RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 MARK1Q9P0L2 795 aa16.52■□□□□ 0.24
CHCHD3-204ENST00000457942 EVLQ9UI08 416 aaPredicted RBP16.52■□□□□ 0.24
CHCHD3-204ENST00000457942 TSPAN16Q9UKR8 245 aa16.52■□□□□ 0.24
CHCHD3-204ENST00000457942 ZNF510Q9Y2H8 683 aa16.52■□□□□ 0.24
CHCHD3-204ENST00000457942 USP3Q9Y6I4 520 aa16.52■□□□□ 0.24
CHCHD3-204ENST00000457942 ADAMTS9Q9P2N4 1935 aa16.52■□□□□ 0.23
CHCHD3-204ENST00000457942 IGSF10Q6WRI0 2623 aa16.51■□□□□ 0.23
CHCHD3-204ENST00000457942 SMG1Q96Q15 3661 aaKnown RBP16.51■□□□□ 0.23
CHCHD3-204ENST00000457942 ITPKAP23677 461 aa16.51■□□□□ 0.23
CHCHD3-204ENST00000457942 TBXAS1P24557 533 aaPredicted RBP16.51■□□□□ 0.23
CHCHD3-204ENST00000457942 NTSR1P30989 418 aa16.51■□□□□ 0.23
CHCHD3-204ENST00000457942 CORO1AP31146 461 aaKnown RBP16.51■□□□□ 0.23
CHCHD3-204ENST00000457942 P2RY2P41231 377 aa16.51■□□□□ 0.23
CHCHD3-204ENST00000457942 TKTL1P51854 596 aa16.51■□□□□ 0.23
CHCHD3-204ENST00000457942 YWHAGP61981 247 aaKnown RBP eCLIP16.51■□□□□ 0.23
CHCHD3-204ENST00000457942 Q6ZNB5 142 aa16.51■□□□□ 0.23
CHCHD3-204ENST00000457942 TOGARAM2Q6ZUX3 1019 aa16.51■□□□□ 0.23
CHCHD3-204ENST00000457942 ZC3H3Q8IXZ2 948 aaKnown RBP16.51■□□□□ 0.23
CHCHD3-204ENST00000457942 ANKRD52Q8NB46 1076 aa16.51■□□□□ 0.23
CHCHD3-204ENST00000457942 IPO9Q96P70 1041 aaKnown RBP16.51■□□□□ 0.23
CHCHD3-204ENST00000457942 DCLK3Q9C098 648 aa16.51■□□□□ 0.23
CHCHD3-204ENST00000457942 METTL14Q9HCE5 456 aaKnown RBP16.51■□□□□ 0.23
CHCHD3-204ENST00000457942 MARCH2Q9P0N8 246 aa16.51■□□□□ 0.23
CHCHD3-204ENST00000457942 ASCC3Q8N3C0 2202 aaKnown RBP16.51■□□□□ 0.23
CHCHD3-204ENST00000457942 CACNA1EQ15878 2313 aa16.51■□□□□ 0.23
CHCHD3-204ENST00000457942 SLC12A8A0AV02 714 aa16.5■□□□□ 0.23
CHCHD3-204ENST00000457942 ZBED1O96006 694 aa16.5■□□□□ 0.23
CHCHD3-204ENST00000457942 CHRM1P11229 460 aaPredicted RBP16.5■□□□□ 0.23
CHCHD3-204ENST00000457942 PPP1R2P41236 205 aa16.5■□□□□ 0.23
CHCHD3-204ENST00000457942 MCCD1P59942 119 aaPredicted RBP16.5■□□□□ 0.23
CHCHD3-204ENST00000457942 PDE4CQ08493 712 aa16.5■□□□□ 0.23
CHCHD3-204ENST00000457942 ADIGQ0VDE8 80 aa16.5■□□□□ 0.23
CHCHD3-204ENST00000457942 BST2Q10589 180 aaKnown RBP16.5■□□□□ 0.23
CHCHD3-204ENST00000457942 SYT12Q8IV01 421 aa16.5■□□□□ 0.23
CHCHD3-204ENST00000457942 SIX6OS1Q8N1H7 587 aa16.5■□□□□ 0.23
CHCHD3-204ENST00000457942 HDDC3Q8N4P3 179 aa16.5■□□□□ 0.23
CHCHD3-204ENST00000457942 OLIG1Q8TAK6 271 aa16.5■□□□□ 0.23
CHCHD3-204ENST00000457942 SLC35C1Q96A29 364 aa16.5■□□□□ 0.23
CHCHD3-204ENST00000457942 DHTKD1Q96HY7 919 aaPredicted RBP16.5■□□□□ 0.23
CHCHD3-204ENST00000457942 NT5C1BQ96P26 610 aa16.5■□□□□ 0.23
CHCHD3-204ENST00000457942 ULBP1Q9BZM6 244 aa16.5■□□□□ 0.23
CHCHD3-204ENST00000457942 UBXN6Q9BZV1 441 aa16.5■□□□□ 0.23
CHCHD3-204ENST00000457942 MAN1B1Q9UKM7 699 aa16.5■□□□□ 0.23
CHCHD3-204ENST00000457942 COQ4Q9Y3A0 265 aa16.5■□□□□ 0.23
CHCHD3-204ENST00000457942 PLXND1Q9Y4D7 1925 aa16.5■□□□□ 0.23
CHCHD3-204ENST00000457942 CEP192Q8TEP8 1941 aa16.49■□□□□ 0.23
CHCHD3-204ENST00000457942 TULP2O00295 520 aa16.49■□□□□ 0.23
CHCHD3-204ENST00000457942 XPO1O14980 1071 aaKnown RBP16.49■□□□□ 0.23
CHCHD3-204ENST00000457942 CYBBP04839 570 aa16.49■□□□□ 0.23
CHCHD3-204ENST00000457942 CHKAP35790 457 aa16.49■□□□□ 0.23
CHCHD3-204ENST00000457942 FMO5P49326 533 aa16.49■□□□□ 0.23
CHCHD3-204ENST00000457942 CETN1Q12798 172 aa16.49■□□□□ 0.23
CHCHD3-204ENST00000457942 SEMA3BQ13214 749 aa16.49■□□□□ 0.23
CHCHD3-204ENST00000457942 COL28A1Q2UY09 1125 aa16.49■□□□□ 0.23
CHCHD3-204ENST00000457942 RAB41Q5JT25 222 aa16.49■□□□□ 0.23
CHCHD3-204ENST00000457942 TMEM270Q6UE05 265 aa16.49■□□□□ 0.23
CHCHD3-204ENST00000457942 PIP4P1Q86T03 277 aa16.49■□□□□ 0.23
CHCHD3-204ENST00000457942 PROSER1Q86XN7 944 aa16.49■□□□□ 0.23
CHCHD3-204ENST00000457942 DENND1CQ8IV53 801 aa16.49■□□□□ 0.23
CHCHD3-204ENST00000457942 ZNF276Q8N554 614 aa16.49■□□□□ 0.23
CHCHD3-204ENST00000457942 SPATA20Q8TB22 786 aa16.49■□□□□ 0.23
CHCHD3-204ENST00000457942 UBA3Q8TBC4 463 aa16.49■□□□□ 0.23
CHCHD3-204ENST00000457942 RNF139Q8WU17 664 aa16.49■□□□□ 0.23
CHCHD3-204ENST00000457942 NELFBQ8WX92 580 aa16.49■□□□□ 0.23
CHCHD3-204ENST00000457942 CEP63Q96MT8 703 aa16.49■□□□□ 0.23
CHCHD3-204ENST00000457942 CAMK1GQ96NX5 476 aa16.49■□□□□ 0.23
CHCHD3-204ENST00000457942 ACOX2Q99424 681 aa16.49■□□□□ 0.23
CHCHD3-204ENST00000457942 CACNA2D2Q9NY47 1150 aa16.49■□□□□ 0.23
CHCHD3-204ENST00000457942 CALCOCO1Q9P1Z2 691 aa16.49■□□□□ 0.23
CHCHD3-204ENST00000457942 CTNND2Q9UQB3 1225 aa16.49■□□□□ 0.23
CHCHD3-204ENST00000457942 STARD13Q9Y3M8 1113 aa16.49■□□□□ 0.23
CHCHD3-204ENST00000457942 PCDHB4Q9Y5E5 795 aa16.49■□□□□ 0.23
CHCHD3-204ENST00000457942 BICDL2A1A5D9 508 aa16.48■□□□□ 0.23
CHCHD3-204ENST00000457942 PRRT4C9JH25 899 aa16.48■□□□□ 0.23
CHCHD3-204ENST00000457942 BIN1O00499 593 aa16.48■□□□□ 0.23
CHCHD3-204ENST00000457942 KLKB1P03952 638 aa16.48■□□□□ 0.23
CHCHD3-204ENST00000457942 VDRP11473 427 aa16.48■□□□□ 0.23
CHCHD3-204ENST00000457942 GABRG2P18507 467 aa16.48■□□□□ 0.23
CHCHD3-204ENST00000457942 RPL6Q02878 288 aaKnown RBP16.48■□□□□ 0.23
CHCHD3-204ENST00000457942 MAP7D1Q3KQU3 841 aa16.48■□□□□ 0.23
CHCHD3-204ENST00000457942 PDZD3Q86UT5 571 aa16.48■□□□□ 0.23
CHCHD3-204ENST00000457942 PPM1KQ8N3J5 372 aa16.48■□□□□ 0.23
CHCHD3-204ENST00000457942 MINDY1Q8N5J2 469 aa16.48■□□□□ 0.23
CHCHD3-204ENST00000457942 NDRG1Q92597 394 aaKnown RBP16.48■□□□□ 0.23
CHCHD3-204ENST00000457942 PLD4Q96BZ4 506 aa16.48■□□□□ 0.23
CHCHD3-204ENST00000457942 OLA1Q9NTK5 396 aaKnown RBP16.48■□□□□ 0.23
CHCHD3-204ENST00000457942 AGO1Q9UL18 857 aaKnown RBP16.48■□□□□ 0.23
CHCHD3-204ENST00000457942 RAD54BQ9Y620 910 aa16.48■□□□□ 0.23
CHCHD3-204ENST00000457942 ADAMTS20P59510 1910 aa16.48■□□□□ 0.23
CHCHD3-204ENST00000457942 CELSR3Q9NYQ7 3312 aa16.47■□□□□ 0.23
CHCHD3-204ENST00000457942 AP5Z1O43299 807 aa16.47■□□□□ 0.23
CHCHD3-204ENST00000457942 SETSIPP0DME0 302 aa16.47■□□□□ 0.23
CHCHD3-204ENST00000457942 LCP1P13796 627 aa16.47■□□□□ 0.23
CHCHD3-204ENST00000457942 CD44P16070 742 aaKnown RBP16.47■□□□□ 0.23
CHCHD3-204ENST00000457942 SCAPQ12770 1279 aa16.47■□□□□ 0.23
CHCHD3-204ENST00000457942 STARD3Q14849 445 aa16.47■□□□□ 0.23
CHCHD3-204ENST00000457942 SOWAHCQ53LP3 525 aaPredicted RBP16.47■□□□□ 0.23
CHCHD3-204ENST00000457942 SLC23A3Q6PIS1 610 aa16.47■□□□□ 0.23
CHCHD3-204ENST00000457942 KIAA1324Q6UXG2 1013 aaKnown RBP16.47■□□□□ 0.23
CHCHD3-204ENST00000457942 SLC36A4Q6YBV0 504 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms