00000462489 C1QBPQ07021 282 aaKnown RBP10.6□□□□□ -0.71
CNOT11-203ENST00000462489 NPM3O75607 178 aaKnown RBP10.52□□□□□ -0.73
CNOT11-203ENST00000462489 DNAJC5BQ9UF47 199 aa10.51□□□□□ -0.73
CNOT11-203ENST00000462489 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.34□□□□□ -0.75
CNOT11-203ENST00000462489 U3KPZ7 1027 aaPredicted RBP10.17□□□□□ -0.78
CNOT11-203ENST00000462489 SLC4A1APQ9BWU0 796 aaKnown RBP10.16□□□□□ -0.78
CNOT11-203ENST00000462489 SPINK5Q9NQ38 1064 aaPredicted RBP10.12□□□□□ -0.79
CNOT11-203ENST00000462489 DSG3P32926 999 aa10.08□□□□□ -0.8
CNOT11-203ENST00000462489 SLC4A2P04920 1241 aa10.04□□□□□ -0.8
CNOT11-203ENST00000462489 CAPN15O75808 1086 aa10.02□□□□□ -0.81
CNOT11-203ENST00000462489 POTEHQ6S545 545 aa9.97□□□□□ -0.81
CNOT11-203ENST00000462489 FOXD4L1Q9NU39 408 aa9.85□□□□□ -0.83
CNOT11-203ENST00000462489 TRHP20396 242 aaPredicted RBP9.83□□□□□ -0.84
CNOT11-203ENST00000462489 ABCB7O75027 752 aa9.82□□□□□ -0.84
CNOT11-203ENST00000462489 ZBTB22O15209 634 aa9.81□□□□□ -0.84
CNOT11-203ENST00000462489 EHMT2Q96KQ7 1210 aa9.78□□□□□ -0.84
CNOT11-203ENST00000462489 CSRNP3Q8WYN3 585 aa9.75□□□□□ -0.85
CNOT11-203ENST00000462489 MYCNP04198 464 aaPredicted RBP9.74□□□□□ -0.85
CNOT11-203ENST00000462489 ZNF219Q9P2Y4 722 aaPredicted RBP9.73□□□□□ -0.85
CNOT11-203ENST00000462489 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.7□□□□□ -0.86
CNOT11-203ENST00000462489 HNRNPUL2Q1KMD3 747 aaKnown RBP9.7□□□□□ -0.86
CNOT11-203ENST00000462489 SAMD1Q6SPF0 538 aaPredicted RBP9.68□□□□□ -0.86
CNOT11-203ENST00000462489 APLP2Q06481 763 aa9.66□□□□□ -0.86
CNOT11-203ENST00000462489 ATXN8OSP0DMR3 200 aa9.58□□□□□ -0.88
CNOT11-203ENST00000462489 POLA2Q14181 598 aa9.54□□□□□ -0.88
CNOT11-203ENST00000462489 ATF5Q9Y2D1 282 aaPredicted RBP9.53□□□□□ -0.88
CNOT11-203ENST00000462489 RBM42Q9BTD8 480 aaKnown RBP9.49□□□□□ -0.89
CNOT11-203ENST00000462489 CHRDL2Q6WN34 429 aa9.46□□□□□ -0.9
CNOT11-203ENST00000462489 AKT1S1Q96B36 256 aa9.28□□□□□ -0.92
CNOT11-203ENST00000462489 REM2Q8IYK8 340 aaPredicted RBP9.25□□□□□ -0.93
CNOT11-203ENST00000462489 OSCARQ8IYS5 282 aa9.24□□□□□ -0.93
CNOT11-203ENST00000462489 PIP4P2Q8N4L2 257 aa9.23□□□□□ -0.93
CNOT11-203ENST00000462489 SP7Q8TDD2 431 aaPredicted RBP9.23□□□□□ -0.93
CNOT11-203ENST00000462489 ZBTB12Q9Y330 459 aaPredicted RBP9.21□□□□□ -0.94
CNOT11-203ENST00000462489 PITPNM1O00562 1244 aa9.16□□□□□ -0.94
CNOT11-203ENST00000462489 FXR2P51116 673 aaKnown RBP eCLIP9.13□□□□□ -0.95
CNOT11-203ENST00000462489 EVX2Q03828 476 aa9.09□□□□□ -0.95
CNOT11-203ENST00000462489 MKRN4PQ13434 485 aaPredicted RBP9.09□□□□□ -0.95
CNOT11-203ENST00000462489 FBLN2P98095 1184 aa9.08□□□□□ -0.96
CNOT11-203ENST00000462489 HAX1O00165 279 aa9.07□□□□□ -0.96
CNOT11-203ENST00000462489 SPDYE2BA6NHP3 402 aa8.97□□□□□ -0.97
CNOT11-203ENST00000462489 SPDYE6P0CI01 402 aa8.97□□□□□ -0.97
CNOT11-203ENST00000462489 SPDYE2Q495Y8 402 aa8.97□□□□□ -0.97
CNOT11-203ENST00000462489 PRKAR2AP13861 404 aaKnown RBP8.9□□□□□ -0.98
CNOT11-203ENST00000462489 SSUH2Q9Y2M2 353 aa8.9□□□□□ -0.98
CNOT11-203ENST00000462489 ZNF692Q9BU19 519 aaPredicted RBP8.88□□□□□ -0.99
CNOT11-203ENST00000462489 CLEC11AQ9Y240 323 aa8.87□□□□□ -0.99
CNOT11-203ENST00000462489 C19orf67A6NJJ6 358 aa8.84□□□□□ -0.99
CNOT11-203ENST00000462489 SPDYE1Q8NFV5 336 aaPredicted RBP8.84□□□□□ -0.99
CNOT11-203ENST00000462489 SPDYE4A6NLX3 237 aa8.83□□□□□ -1
CNOT11-203ENST00000462489 CHADLQ6NUI6 762 aa8.8□□□□□ -1
CNOT11-203ENST00000462489 GABBR2O75899 941 aa8.78□□□□□ -1
CNOT11-203ENST00000462489 FKBP8Q14318 412 aa8.78□□□□□ -1
CNOT11-203ENST00000462489 PABPN1Q86U42 306 aaKnown RBP eCLIP8.77□□□□□ -1.01
CNOT11-203ENST00000462489 PROM2Q8N271 834 aa8.75□□□□□ -1.01
CNOT11-203ENST00000462489 PRR29P0C7W0 189 aa8.69□□□□□ -1.02
CNOT11-203ENST00000462489 POTEIP0CG38 1075 aa8.66□□□□□ -1.02
CNOT11-203ENST00000462489 LHX8Q68G74 356 aa8.66□□□□□ -1.02
CNOT11-203ENST00000462489 STAG3Q9UJ98 1225 aa8.6□□□□□ -1.03
CNOT11-203ENST00000462489 FARP1Q9Y4F1 1045 aaPredicted RBP8.6□□□□□ -1.03
CNOT11-203ENST00000462489 CD44P16070 742 aaKnown RBP8.58□□□□□ -1.04
CNOT11-203ENST00000462489 FBXO3Q9UK99 471 aa8.56□□□□□ -1.04
CNOT11-203ENST00000462489 CREBZFQ9NS37 354 aa8.5□□□□□ -1.05
CNOT11-203ENST00000462489 ZNF579Q8NAF0 562 aaKnown RBP8.44□□□□□ -1.06
CNOT11-203ENST00000462489 ZRANB1Q9UGI0 708 aa8.44□□□□□ -1.06
CNOT11-203ENST00000462489 CLCN6P51797 869 aa8.42□□□□□ -1.06
CNOT11-203ENST00000462489 GALR2O43603 387 aaPredicted RBP8.41□□□□□ -1.06
CNOT11-203ENST00000462489 DCBLD2Q96PD2 775 aa8.41□□□□□ -1.06
CNOT11-203ENST00000462489 VASPP50552 380 aaPredicted RBP8.4□□□□□ -1.06
CNOT11-203ENST00000462489 MNX1P50219 401 aaPredicted RBP8.39□□□□□ -1.07
CNOT11-203ENST00000462489 POTEB2H3BUK9 544 aa8.38□□□□□ -1.07
CNOT11-203ENST00000462489 PLEKHG5O94827 1062 aa8.36□□□□□ -1.07
CNOT11-203ENST00000462489 MIER1Q8N108 512 aa8.36□□□□□ -1.07
CNOT11-203ENST00000462489 OTUD5Q96G74 571 aa8.35□□□□□ -1.07
CNOT11-203ENST00000462489 PLCD3Q8N3E9 789 aa8.34□□□□□ -1.07
CNOT11-203ENST00000462489 PHF12Q96QT6 1004 aa8.34□□□□□ -1.07
CNOT11-203ENST00000462489 PELP1Q8IZL8 1130 aaKnown RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms