RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 SLC9A7Q96T83 725 aa8.96□□□□□ -0.97
TDP1-203ENST00000393454 ZBED2Q9BTP6 218 aa8.96□□□□□ -0.97
TDP1-203ENST00000393454 CRISPLD1Q9H336 500 aa8.96□□□□□ -0.97
TDP1-203ENST00000393454 NMUR1Q9HB89 426 aa8.96□□□□□ -0.97
TDP1-203ENST00000393454 WDR6Q9NNW5 1121 aaKnown RBP8.96□□□□□ -0.97
TDP1-203ENST00000393454 MTRRQ9UBK8 725 aa8.96□□□□□ -0.97
TDP1-203ENST00000393454 SFMBT1Q9UHJ3 866 aa8.96□□□□□ -0.97
TDP1-203ENST00000393454 FBXW11Q9UKB1 542 aa8.96□□□□□ -0.97
TDP1-203ENST00000393454 NUDT5Q9UKK9 219 aa8.96□□□□□ -0.97
TDP1-203ENST00000393454 SCML2Q9UQR0 700 aa8.96□□□□□ -0.97
TDP1-203ENST00000393454 WDR27A2RRH5 827 aa8.96□□□□□ -0.98
TDP1-203ENST00000393454 GOLGA6BA6NDN3 693 aa8.96□□□□□ -0.98
TDP1-203ENST00000393454 ZNF487B1APH4 448 aa8.96□□□□□ -0.98
TDP1-203ENST00000393454 RTN3O95197 1032 aaPredicted RBP8.96□□□□□ -0.98
TDP1-203ENST00000393454 VNN2O95498 520 aa8.96□□□□□ -0.98
TDP1-203ENST00000393454 DNAJB2P25686 324 aa8.96□□□□□ -0.98
TDP1-203ENST00000393454 KLRC2P26717 231 aa8.96□□□□□ -0.98
TDP1-203ENST00000393454 GLUD2P49448 558 aa8.96□□□□□ -0.98
TDP1-203ENST00000393454 CXCR3P49682 368 aa8.96□□□□□ -0.98
TDP1-203ENST00000393454 AIF1P55008 147 aa8.96□□□□□ -0.98
TDP1-203ENST00000393454 FPGSQ05932 587 aa8.96□□□□□ -0.98
TDP1-203ENST00000393454 NOMO1Q15155 1222 aa8.96□□□□□ -0.98
TDP1-203ENST00000393454 HSP90B2PQ58FF3 399 aa8.96□□□□□ -0.98
TDP1-203ENST00000393454 IZUMO3Q5VZ72 239 aa8.96□□□□□ -0.98
TDP1-203ENST00000393454 C16orf59Q7L2K0 433 aa8.96□□□□□ -0.98
TDP1-203ENST00000393454 ARHGAP18Q8N392 663 aa8.96□□□□□ -0.98
TDP1-203ENST00000393454 FAM71DQ8N9W8 422 aa8.96□□□□□ -0.98
TDP1-203ENST00000393454 GLIS1Q8NBF1 620 aa8.96□□□□□ -0.98
TDP1-203ENST00000393454 BBOF1Q8ND07 529 aa8.96□□□□□ -0.98
TDP1-203ENST00000393454 NTAN1Q96AB6 310 aa8.96□□□□□ -0.98
TDP1-203ENST00000393454 PGAP3Q96FM1 320 aaPredicted RBP8.96□□□□□ -0.98
TDP1-203ENST00000393454 TKTL2Q9H0I9 626 aa8.96□□□□□ -0.98
TDP1-203ENST00000393454 AAASQ9NRG9 546 aa8.96□□□□□ -0.98
TDP1-203ENST00000393454 GMIPQ9P107 970 aa8.96□□□□□ -0.98
TDP1-203ENST00000393454 MAGED2Q9UNF1 606 aaPredicted RBP8.96□□□□□ -0.98
TDP1-203ENST00000393454 ATP8A1Q9Y2Q0 1164 aa8.96□□□□□ -0.98
TDP1-203ENST00000393454 NEU2Q9Y3R4 380 aa8.96□□□□□ -0.98
TDP1-203ENST00000393454 BACE2Q9Y5Z0 518 aa8.96□□□□□ -0.98
TDP1-203ENST00000393454 COL4A6Q14031 1691 aa8.96□□□□□ -0.98
TDP1-203ENST00000393454 ZNF638Q14966 1978 aaKnown RBP8.95□□□□□ -0.98
TDP1-203ENST00000393454 MSI1O43347 362 aaKnown RBP8.95□□□□□ -0.98
TDP1-203ENST00000393454 EFEMP2O95967 443 aa8.95□□□□□ -0.98
TDP1-203ENST00000393454 URODP06132 367 aa8.95□□□□□ -0.98
TDP1-203ENST00000393454 IVDP26440 423 aa8.95□□□□□ -0.98
TDP1-203ENST00000393454 HSPA9P38646 679 aaKnown RBP8.95□□□□□ -0.98
TDP1-203ENST00000393454 MTMR3Q13615 1198 aa8.95□□□□□ -0.98
TDP1-203ENST00000393454 SLC8B1Q6J4K2 584 aa8.95□□□□□ -0.98
TDP1-203ENST00000393454 BEND5Q7L4P6 421 aa8.95□□□□□ -0.98
TDP1-203ENST00000393454 UNC45BQ8IWX7 931 aa8.95□□□□□ -0.98
TDP1-203ENST00000393454 C7orf61Q8IZ16 206 aa8.95□□□□□ -0.98
TDP1-203ENST00000393454 VPS52Q8N1B4 723 aa8.95□□□□□ -0.98
TDP1-203ENST00000393454 MREGQ8N565 214 aa8.95□□□□□ -0.98
TDP1-203ENST00000393454 CCDC33Q8N5R6 958 aa8.95□□□□□ -0.98
TDP1-203ENST00000393454 CASP10Q92851 521 aa8.95□□□□□ -0.98
TDP1-203ENST00000393454 HERC2P3Q9BVR0 1158 aa8.95□□□□□ -0.98
TDP1-203ENST00000393454 RC3H2Q9HBD1 1191 aaKnown RBP8.95□□□□□ -0.98
TDP1-203ENST00000393454 ANLNQ9NQW6 1124 aa8.95□□□□□ -0.98
TDP1-203ENST00000393454 RCOR3Q9P2K3 495 aaPredicted RBP8.95□□□□□ -0.98
TDP1-203ENST00000393454 PCDHB12Q9Y5F1 795 aa8.95□□□□□ -0.98
TDP1-203ENST00000393454 SNX10Q9Y5X0 201 aa8.95□□□□□ -0.98
TDP1-203ENST00000393454 CARNS1A5YM72 827 aa8.95□□□□□ -0.98
TDP1-203ENST00000393454 SLC38A8A6NNN8 435 aa8.95□□□□□ -0.98
TDP1-203ENST00000393454 FAM72CH0Y354 149 aa8.95□□□□□ -0.98
TDP1-203ENST00000393454 KCNN4O15554 427 aa8.95□□□□□ -0.98
TDP1-203ENST00000393454 HSD17B3P37058 310 aa8.95□□□□□ -0.98
TDP1-203ENST00000393454 GGCXP38435 758 aa8.95□□□□□ -0.98
TDP1-203ENST00000393454 TUFMP49411 452 aaKnown RBP8.95□□□□□ -0.98
TDP1-203ENST00000393454 GDF10P55107 478 aa8.95□□□□□ -0.98
TDP1-203ENST00000393454 TPI1P60174 286 aa8.95□□□□□ -0.98
TDP1-203ENST00000393454 CBX1P83916 185 aa8.95□□□□□ -0.98
TDP1-203ENST00000393454 DSG1Q02413 1049 aa8.95□□□□□ -0.98
TDP1-203ENST00000393454 CAV1Q03135 178 aa8.95□□□□□ -0.98
TDP1-203ENST00000393454 GBE1Q04446 702 aa8.95□□□□□ -0.98
TDP1-203ENST00000393454 SCAPQ12770 1279 aa8.95□□□□□ -0.98
TDP1-203ENST00000393454 TAF10Q12962 218 aa8.95□□□□□ -0.98
TDP1-203ENST00000393454 FAM72AQ5TYM5 149 aa8.95□□□□□ -0.98
TDP1-203ENST00000393454 ALS2CLQ60I27 953 aa8.95□□□□□ -0.98
TDP1-203ENST00000393454 FAM72DQ6L9T8 149 aa8.95□□□□□ -0.98
TDP1-203ENST00000393454 RFX8Q6ZV50 586 aa8.95□□□□□ -0.98
TDP1-203ENST00000393454 TMC3Q7Z5M5 1100 aa8.95□□□□□ -0.98
TDP1-203ENST00000393454 DDX53Q86TM3 631 aaKnown RBP8.95□□□□□ -0.98
TDP1-203ENST00000393454 FAM72BQ86X60 149 aa8.95□□□□□ -0.98
TDP1-203ENST00000393454 RNF168Q8IYW5 571 aaPredicted RBP8.95□□□□□ -0.98
TDP1-203ENST00000393454 FIBCD1Q8N539 461 aa8.95□□□□□ -0.98
TDP1-203ENST00000393454 TAB3Q8N5C8 712 aaPredicted RBP8.95□□□□□ -0.98
TDP1-203ENST00000393454 LRRN4Q8WUT4 740 aa8.95□□□□□ -0.98
TDP1-203ENST00000393454 AUTS2Q8WXX7 1259 aa8.95□□□□□ -0.98
TDP1-203ENST00000393454 SPATA17Q96L03 361 aa8.95□□□□□ -0.98
TDP1-203ENST00000393454 CLSTN3Q9BQT9 956 aa8.95□□□□□ -0.98
TDP1-203ENST00000393454 FAM129AQ9BZQ8 928 aa8.95□□□□□ -0.98
TDP1-203ENST00000393454 SIK2Q9H0K1 926 aa8.95□□□□□ -0.98
TDP1-203ENST00000393454 SMOC2Q9H3U7 446 aa8.95□□□□□ -0.98
TDP1-203ENST00000393454 PCDH9Q9HC56 1237 aa8.95□□□□□ -0.98
TDP1-203ENST00000393454 ARHGEF4Q9NR80 690 aa8.95□□□□□ -0.98
TDP1-203ENST00000393454 ETNK2Q9NVF9 386 aa8.95□□□□□ -0.98
TDP1-203ENST00000393454 OSER1Q9NX31 292 aa8.95□□□□□ -0.98
TDP1-203ENST00000393454 FAM53CQ9NYF3 392 aa8.95□□□□□ -0.98
TDP1-203ENST00000393454 MFHAS1Q9Y4C4 1052 aa8.95□□□□□ -0.98
TDP1-203ENST00000393454 PTPRSQ13332 1948 aa8.94□□□□□ -0.98
TDP1-203ENST00000393454 DNALI1O14645 258 aaPredicted RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms