RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 CDH17Q12864 832 aa16.28■□□□□ 0.2
PTPN13-204ENST00000436978 FCGR1AP12314 374 aa16.28■□□□□ 0.2
PTPN13-204ENST00000436978 BTG3Q14201 252 aaPredicted RBP16.28■□□□□ 0.2
PTPN13-204ENST00000436978 ZCCHC8Q6NZY4 707 aaKnown RBP16.28■□□□□ 0.2
PTPN13-204ENST00000436978 WDR93Q6P2C0 686 aa16.28■□□□□ 0.2
PTPN13-204ENST00000436978 GGT7Q9UJ14 662 aa16.28■□□□□ 0.2
PTPN13-204ENST00000436978 VPS4BO75351 444 aa16.28■□□□□ 0.2
PTPN13-204ENST00000436978 RRM1P23921 792 aa16.28■□□□□ 0.2
PTPN13-204ENST00000436978 MPP3Q13368 585 aa16.28■□□□□ 0.2
PTPN13-204ENST00000436978 CAPRIN2Q6IMN6 1127 aaKnown RBP16.28■□□□□ 0.2
PTPN13-204ENST00000436978 SLC26A11Q86WA9 606 aa16.28■□□□□ 0.2
PTPN13-204ENST00000436978 TMEM121Q9BTD3 319 aa16.28■□□□□ 0.2
PTPN13-204ENST00000436978 RBAK-RBAKDNI3L0D1 243 aa16.28■□□□□ 0.2
PTPN13-204ENST00000436978 STAU1O95793 577 aaKnown RBP16.28■□□□□ 0.2
PTPN13-204ENST00000436978 POMCP01189 267 aa16.28■□□□□ 0.2
PTPN13-204ENST00000436978 PPP2R1BP30154 601 aa16.28■□□□□ 0.2
PTPN13-204ENST00000436978 TMEM245Q9H330 911 aa16.28■□□□□ 0.2
PTPN13-204ENST00000436978 TMCO1Q9UM00 188 aa16.28■□□□□ 0.2
PTPN13-204ENST00000436978 SHOC2Q9UQ13 582 aa16.28■□□□□ 0.2
PTPN13-204ENST00000436978 MAGEC3Q8TD91 643 aa16.28■□□□□ 0.2
PTPN13-204ENST00000436978 RAD18Q9NS91 495 aa16.28■□□□□ 0.2
PTPN13-204ENST00000436978 SPG21Q9NZD8 308 aa16.28■□□□□ 0.2
PTPN13-204ENST00000436978 PHTF1Q9UMS5 762 aa16.28■□□□□ 0.2
PTPN13-204ENST00000436978 RAD51BO15315 384 aa16.27■□□□□ 0.2
PTPN13-204ENST00000436978 RASSF9O75901 435 aa16.27■□□□□ 0.2
PTPN13-204ENST00000436978 PGAM1P18669 254 aa16.27■□□□□ 0.2
PTPN13-204ENST00000436978 ICE2Q659A1 982 aa16.27■□□□□ 0.2
PTPN13-204ENST00000436978 PPP1R16AQ96I34 528 aa16.27■□□□□ 0.2
PTPN13-204ENST00000436978 PPP1R10Q96QC0 940 aaKnown RBP16.27■□□□□ 0.2
PTPN13-204ENST00000436978 GPAMQ9HCL2 828 aa16.27■□□□□ 0.2
PTPN13-204ENST00000436978 NFASCO94856 1347 aa16.27■□□□□ 0.2
PTPN13-204ENST00000436978 CYP3A4P08684 503 aa16.27■□□□□ 0.2
PTPN13-204ENST00000436978 TKTP29401 623 aaKnown RBP16.27■□□□□ 0.2
PTPN13-204ENST00000436978 SERPINB5P36952 375 aa16.27■□□□□ 0.2
PTPN13-204ENST00000436978 MCOLN2Q8IZK6 566 aa16.27■□□□□ 0.2
PTPN13-204ENST00000436978 TSPAN18Q96SJ8 248 aa16.27■□□□□ 0.2
PTPN13-204ENST00000436978 VPS51Q9UID3 782 aa16.27■□□□□ 0.2
PTPN13-204ENST00000436978 FAM131BQ86XD5 332 aa16.27■□□□□ 0.2
PTPN13-204ENST00000436978 RIOX2Q8IUF8 465 aa16.27■□□□□ 0.2
PTPN13-204ENST00000436978 ARID3BQ8IVW6 561 aaPredicted RBP16.27■□□□□ 0.2
PTPN13-204ENST00000436978 MED8Q96G25 268 aa16.27■□□□□ 0.2
PTPN13-204ENST00000436978 USE1Q9NZ43 259 aa16.27■□□□□ 0.2
PTPN13-204ENST00000436978 FGF10O15520 208 aaPredicted RBP16.27■□□□□ 0.2
PTPN13-204ENST00000436978 SOX6P35712 828 aa16.27■□□□□ 0.2
PTPN13-204ENST00000436978 ACTN3Q08043 901 aaPredicted RBP16.27■□□□□ 0.2
PTPN13-204ENST00000436978 WDR48Q8TAF3 677 aa16.27■□□□□ 0.2
PTPN13-204ENST00000436978 IL17RBQ9NRM6 502 aa16.27■□□□□ 0.2
PTPN13-204ENST00000436978 CHORDC1Q9UHD1 332 aaPredicted RBP16.27■□□□□ 0.2
PTPN13-204ENST00000436978 FAXCQ5TGI0 409 aa16.27■□□□□ 0.19
PTPN13-204ENST00000436978 PAFAH2Q99487 392 aa16.27■□□□□ 0.19
PTPN13-204ENST00000436978 MRIQ9BWK5 157 aa16.27■□□□□ 0.19
PTPN13-204ENST00000436978 ELOVL6Q9H5J4 265 aa16.27■□□□□ 0.19
PTPN13-204ENST00000436978 TMEM134Q9H6X4 195 aa16.27■□□□□ 0.19
PTPN13-204ENST00000436978 PADI4Q9UM07 663 aa16.27■□□□□ 0.19
PTPN13-204ENST00000436978 DAB1O75553 588 aa16.27■□□□□ 0.19
PTPN13-204ENST00000436978 SV2AQ7L0J3 742 aa16.27■□□□□ 0.19
PTPN13-204ENST00000436978 ZMAT2Q96NC0 199 aaKnown RBP16.27■□□□□ 0.19
PTPN13-204ENST00000436978 FTHL17Q9BXU8 183 aa16.27■□□□□ 0.19
PTPN13-204ENST00000436978 ADGRA3Q8IWK6 1321 aa16.27■□□□□ 0.19
PTPN13-204ENST00000436978 DNAJB2P25686 324 aa16.27■□□□□ 0.19
PTPN13-204ENST00000436978 NPY2RP49146 381 aa16.27■□□□□ 0.19
PTPN13-204ENST00000436978 PKN1Q16512 942 aa16.27■□□□□ 0.19
PTPN13-204ENST00000436978 TRIM60Q495X7 471 aa16.27■□□□□ 0.19
PTPN13-204ENST00000436978 INTS13Q9NVM9 706 aa16.27■□□□□ 0.19
PTPN13-204ENST00000436978 CACNA2D2Q9NY47 1150 aa16.27■□□□□ 0.19
PTPN13-204ENST00000436978 TK2O00142 265 aa16.26■□□□□ 0.19
PTPN13-204ENST00000436978 MTA2O94776 668 aa16.26■□□□□ 0.19
PTPN13-204ENST00000436978 HMGCRP04035 888 aa16.26■□□□□ 0.19
PTPN13-204ENST00000436978 OR56A5P0C7T3 313 aa16.26■□□□□ 0.19
PTPN13-204ENST00000436978 KCNA3P22001 575 aa16.26■□□□□ 0.19
PTPN13-204ENST00000436978 SCNN1BP51168 640 aa16.26■□□□□ 0.19
PTPN13-204ENST00000436978 MGAT5Q09328 741 aa16.26■□□□□ 0.19
PTPN13-204ENST00000436978 PABPC1LQ4VXU2 614 aaKnown RBP16.26■□□□□ 0.19
PTPN13-204ENST00000436978 STARD8Q92502 1023 aa16.26■□□□□ 0.19
PTPN13-204ENST00000436978 TBL1YQ9BQ87 522 aa16.26■□□□□ 0.19
PTPN13-204ENST00000436978 ZCCHC17Q9NP64 241 aaKnown RBP16.26■□□□□ 0.19
PTPN13-204ENST00000436978 BATF3Q9NR55 127 aa16.26■□□□□ 0.19
PTPN13-204ENST00000436978 VTI1BQ9UEU0 232 aa16.26■□□□□ 0.19
PTPN13-204ENST00000436978 ACOT9Q9Y305 439 aa16.26■□□□□ 0.19
PTPN13-204ENST00000436978 CLK1P49759 484 aaKnown RBP16.26■□□□□ 0.19
PTPN13-204ENST00000436978 RARRES1P49788 294 aa16.26■□□□□ 0.19
PTPN13-204ENST00000436978 TRIP10Q15642 601 aa16.26■□□□□ 0.19
PTPN13-204ENST00000436978 GALNT4Q8N4A0 578 aa16.26■□□□□ 0.19
PTPN13-204ENST00000436978 RIN3Q8TB24 985 aa16.26■□□□□ 0.19
PTPN13-204ENST00000436978 ZCWPW1Q9H0M4 648 aa16.26■□□□□ 0.19
PTPN13-204ENST00000436978 MYH7P12883 1935 aa16.26■□□□□ 0.19
PTPN13-204ENST00000436978 PRKAA1Q13131 559 aa16.26■□□□□ 0.19
PTPN13-204ENST00000436978 IKBKEQ14164 716 aa16.26■□□□□ 0.19
PTPN13-204ENST00000436978 PAPD7Q5XG87 772 aaKnown RBP16.26■□□□□ 0.19
PTPN13-204ENST00000436978 SCARA3Q6AZY7 606 aa16.26■□□□□ 0.19
PTPN13-204ENST00000436978 MYH8P13535 1937 aa16.26■□□□□ 0.19
PTPN13-204ENST00000436978 COL14A1Q05707 1796 aaKnown RBP16.26■□□□□ 0.19
PTPN13-204ENST00000436978 SLC9A3R1O14745 358 aaPredicted RBP16.26■□□□□ 0.19
PTPN13-204ENST00000436978 NT5DC1Q5TFE4 455 aa16.26■□□□□ 0.19
PTPN13-204ENST00000436978 DDX42Q86XP3 938 aaKnown RBP eCLIP16.26■□□□□ 0.19
PTPN13-204ENST00000436978 ABCC13Q9NSE7 274 aa16.26■□□□□ 0.19
PTPN13-204ENST00000436978 ADCY6O43306 1168 aa16.26■□□□□ 0.19
PTPN13-204ENST00000436978 HIRAP54198 1017 aaPredicted RBP16.26■□□□□ 0.19
PTPN13-204ENST00000436978 CHRNB3Q05901 458 aa16.26■□□□□ 0.19
PTPN13-204ENST00000436978 CCDC149Q6ZUS6 474 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms