RNA–Protein interactions for RNA: ENST00000403136.1

CEACAM1-206, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-206ENST00000403136 ROR1Q01973 937 aa13.79□□□□□ -0.2
CEACAM1-206ENST00000403136 DSG1Q02413 1049 aa13.79□□□□□ -0.2
CEACAM1-206ENST00000403136 DHX9Q08211 1270 aaKnown RBP13.79□□□□□ -0.2
CEACAM1-206ENST00000403136 PPIGQ13427 754 aaKnown RBP eCLIP13.79□□□□□ -0.2
CEACAM1-206ENST00000403136 ALS2CLQ60I27 953 aa13.79□□□□□ -0.2
CEACAM1-206ENST00000403136 ARHGAP18Q8N392 663 aa13.79□□□□□ -0.2
CEACAM1-206ENST00000403136 BBOF1Q8ND07 529 aa13.79□□□□□ -0.2
CEACAM1-206ENST00000403136 STKLD1Q8NE28 680 aa13.79□□□□□ -0.2
CEACAM1-206ENST00000403136 GPR152Q8TDT2 470 aa13.79□□□□□ -0.2
CEACAM1-206ENST00000403136 RSAD2Q8WXG1 361 aa13.79□□□□□ -0.2
CEACAM1-206ENST00000403136 CLSTN3Q9BQT9 956 aa13.79□□□□□ -0.2
CEACAM1-206ENST00000403136 C10orf88Q9H8K7 445 aa13.79□□□□□ -0.2
CEACAM1-206ENST00000403136 ANLNQ9NQW6 1124 aa13.79□□□□□ -0.2
CEACAM1-206ENST00000403136 COMMD8Q9NX08 183 aa13.79□□□□□ -0.2
CEACAM1-206ENST00000403136 ANAPC5Q9UJX4 755 aa13.79□□□□□ -0.2
CEACAM1-206ENST00000403136 HEY1Q9Y5J3 304 aa13.79□□□□□ -0.2
CEACAM1-206ENST00000403136 H3BRJ5 948 aa13.78□□□□□ -0.2
CEACAM1-206ENST00000403136 I6L893 689 aaPredicted RBP13.78□□□□□ -0.2
CEACAM1-206ENST00000403136 C2CD2LO14523 706 aa13.78□□□□□ -0.2
CEACAM1-206ENST00000403136 IFNB1P01574 187 aa13.78□□□□□ -0.2
CEACAM1-206ENST00000403136 NR2C2P49116 596 aa13.78□□□□□ -0.2
CEACAM1-206ENST00000403136 CAV1Q03135 178 aa13.78□□□□□ -0.2
CEACAM1-206ENST00000403136 GPS2Q13227 327 aa13.78□□□□□ -0.2
CEACAM1-206ENST00000403136 DARS2Q6PI48 645 aaKnown RBP13.78□□□□□ -0.2
CEACAM1-206ENST00000403136 DDX53Q86TM3 631 aaKnown RBP13.78□□□□□ -0.2
CEACAM1-206ENST00000403136 ZC3H18Q86VM9 953 aaKnown RBP13.78□□□□□ -0.2
CEACAM1-206ENST00000403136 UNC45BQ8IWX7 931 aa13.78□□□□□ -0.2
CEACAM1-206ENST00000403136 IQCKQ8N0W5 287 aa13.78□□□□□ -0.2
CEACAM1-206ENST00000403136 KRT222Q8N1A0 295 aa13.78□□□□□ -0.2
CEACAM1-206ENST00000403136 RNF139Q8WU17 664 aa13.78□□□□□ -0.2
CEACAM1-206ENST00000403136 BADQ92934 168 aa13.78□□□□□ -0.2
CEACAM1-206ENST00000403136 RNF34Q969K3 372 aa13.78□□□□□ -0.2
CEACAM1-206ENST00000403136 TXLNGYQ9BZA5 131 aa13.78□□□□□ -0.2
CEACAM1-206ENST00000403136 TKTL2Q9H0I9 626 aa13.78□□□□□ -0.2
CEACAM1-206ENST00000403136 PCDH9Q9HC56 1237 aa13.78□□□□□ -0.2
CEACAM1-206ENST00000403136 OSER1Q9NX31 292 aa13.78□□□□□ -0.2
CEACAM1-206ENST00000403136 COL4A6Q14031 1691 aa13.78□□□□□ -0.2
CEACAM1-206ENST00000403136 ZBBXA8MT70 800 aa13.78□□□□□ -0.2
CEACAM1-206ENST00000403136 H7C0C1 242 aa13.78□□□□□ -0.2
CEACAM1-206ENST00000403136 CREB3O43889 395 aa13.78□□□□□ -0.2
CEACAM1-206ENST00000403136 PPFIA2O75334 1257 aa13.78□□□□□ -0.2
CEACAM1-206ENST00000403136 ATP5OP48047 213 aa13.78□□□□□ -0.2
CEACAM1-206ENST00000403136 HCAR3P49019 387 aa13.78□□□□□ -0.2
CEACAM1-206ENST00000403136 TUFMP49411 452 aaKnown RBP13.78□□□□□ -0.2
CEACAM1-206ENST00000403136 GLUD2P49448 558 aa13.78□□□□□ -0.2
CEACAM1-206ENST00000403136 ITGA8P53708 1063 aa13.78□□□□□ -0.2
CEACAM1-206ENST00000403136 FPGSQ05932 587 aa13.78□□□□□ -0.2
CEACAM1-206ENST00000403136 SLC10A2Q12908 348 aaPredicted RBP13.78□□□□□ -0.2
CEACAM1-206ENST00000403136 CFAP58Q5T655 872 aa13.78□□□□□ -0.2
CEACAM1-206ENST00000403136 RHBDF2Q6PJF5 856 aa13.78□□□□□ -0.2
CEACAM1-206ENST00000403136 TMC3Q7Z5M5 1100 aa13.78□□□□□ -0.2
CEACAM1-206ENST00000403136 CASP10Q92851 521 aa13.78□□□□□ -0.2
CEACAM1-206ENST00000403136 FBXO32Q969P5 355 aa13.78□□□□□ -0.2
CEACAM1-206ENST00000403136 HERC2P3Q9BVR0 1158 aa13.78□□□□□ -0.2
CEACAM1-206ENST00000403136 SMOC2Q9H3U7 446 aa13.78□□□□□ -0.2
CEACAM1-206ENST00000403136 PRDM10Q9NQV6 1147 aa13.78□□□□□ -0.2
CEACAM1-206ENST00000403136 ARHGEF4Q9NR80 690 aa13.78□□□□□ -0.2
CEACAM1-206ENST00000403136 ETNK2Q9NVF9 386 aa13.78□□□□□ -0.2
CEACAM1-206ENST00000403136 TMEM51Q9NW97 253 aa13.78□□□□□ -0.2
CEACAM1-206ENST00000403136 GMIPQ9P107 970 aa13.78□□□□□ -0.2
CEACAM1-206ENST00000403136 AFF4Q9UHB7 1163 aaKnown RBP13.78□□□□□ -0.2
CEACAM1-206ENST00000403136 SFMBT1Q9UHJ3 866 aa13.78□□□□□ -0.2
CEACAM1-206ENST00000403136 LTBP2Q14767 1821 aa13.78□□□□□ -0.2
CEACAM1-206ENST00000403136 GOLGA6BA6NDN3 693 aa13.77□□□□□ -0.21
CEACAM1-206ENST00000403136 FAM72CH0Y354 149 aa13.77□□□□□ -0.21
CEACAM1-206ENST00000403136 EEF2KO00418 725 aaKnown RBP13.77□□□□□ -0.21
CEACAM1-206ENST00000403136 IRAK2O43187 625 aa13.77□□□□□ -0.21
CEACAM1-206ENST00000403136 ABLIM3O94929 683 aa13.77□□□□□ -0.21
CEACAM1-206ENST00000403136 GJB5O95377 273 aa13.77□□□□□ -0.21
CEACAM1-206ENST00000403136 HSD17B3P37058 310 aa13.77□□□□□ -0.21
CEACAM1-206ENST00000403136 GDF10P55107 478 aa13.77□□□□□ -0.21
CEACAM1-206ENST00000403136 GBE1Q04446 702 aa13.77□□□□□ -0.21
CEACAM1-206ENST00000403136 TAF10Q12962 218 aa13.77□□□□□ -0.21
CEACAM1-206ENST00000403136 GPS1Q13098 491 aa13.77□□□□□ -0.21
CEACAM1-206ENST00000403136 SEMA3BQ13214 749 aa13.77□□□□□ -0.21
CEACAM1-206ENST00000403136 P3H1Q32P28 736 aa13.77□□□□□ -0.21
CEACAM1-206ENST00000403136 FAM72AQ5TYM5 149 aa13.77□□□□□ -0.21
CEACAM1-206ENST00000403136 IZUMO3Q5VZ72 239 aa13.77□□□□□ -0.21
CEACAM1-206ENST00000403136 NCBP2-AS2Q69YL0 99 aa13.77□□□□□ -0.21
CEACAM1-206ENST00000403136 FAM72DQ6L9T8 149 aa13.77□□□□□ -0.21
CEACAM1-206ENST00000403136 FAM72BQ86X60 149 aa13.77□□□□□ -0.21
CEACAM1-206ENST00000403136 FAM71DQ8N9W8 422 aa13.77□□□□□ -0.21
CEACAM1-206ENST00000403136 ZNF461Q8TAF7 563 aa13.77□□□□□ -0.21
CEACAM1-206ENST00000403136 GIPC2Q8TF65 315 aa13.77□□□□□ -0.21
CEACAM1-206ENST00000403136 ZBTB9Q96C00 473 aa13.77□□□□□ -0.21
CEACAM1-206ENST00000403136 CEP295NLQ96MC4 621 aa13.77□□□□□ -0.21
CEACAM1-206ENST00000403136 ADAM7Q9H2U9 754 aa13.77□□□□□ -0.21
CEACAM1-206ENST00000403136 USP29Q9HBJ7 922 aa13.77□□□□□ -0.21
CEACAM1-206ENST00000403136 AAASQ9NRG9 546 aa13.77□□□□□ -0.21
CEACAM1-206ENST00000403136 CLIC5Q9NZA1 410 aa13.77□□□□□ -0.21
CEACAM1-206ENST00000403136 NUDT5Q9UKK9 219 aa13.77□□□□□ -0.21
CEACAM1-206ENST00000403136 ATP8A1Q9Y2Q0 1164 aa13.77□□□□□ -0.21
CEACAM1-206ENST00000403136 MKI67P46013 3256 aaKnown RBP13.77□□□□□ -0.21
CEACAM1-206ENST00000403136 BCLAF3A2AJT9 711 aaKnown RBP13.76□□□□□ -0.21
CEACAM1-206ENST00000403136 SLC38A8A6NNN8 435 aa13.76□□□□□ -0.21
CEACAM1-206ENST00000403136 AGPSO00116 658 aa13.76□□□□□ -0.21
CEACAM1-206ENST00000403136 DNALI1O14645 258 aaPredicted RBP13.76□□□□□ -0.21
CEACAM1-206ENST00000403136 RPL22P35268 128 aaKnown RBP13.76□□□□□ -0.21
CEACAM1-206ENST00000403136 PSEN1P49768 467 aa13.76□□□□□ -0.21
CEACAM1-206ENST00000403136 ZNF135P52742 658 aaPredicted RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms