RNA–Protein interactions for RNA: ENST00000359526.8

DNMT1-202, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene DNMT1, Length 5,206 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-202ENST00000359526 RWDD3Q9Y3V2 267 aa12.55□□□□□ -0.4
DNMT1-202ENST00000359526 THPOP40225 353 aa12.55□□□□□ -0.4
DNMT1-202ENST00000359526 PRKCIP41743 596 aa12.55□□□□□ -0.4
DNMT1-202ENST00000359526 SLC11A2P49281 568 aa12.55□□□□□ -0.4
DNMT1-202ENST00000359526 MFSD10Q14728 455 aa12.55□□□□□ -0.4
DNMT1-202ENST00000359526 ZRANB3Q5FWF4 1079 aa12.55□□□□□ -0.4
DNMT1-202ENST00000359526 TMEM86AQ8N2M4 240 aa12.55□□□□□ -0.4
DNMT1-202ENST00000359526 TDRD5Q8NAT2 981 aaKnown RBP12.55□□□□□ -0.4
DNMT1-202ENST00000359526 KYQ8NBH2 561 aa12.55□□□□□ -0.4
DNMT1-202ENST00000359526 NINJ2Q9NZG7 142 aa12.55□□□□□ -0.4
DNMT1-202ENST00000359526 BTBD7Q9P203 1132 aa12.55□□□□□ -0.4
DNMT1-202ENST00000359526 AP4E1Q9UPM8 1137 aa12.55□□□□□ -0.4
DNMT1-202ENST00000359526 TULP2O00295 520 aa12.55□□□□□ -0.4
DNMT1-202ENST00000359526 STX7O15400 261 aaKnown RBP12.55□□□□□ -0.4
DNMT1-202ENST00000359526 HIST2H2ACQ16777 129 aaPredicted RBP12.55□□□□□ -0.4
DNMT1-202ENST00000359526 TJAP1Q5JTD0 557 aa12.55□□□□□ -0.4
DNMT1-202ENST00000359526 HIST2H2AA3Q6FI13 130 aa12.55□□□□□ -0.4
DNMT1-202ENST00000359526 ZFP1Q6P2D0 407 aa12.55□□□□□ -0.4
DNMT1-202ENST00000359526 STRA8Q7Z7C7 330 aa12.55□□□□□ -0.4
DNMT1-202ENST00000359526 CHSY1Q86X52 802 aa12.55□□□□□ -0.4
DNMT1-202ENST00000359526 SLC35C1Q96A29 364 aa12.55□□□□□ -0.4
DNMT1-202ENST00000359526 CINPQ9BW66 212 aaPredicted RBP12.55□□□□□ -0.4
DNMT1-202ENST00000359526 NDEL1Q9GZM8 345 aa12.55□□□□□ -0.4
DNMT1-202ENST00000359526 GPRC5CQ9NQ84 441 aa12.55□□□□□ -0.4
DNMT1-202ENST00000359526 LRRC4BQ9NT99 713 aa12.55□□□□□ -0.4
DNMT1-202ENST00000359526 ITGB1BP2Q9UKP3 347 aa12.55□□□□□ -0.4
DNMT1-202ENST00000359526 RNF112Q9ULX5 631 aa12.55□□□□□ -0.4
DNMT1-202ENST00000359526 ACTL7BQ9Y614 415 aa12.55□□□□□ -0.4
DNMT1-202ENST00000359526 NRCAMQ92823 1304 aa12.54□□□□□ -0.4
DNMT1-202ENST00000359526 ARIH2O95376 493 aa12.54□□□□□ -0.4
DNMT1-202ENST00000359526 PGK2P07205 417 aa12.54□□□□□ -0.4
DNMT1-202ENST00000359526 KLRK1P26718 216 aa12.54□□□□□ -0.4
DNMT1-202ENST00000359526 PSEN2P49810 448 aa12.54□□□□□ -0.4
DNMT1-202ENST00000359526 PRKAA1Q13131 559 aa12.54□□□□□ -0.4
DNMT1-202ENST00000359526 CCDC103Q8IW40 242 aa12.54□□□□□ -0.4
DNMT1-202ENST00000359526 SPATA16Q9BXB7 569 aa12.54□□□□□ -0.4
DNMT1-202ENST00000359526 SHCBP1LQ9BZQ2 653 aa12.54□□□□□ -0.4
DNMT1-202ENST00000359526 TRDMT1O14717 391 aaKnown RBP12.54□□□□□ -0.4
DNMT1-202ENST00000359526 MAP3K13O43283 966 aa12.54□□□□□ -0.4
DNMT1-202ENST00000359526 CDK7P50613 346 aa12.54□□□□□ -0.4
DNMT1-202ENST00000359526 RTP1P59025 263 aa12.54□□□□□ -0.4
DNMT1-202ENST00000359526 PTPN11Q06124 597 aaPredicted RBP12.54□□□□□ -0.4
DNMT1-202ENST00000359526 MAP2K5Q13163 448 aa12.54□□□□□ -0.4
DNMT1-202ENST00000359526 MPP3Q13368 585 aa12.54□□□□□ -0.4
DNMT1-202ENST00000359526 MTM1Q13496 603 aa12.54□□□□□ -0.4
DNMT1-202ENST00000359526 KCNT1Q5JUK3 1230 aa12.54□□□□□ -0.4
DNMT1-202ENST00000359526 ACTL9Q8TC94 416 aa12.54□□□□□ -0.4
DNMT1-202ENST00000359526 TADA1Q96BN2 335 aa12.54□□□□□ -0.4
DNMT1-202ENST00000359526 ZFRQ96KR1 1074 aaKnown RBP12.54□□□□□ -0.4
DNMT1-202ENST00000359526 IARS2Q9NSE4 1012 aaKnown RBP12.54□□□□□ -0.4
DNMT1-202ENST00000359526 ANKRD6Q9Y2G4 727 aa12.54□□□□□ -0.4
DNMT1-202ENST00000359526 SNX13Q9Y5W8 968 aa12.54□□□□□ -0.4
DNMT1-202ENST00000359526 COPG1Q9Y678 874 aaKnown RBP12.54□□□□□ -0.4
DNMT1-202ENST00000359526 CYP3A7-CYP3A51PA0A087WV96 503 aa12.54□□□□□ -0.4
DNMT1-202ENST00000359526 PECAM1P16284 738 aaPredicted RBP12.54□□□□□ -0.4
DNMT1-202ENST00000359526 CYP3A7P24462 503 aa12.54□□□□□ -0.4
DNMT1-202ENST00000359526 DNAJB2P25686 324 aa12.54□□□□□ -0.4
DNMT1-202ENST00000359526 NFIAQ12857 509 aa12.54□□□□□ -0.4
DNMT1-202ENST00000359526 ACVR2BQ13705 512 aa12.54□□□□□ -0.4
DNMT1-202ENST00000359526 TMEM199Q8N511 208 aa12.54□□□□□ -0.4
DNMT1-202ENST00000359526 OXNAD1Q96HP4 312 aaPredicted RBP12.54□□□□□ -0.4
DNMT1-202ENST00000359526 MPP4Q96JB8 637 aa12.54□□□□□ -0.4
DNMT1-202ENST00000359526 KCTD10Q9H3F6 313 aa12.54□□□□□ -0.4
DNMT1-202ENST00000359526 FRMPD4Q14CM0 1322 aa12.54□□□□□ -0.4
DNMT1-202ENST00000359526 SHPRHQ149N8 1683 aa12.54□□□□□ -0.4
DNMT1-202ENST00000359526 SNTNA6NMZ2 147 aa12.54□□□□□ -0.4
DNMT1-202ENST00000359526 DDX3XO00571 662 aaKnown RBP eCLIP12.54□□□□□ -0.48e-9■■□□□ 12.4
DNMT1-202ENST00000359526 FAM58BPP0C7Q3 252 aa12.54□□□□□ -0.4
DNMT1-202ENST00000359526 TFE3P19532 575 aaPredicted RBP12.54□□□□□ -0.4
DNMT1-202ENST00000359526 ATP4AP20648 1035 aa12.54□□□□□ -0.4
DNMT1-202ENST00000359526 NR2C2P49116 596 aa12.54□□□□□ -0.4
DNMT1-202ENST00000359526 TBL3Q12788 808 aaKnown RBP12.54□□□□□ -0.4
DNMT1-202ENST00000359526 SMARCB1Q12824 385 aa12.54□□□□□ -0.4
DNMT1-202ENST00000359526 IYDQ6PHW0 289 aa12.54□□□□□ -0.4
DNMT1-202ENST00000359526 ACER1Q8TDN7 264 aa12.54□□□□□ -0.4
DNMT1-202ENST00000359526 THUMPD3Q9BV44 507 aaKnown RBP12.54□□□□□ -0.4
DNMT1-202ENST00000359526 WWOXQ9NZC7 414 aa12.54□□□□□ -0.4
DNMT1-202ENST00000359526 PMPCBO75439 489 aa12.53□□□□□ -0.4
DNMT1-202ENST00000359526 WBP4O75554 376 aaKnown RBP12.53□□□□□ -0.4
DNMT1-202ENST00000359526 DLGAP3O95886 979 aa12.53□□□□□ -0.4
DNMT1-202ENST00000359526 FAM153BP0C7A2 387 aa12.53□□□□□ -0.4
DNMT1-202ENST00000359526 ZNF23P17027 643 aa12.53□□□□□ -0.4
DNMT1-202ENST00000359526 EPHB3P54753 998 aa12.53□□□□□ -0.4
DNMT1-202ENST00000359526 DMPKQ09013 629 aa12.53□□□□□ -0.4
DNMT1-202ENST00000359526 FAM153CQ494X1 144 aa12.53□□□□□ -0.4
DNMT1-202ENST00000359526 SNX30Q5VWJ9 437 aa12.53□□□□□ -0.4
DNMT1-202ENST00000359526 ZCCHC9Q8N567 271 aaKnown RBP12.53□□□□□ -0.4
DNMT1-202ENST00000359526 PHF21AQ96BD5 680 aa12.53□□□□□ -0.4
DNMT1-202ENST00000359526 XPNPEP3Q9NQH7 507 aa12.53□□□□□ -0.4
DNMT1-202ENST00000359526 CHST12Q9NRB3 414 aa12.53□□□□□ -0.4
DNMT1-202ENST00000359526 TBC1D13Q9NVG8 400 aa12.53□□□□□ -0.4
DNMT1-202ENST00000359526 SIK3Q9Y2K2 1263 aa12.53□□□□□ -0.4
DNMT1-202ENST00000359526 RTN3O95197 1032 aaPredicted RBP12.53□□□□□ -0.4
DNMT1-202ENST00000359526 GSNP06396 782 aa12.53□□□□□ -0.4
DNMT1-202ENST00000359526 FGRP09769 529 aa12.53□□□□□ -0.4
DNMT1-202ENST00000359526 RARAP10276 462 aa12.53□□□□□ -0.4
DNMT1-202ENST00000359526 SP3Q02447 781 aa12.53□□□□□ -0.4
DNMT1-202ENST00000359526 TWF1Q12792 350 aa12.53□□□□□ -0.4
DNMT1-202ENST00000359526 IRGCQ6NXR0 463 aa12.53□□□□□ -0.4
DNMT1-202ENST00000359526 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms