RNA–Protein interactions for RNA: ENST00000458649.6

AMBRA1-202, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 2 BASIC

Gene AMBRA1, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-202ENST00000458649 NCKAP1LP55160 1127 aa11.03□□□□□ -0.64
AMBRA1-202ENST00000458649 MYL6P60660 151 aa11.03□□□□□ -0.64
AMBRA1-202ENST00000458649 GRIK3Q13003 919 aa11.03□□□□□ -0.64
AMBRA1-202ENST00000458649 DNAL1Q4LDG9 190 aa11.03□□□□□ -0.64
AMBRA1-202ENST00000458649 RINLQ6ZS11 566 aa11.03□□□□□ -0.64
AMBRA1-202ENST00000458649 TMA16Q96EY4 203 aaKnown RBP11.03□□□□□ -0.64
AMBRA1-202ENST00000458649 ZFYVE19Q96K21 471 aa11.03□□□□□ -0.64
AMBRA1-202ENST00000458649 SPG21Q9NZD8 308 aa11.03□□□□□ -0.64
AMBRA1-202ENST00000458649 PHLPP1O60346 1717 aa11.03□□□□□ -0.64
AMBRA1-202ENST00000458649 ROBO3Q96MS0 1386 aa11.03□□□□□ -0.64
AMBRA1-202ENST00000458649 A0A0A6YYK5 440 aaPredicted RBP11.03□□□□□ -0.64
AMBRA1-202ENST00000458649 FAM47DPA6NHR8 397 aa11.03□□□□□ -0.64
AMBRA1-202ENST00000458649 RAMP2O60895 175 aa11.03□□□□□ -0.64
AMBRA1-202ENST00000458649 DUSP11O75319 330 aaKnown RBP11.03□□□□□ -0.64
AMBRA1-202ENST00000458649 SKAP2O75563 359 aaPredicted RBP11.03□□□□□ -0.64
AMBRA1-202ENST00000458649 PSMD10O75832 226 aa11.03□□□□□ -0.64
AMBRA1-202ENST00000458649 RPN2P04844 631 aa11.03□□□□□ -0.64
AMBRA1-202ENST00000458649 CHKAP35790 457 aa11.03□□□□□ -0.64
AMBRA1-202ENST00000458649 PPP3CCP48454 512 aa11.03□□□□□ -0.64
AMBRA1-202ENST00000458649 MCL1Q07820 350 aa11.03□□□□□ -0.64
AMBRA1-202ENST00000458649 ITGA7Q13683 1181 aa11.03□□□□□ -0.64
AMBRA1-202ENST00000458649 KRT72Q14CN4 511 aa11.03□□□□□ -0.64
AMBRA1-202ENST00000458649 WDR93Q6P2C0 686 aa11.03□□□□□ -0.64
AMBRA1-202ENST00000458649 SLC13A5Q86YT5 568 aaPredicted RBP11.03□□□□□ -0.64
AMBRA1-202ENST00000458649 PPTC7Q8NI37 304 aa11.03□□□□□ -0.64
AMBRA1-202ENST00000458649 NLNQ9BYT8 704 aa11.03□□□□□ -0.64
AMBRA1-202ENST00000458649 CLPBQ9H078 707 aa11.03□□□□□ -0.64
AMBRA1-202ENST00000458649 BLOC1S6Q9UL45 172 aa11.03□□□□□ -0.64
AMBRA1-202ENST00000458649 SMG5Q9UPR3 1016 aaKnown RBP11.03□□□□□ -0.64
AMBRA1-202ENST00000458649 OCM2P0CE71 109 aa11.03□□□□□ -0.64
AMBRA1-202ENST00000458649 OCMP0CE72 109 aaPredicted RBP11.03□□□□□ -0.64
AMBRA1-202ENST00000458649 HLA-DPA1P20036 260 aa11.03□□□□□ -0.64
AMBRA1-202ENST00000458649 AKAP5P24588 427 aa11.03□□□□□ -0.64
AMBRA1-202ENST00000458649 CYP2C18P33260 490 aa11.03□□□□□ -0.64
AMBRA1-202ENST00000458649 KCNJ1P48048 391 aa11.03□□□□□ -0.64
AMBRA1-202ENST00000458649 PLD3Q8IV08 490 aa11.03□□□□□ -0.64
AMBRA1-202ENST00000458649 KLHL23Q8NBE8 558 aa11.03□□□□□ -0.64
AMBRA1-202ENST00000458649 MIEF2Q96C03 454 aa11.03□□□□□ -0.64
AMBRA1-202ENST00000458649 NAF1Q96HR8 494 aaKnown RBP11.03□□□□□ -0.64
AMBRA1-202ENST00000458649 RBM15Q96T37 977 aaKnown RBP eCLIP11.03□□□□□ -0.646e-7■■■■■ 28.6
AMBRA1-202ENST00000458649 VPS51Q9UID3 782 aa11.03□□□□□ -0.64
AMBRA1-202ENST00000458649 TNFSF13BQ9Y275 285 aa11.03□□□□□ -0.64
AMBRA1-202ENST00000458649 TMEM191CA6NGB0 347 aa11.02□□□□□ -0.64
AMBRA1-202ENST00000458649 BTBD19C9JJ37 291 aa11.02□□□□□ -0.64
AMBRA1-202ENST00000458649 ZBTB39O15060 712 aa11.02□□□□□ -0.64
AMBRA1-202ENST00000458649 RECQL4O94761 1208 aa11.02□□□□□ -0.64
AMBRA1-202ENST00000458649 MAPK8P45983 427 aa11.02□□□□□ -0.64
AMBRA1-202ENST00000458649 FNDC3BQ53EP0 1204 aaKnown RBP11.02□□□□□ -0.64
AMBRA1-202ENST00000458649 SPDYAQ5MJ70 313 aa11.02□□□□□ -0.64
AMBRA1-202ENST00000458649 CCDC103Q8IW40 242 aa11.02□□□□□ -0.64
AMBRA1-202ENST00000458649 FAM172AQ8WUF8 416 aa11.02□□□□□ -0.64
AMBRA1-202ENST00000458649 GAD1Q99259 594 aa11.02□□□□□ -0.64
AMBRA1-202ENST00000458649 CCDC78A2IDD5 438 aa11.02□□□□□ -0.65
AMBRA1-202ENST00000458649 CBX4O00257 560 aa11.02□□□□□ -0.65
AMBRA1-202ENST00000458649 NBNO60934 754 aa11.02□□□□□ -0.65
AMBRA1-202ENST00000458649 AGTP01019 485 aa11.02□□□□□ -0.65
AMBRA1-202ENST00000458649 HIRAP54198 1017 aaPredicted RBP11.02□□□□□ -0.65
AMBRA1-202ENST00000458649 BTKQ06187 659 aa11.02□□□□□ -0.65
AMBRA1-202ENST00000458649 PLCL1Q15111 1095 aa11.02□□□□□ -0.65
AMBRA1-202ENST00000458649 TRIP10Q15642 601 aa11.02□□□□□ -0.65
AMBRA1-202ENST00000458649 C1orf186Q6ZWK4 172 aa11.02□□□□□ -0.65
AMBRA1-202ENST00000458649 PNKPQ96T60 521 aa11.02□□□□□ -0.65
AMBRA1-202ENST00000458649 MLXIPLQ9NP71 852 aa11.02□□□□□ -0.65
AMBRA1-202ENST00000458649 UBIAD1Q9Y5Z9 338 aa11.02□□□□□ -0.65
AMBRA1-202ENST00000458649 FAM208AQ9UK61 1670 aaKnown RBP11.02□□□□□ -0.65
AMBRA1-202ENST00000458649 OR6C75A6NL08 312 aa11.02□□□□□ -0.65
AMBRA1-202ENST00000458649 ZNF839A8K0R7 811 aa11.02□□□□□ -0.65
AMBRA1-202ENST00000458649 SUPT3HB4E1H0 165 aa11.02□□□□□ -0.65
AMBRA1-202ENST00000458649 FAM47E-STBD1D6RA91 191 aa11.02□□□□□ -0.65
AMBRA1-202ENST00000458649 SERPINF2P08697 491 aa11.02□□□□□ -0.65
AMBRA1-202ENST00000458649 EIF2B2P49770 351 aaKnown RBP11.02□□□□□ -0.65
AMBRA1-202ENST00000458649 APLP1P51693 650 aa11.02□□□□□ -0.65
AMBRA1-202ENST00000458649 SOX10P56693 466 aa11.02□□□□□ -0.65
AMBRA1-202ENST00000458649 MEA1Q16626 185 aa11.02□□□□□ -0.65
AMBRA1-202ENST00000458649 SLC39A12Q504Y0 691 aa11.02□□□□□ -0.65
AMBRA1-202ENST00000458649 CEP78Q5JTW2 689 aa11.02□□□□□ -0.65
AMBRA1-202ENST00000458649 MAP4K3Q8IVH8 894 aa11.02□□□□□ -0.65
AMBRA1-202ENST00000458649 RSPH1Q8WYR4 309 aa11.02□□□□□ -0.65
AMBRA1-202ENST00000458649 DNAJC19Q96DA6 116 aa11.02□□□□□ -0.65
AMBRA1-202ENST00000458649 UBE2OQ9C0C9 1292 aaKnown RBP11.02□□□□□ -0.65
AMBRA1-202ENST00000458649 AP4E1Q9UPM8 1137 aa11.02□□□□□ -0.65
AMBRA1-202ENST00000458649 AFDNP55196 1824 aaKnown RBP11.02□□□□□ -0.65
AMBRA1-202ENST00000458649 WNT7AO00755 349 aa11.02□□□□□ -0.65
AMBRA1-202ENST00000458649 RASSF9O75901 435 aa11.02□□□□□ -0.65
AMBRA1-202ENST00000458649 CDC25CP30307 473 aa11.02□□□□□ -0.65
AMBRA1-202ENST00000458649 ATP5C1P36542 298 aaKnown RBP11.02□□□□□ -0.65
AMBRA1-202ENST00000458649 PRKAA1Q13131 559 aa11.02□□□□□ -0.65
AMBRA1-202ENST00000458649 PPIL6Q8IXY8 311 aa11.02□□□□□ -0.65
AMBRA1-202ENST00000458649 BLOC1S5Q8TDH9 187 aa11.02□□□□□ -0.65
AMBRA1-202ENST00000458649 LENG9Q96B70 501 aa11.02□□□□□ -0.65
AMBRA1-202ENST00000458649 ZNF541Q9H0D2 1346 aa11.02□□□□□ -0.65
AMBRA1-202ENST00000458649 CDH16O75309 829 aa11.01□□□□□ -0.65
AMBRA1-202ENST00000458649 PMPCBO75439 489 aa11.01□□□□□ -0.65
AMBRA1-202ENST00000458649 GLUD1P00367 558 aa11.01□□□□□ -0.65
AMBRA1-202ENST00000458649 SNHG28P0DPA3 235 aa11.01□□□□□ -0.65
AMBRA1-202ENST00000458649 COILP38432 576 aaPredicted RBP11.01□□□□□ -0.65
AMBRA1-202ENST00000458649 HALP42357 657 aa11.01□□□□□ -0.65
AMBRA1-202ENST00000458649 FAM83EQ2M2I3 478 aa11.01□□□□□ -0.65
AMBRA1-202ENST00000458649 ZC3H12BQ5HYM0 836 aaKnown RBP11.01□□□□□ -0.65
AMBRA1-202ENST00000458649 NLRP9Q7RTR0 991 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms