RNA–Protein interactions for RNA: ENST00000379937.6

BRF1-203, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-203ENST00000379937 OTOP3Q7RTS5 596 aa16.15■□□□□ 0.18
BRF1-203ENST00000379937 NDUFAF2Q8N183 169 aa16.15■□□□□ 0.18
BRF1-203ENST00000379937 ATAD1Q8NBU5 361 aa16.15■□□□□ 0.18
BRF1-203ENST00000379937 SLC35B2Q8TB61 432 aa16.15■□□□□ 0.18
BRF1-203ENST00000379937 VCPIP1Q96JH7 1222 aa16.15■□□□□ 0.18
BRF1-203ENST00000379937 ZNF778Q96MU6 729 aa16.15■□□□□ 0.18
BRF1-203ENST00000379937 DDX56Q9NY93 547 aaKnown RBP16.15■□□□□ 0.18
BRF1-203ENST00000379937 PADI3Q9ULW8 664 aa16.15■□□□□ 0.18
BRF1-203ENST00000379937 FAM237BA0A1B0GVD1 139 aa16.14■□□□□ 0.17
BRF1-203ENST00000379937 TCRBV5S1A1TA0A578 114 aa16.14■□□□□ 0.17
BRF1-203ENST00000379937 CCT8L1PA6NM43 557 aa16.14■□□□□ 0.17
BRF1-203ENST00000379937 APOC4-APOC2K7ER74 178 aa16.14■□□□□ 0.17
BRF1-203ENST00000379937 ZMPSTE24O75844 475 aa16.14■□□□□ 0.17
BRF1-203ENST00000379937 MT-CYBP00156 380 aaPredicted RBP16.14■□□□□ 0.17
BRF1-203ENST00000379937 APOC2P02655 101 aa16.14■□□□□ 0.17
BRF1-203ENST00000379937 DRG2P55039 364 aaKnown RBP16.14■□□□□ 0.17
BRF1-203ENST00000379937 KDSRQ06136 332 aa16.14■□□□□ 0.17
BRF1-203ENST00000379937 ZNF268Q14587 947 aaPredicted RBP16.14■□□□□ 0.17
BRF1-203ENST00000379937 KCNA10Q16322 511 aa16.14■□□□□ 0.17
BRF1-203ENST00000379937 LCLAT1Q6UWP7 414 aa16.14■□□□□ 0.17
BRF1-203ENST00000379937 BBS12Q6ZW61 710 aa16.14■□□□□ 0.17
BRF1-203ENST00000379937 LDB1Q86U70 411 aaPredicted RBP16.14■□□□□ 0.17
BRF1-203ENST00000379937 SNX31Q8N9S9 440 aa16.14■□□□□ 0.17
BRF1-203ENST00000379937 COLGALT1Q8NBJ5 622 aa16.14■□□□□ 0.17
BRF1-203ENST00000379937 DTX3LQ8TDB6 740 aa16.14■□□□□ 0.17
BRF1-203ENST00000379937 EXT2Q93063 718 aa16.14■□□□□ 0.17
BRF1-203ENST00000379937 CSPG4P5Q96PW8 444 aa16.14■□□□□ 0.17
BRF1-203ENST00000379937 RSAD1Q9HA92 442 aa16.14■□□□□ 0.17
BRF1-203ENST00000379937 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.14■□□□□ 0.17
BRF1-203ENST00000379937 UBQLN1Q9UMX0 589 aaKnown RBP16.14■□□□□ 0.17
BRF1-203ENST00000379937 PRKAR2AP13861 404 aaKnown RBP16.14■□□□□ 0.17
BRF1-203ENST00000379937 GRM5P41594 1212 aa16.14■□□□□ 0.17
BRF1-203ENST00000379937 RPL10AP62906 217 aaKnown RBP16.14■□□□□ 0.17
BRF1-203ENST00000379937 ZNF460Q14592 562 aa16.14■□□□□ 0.17
BRF1-203ENST00000379937 TRIM68Q6AZZ1 485 aa16.14■□□□□ 0.17
BRF1-203ENST00000379937 DEFB128Q7Z7B8 93 aa16.14■□□□□ 0.17
BRF1-203ENST00000379937 VPS52Q8N1B4 723 aa16.14■□□□□ 0.17
BRF1-203ENST00000379937 UBR7Q8N806 425 aa16.14■□□□□ 0.17
BRF1-203ENST00000379937 ATP11CQ8NB49 1132 aa16.14■□□□□ 0.17
BRF1-203ENST00000379937 CXorf38Q8TB03 319 aa16.14■□□□□ 0.17
BRF1-203ENST00000379937 TMLHEQ9NVH6 421 aa16.14■□□□□ 0.17
BRF1-203ENST00000379937 NRCAMQ92823 1304 aa16.14■□□□□ 0.17
BRF1-203ENST00000379937 LOC100653049A0A140TA62 436 aa16.14■□□□□ 0.17
BRF1-203ENST00000379937 ARL5CA6NH57 179 aa16.14■□□□□ 0.17
BRF1-203ENST00000379937 PMM2O15305 246 aa16.14■□□□□ 0.17
BRF1-203ENST00000379937 KRT34O76011 436 aa16.14■□□□□ 0.17
BRF1-203ENST00000379937 THP07101 528 aa16.14■□□□□ 0.17
BRF1-203ENST00000379937 CSH1P0DML2 217 aa16.14■□□□□ 0.17
BRF1-203ENST00000379937 CSH2P0DML3 217 aa16.14■□□□□ 0.17
BRF1-203ENST00000379937 CERCAMQ5T4B2 595 aa16.14■□□□□ 0.17
BRF1-203ENST00000379937 SLC35F5Q8WV83 523 aa16.14■□□□□ 0.17
BRF1-203ENST00000379937 SYT15Q9BQS2 421 aa16.14■□□□□ 0.17
BRF1-203ENST00000379937 PCDH9Q9HC56 1237 aa16.14■□□□□ 0.17
BRF1-203ENST00000379937 CRTAC1Q9NQ79 661 aa16.14■□□□□ 0.17
BRF1-203ENST00000379937 XPNPEP3Q9NQH7 507 aa16.14■□□□□ 0.17
BRF1-203ENST00000379937 FAM105AQ9NUU6 356 aa16.14■□□□□ 0.17
BRF1-203ENST00000379937 TXNDC16Q9P2K2 825 aa16.14■□□□□ 0.17
BRF1-203ENST00000379937 RLFQ13129 1914 aa16.13■□□□□ 0.17
BRF1-203ENST00000379937 RNF103O00237 685 aa16.13■□□□□ 0.17
BRF1-203ENST00000379937 ZNF865P0CJ78 1059 aaPredicted RBP16.13■□□□□ 0.17
BRF1-203ENST00000379937 YWHAZP63104 245 aaKnown RBP16.13■□□□□ 0.17
BRF1-203ENST00000379937 MXRA7P84157 204 aa16.13■□□□□ 0.17
BRF1-203ENST00000379937 COL9A2Q14055 689 aaPredicted RBP16.13■□□□□ 0.17
BRF1-203ENST00000379937 POU6F1Q14863 301 aa16.13■□□□□ 0.17
BRF1-203ENST00000379937 ZNF280DQ6N043 979 aa16.13■□□□□ 0.17
BRF1-203ENST00000379937 ZNF280BQ86YH2 543 aa16.13■□□□□ 0.17
BRF1-203ENST00000379937 TKTL2Q9H0I9 626 aa16.13■□□□□ 0.17
BRF1-203ENST00000379937 STMN4Q9H169 189 aaPredicted RBP16.13■□□□□ 0.17
BRF1-203ENST00000379937 MAN1C1Q9NR34 630 aa16.13■□□□□ 0.17
BRF1-203ENST00000379937 DTLQ9NZJ0 730 aa16.13■□□□□ 0.17
BRF1-203ENST00000379937 RABGEF1Q9UJ41 708 aa16.13■□□□□ 0.17
BRF1-203ENST00000379937 PCDHGC3Q9UN70 934 aa16.13■□□□□ 0.17
BRF1-203ENST00000379937 USP15Q9Y4E8 981 aaPredicted RBP16.13■□□□□ 0.17
BRF1-203ENST00000379937 EEF2KO00418 725 aaKnown RBP16.13■□□□□ 0.17
BRF1-203ENST00000379937 SNX3O60493 162 aa16.13■□□□□ 0.17
BRF1-203ENST00000379937 GJB3O75712 270 aa16.13■□□□□ 0.17
BRF1-203ENST00000379937 SUN1O94901 812 aa16.13■□□□□ 0.17
BRF1-203ENST00000379937 GEMIN4P57678 1058 aaKnown RBP16.13■□□□□ 0.17
BRF1-203ENST00000379937 MGAT5Q09328 741 aa16.13■□□□□ 0.17
BRF1-203ENST00000379937 IQSEC1Q6DN90 963 aa16.13■□□□□ 0.17
BRF1-203ENST00000379937 TRABD2AQ86V40 505 aa16.13■□□□□ 0.17
BRF1-203ENST00000379937 ARID3BQ8IVW6 561 aaPredicted RBP16.13■□□□□ 0.17
BRF1-203ENST00000379937 IPMKQ8NFU5 416 aa16.13■□□□□ 0.17
BRF1-203ENST00000379937 AGAP2Q99490 1192 aa16.13■□□□□ 0.17
BRF1-203ENST00000379937 PPP1R12CQ9BZL4 782 aa16.13■□□□□ 0.17
BRF1-203ENST00000379937 CNOT10Q9H9A5 744 aaKnown RBP16.13■□□□□ 0.17
BRF1-203ENST00000379937 PRM3Q9NNZ6 103 aa16.13■□□□□ 0.17
BRF1-203ENST00000379937 ACTL7AQ9Y615 435 aa16.13■□□□□ 0.17
BRF1-203ENST00000379937 KIF13BQ9NQT8 1826 aa16.13■□□□□ 0.17
BRF1-203ENST00000379937 I6L893 689 aaPredicted RBP16.12■□□□□ 0.17
BRF1-203ENST00000379937 FAM200BP0CF97 657 aa16.12■□□□□ 0.17
BRF1-203ENST00000379937 VAV1P15498 845 aa16.12■□□□□ 0.17
BRF1-203ENST00000379937 TAC1P20366 129 aa16.12■□□□□ 0.17
BRF1-203ENST00000379937 RDXP35241 583 aaKnown RBP16.12■□□□□ 0.17
BRF1-203ENST00000379937 CCR10P46092 362 aa16.12■□□□□ 0.17
BRF1-203ENST00000379937 CCL23P55773 120 aa16.12■□□□□ 0.17
BRF1-203ENST00000379937 LMNB2Q03252 620 aa16.12■□□□□ 0.17
BRF1-203ENST00000379937 RPS27LQ71UM5 84 aaKnown RBP16.12■□□□□ 0.17
BRF1-203ENST00000379937 POU5F2Q8N7G0 328 aa16.12■□□□□ 0.17
BRF1-203ENST00000379937 ZC3H15Q8WU90 426 aaKnown RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms