RNA–Protein interactions for RNA: ENST00000352260.11

SPNS1-204, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 1 (best) BASIC

Gene SPNS1, Length 1,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-204ENST00000352260 TNIP3Q96KP6 325 aa19.31■□□□□ 0.68
SPNS1-204ENST00000352260 NR1H4Q96RI1 486 aaPredicted RBP19.31■□□□□ 0.68
SPNS1-204ENST00000352260 PEBP4Q96S96 227 aa19.31■□□□□ 0.68
SPNS1-204ENST00000352260 DENND2DQ9H6A0 471 aaPredicted RBP19.31■□□□□ 0.68
SPNS1-204ENST00000352260 USP18Q9UMW8 372 aa19.31■□□□□ 0.68
SPNS1-204ENST00000352260 NAALADL1Q9UQQ1 740 aa19.31■□□□□ 0.68
SPNS1-204ENST00000352260 C2CD2LO14523 706 aa19.31■□□□□ 0.68
SPNS1-204ENST00000352260 CABYRO75952 493 aa19.31■□□□□ 0.68
SPNS1-204ENST00000352260 FAM163BP0C2L3 166 aa19.31■□□□□ 0.68
SPNS1-204ENST00000352260 RPL34P49207 117 aaKnown RBP19.31■□□□□ 0.68
SPNS1-204ENST00000352260 SCNN1GP51170 649 aa19.31■□□□□ 0.68
SPNS1-204ENST00000352260 ACLYP53396 1101 aa19.31■□□□□ 0.68
SPNS1-204ENST00000352260 SNX16P57768 344 aa19.31■□□□□ 0.68
SPNS1-204ENST00000352260 CCDC14Q49A88 953 aa19.31■□□□□ 0.68
SPNS1-204ENST00000352260 RAB6CQ53S08 254 aa19.31■□□□□ 0.68
SPNS1-204ENST00000352260 FAM26DQ5JW98 314 aa19.31■□□□□ 0.68
SPNS1-204ENST00000352260 WSCD1Q658N2 575 aa19.31■□□□□ 0.68
SPNS1-204ENST00000352260 DRICH1Q6PGQ1 229 aaPredicted RBP19.31■□□□□ 0.68
SPNS1-204ENST00000352260 C4orf50Q6ZRC1 276 aa19.31■□□□□ 0.68
SPNS1-204ENST00000352260 SCUBE3Q8IX30 993 aa19.31■□□□□ 0.68
SPNS1-204ENST00000352260 B3GALNT2Q8NCR0 500 aa19.31■□□□□ 0.68
SPNS1-204ENST00000352260 C10orf82Q8WW14 230 aa19.31■□□□□ 0.68
SPNS1-204ENST00000352260 B3GNT5Q9BYG0 378 aa19.31■□□□□ 0.68
SPNS1-204ENST00000352260 RAB6CQ9H0N0 254 aa19.31■□□□□ 0.68
SPNS1-204ENST00000352260 MMADHCQ9H3L0 296 aaPredicted RBP19.31■□□□□ 0.68
SPNS1-204ENST00000352260 NINJ2Q9NZG7 142 aa19.31■□□□□ 0.68
SPNS1-204ENST00000352260 DNPEPQ9ULA0 475 aa19.31■□□□□ 0.68
SPNS1-204ENST00000352260 EFR3BQ9Y2G0 817 aa19.31■□□□□ 0.68
SPNS1-204ENST00000352260 TKTP29401 623 aaKnown RBP19.3■□□□□ 0.68
SPNS1-204ENST00000352260 ZDHHC17Q8IUH5 632 aa19.3■□□□□ 0.68
SPNS1-204ENST00000352260 CMASQ8NFW8 434 aaPredicted RBP19.3■□□□□ 0.68
SPNS1-204ENST00000352260 RAET1EQ8TD07 263 aa19.3■□□□□ 0.68
SPNS1-204ENST00000352260 DENND1AQ8TEH3 1009 aa19.3■□□□□ 0.68
SPNS1-204ENST00000352260 NOD1Q9Y239 953 aa19.3■□□□□ 0.68
SPNS1-204ENST00000352260 GABRDO14764 452 aa19.29■□□□□ 0.68
SPNS1-204ENST00000352260 ZNF623O75123 536 aa19.29■□□□□ 0.68
SPNS1-204ENST00000352260 CD48P09326 243 aa19.29■□□□□ 0.68
SPNS1-204ENST00000352260 ATF2P15336 505 aa19.29■□□□□ 0.68
SPNS1-204ENST00000352260 RASA2Q15283 850 aa19.29■□□□□ 0.68
SPNS1-204ENST00000352260 CCDC6Q16204 474 aa19.29■□□□□ 0.68
SPNS1-204ENST00000352260 CYP4V2Q6ZWL3 525 aaPredicted RBP19.29■□□□□ 0.68
SPNS1-204ENST00000352260 ZNF365Q70YC5 407 aa19.29■□□□□ 0.68
SPNS1-204ENST00000352260 SRRM1Q8IYB3 904 aaKnown RBP19.29■□□□□ 0.68
SPNS1-204ENST00000352260 PPFIBP2Q8ND30 876 aa19.29■□□□□ 0.68
SPNS1-204ENST00000352260 MAML1Q92585 1016 aa19.29■□□□□ 0.68
SPNS1-204ENST00000352260 HSPH1Q92598 858 aa19.29■□□□□ 0.68
SPNS1-204ENST00000352260 HAUS1Q96CS2 278 aa19.29■□□□□ 0.68
SPNS1-204ENST00000352260 SENP8Q96LD8 212 aa19.29■□□□□ 0.68
SPNS1-204ENST00000352260 CFAP57Q96MR6 1250 aa19.29■□□□□ 0.68
SPNS1-204ENST00000352260 CYLDQ9NQC7 956 aa19.29■□□□□ 0.68
SPNS1-204ENST00000352260 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.29■□□□□ 0.68
SPNS1-204ENST00000352260 CCDC22O60826 627 aa19.29■□□□□ 0.68
SPNS1-204ENST00000352260 ACAT1P24752 427 aaKnown RBP19.29■□□□□ 0.68
SPNS1-204ENST00000352260 EPHB2P29323 1055 aa19.29■□□□□ 0.68
SPNS1-204ENST00000352260 CLCNKBP51801 687 aa19.29■□□□□ 0.68
SPNS1-204ENST00000352260 WDR4P57081 412 aaKnown RBP19.29■□□□□ 0.68
SPNS1-204ENST00000352260 SLC34A1Q06495 639 aa19.29■□□□□ 0.68
SPNS1-204ENST00000352260 CDO1Q16878 200 aa19.29■□□□□ 0.68
SPNS1-204ENST00000352260 CCDC142Q17RM4 750 aa19.29■□□□□ 0.68
SPNS1-204ENST00000352260 KCTD6Q8NC69 237 aa19.29■□□□□ 0.68
SPNS1-204ENST00000352260 FAM81AQ8TBF8 368 aa19.29■□□□□ 0.68
SPNS1-204ENST00000352260 PTPRN2Q92932 1015 aa19.29■□□□□ 0.68
SPNS1-204ENST00000352260 VCX3BQ9H321 246 aa19.29■□□□□ 0.68
SPNS1-204ENST00000352260 VCX3AQ9NNX9 186 aa19.29■□□□□ 0.68
SPNS1-204ENST00000352260 MLXIPLQ9NP71 852 aa19.29■□□□□ 0.68
SPNS1-204ENST00000352260 SSU72Q9NP77 194 aaKnown RBP19.29■□□□□ 0.68
SPNS1-204ENST00000352260 ZNF212Q9UDV6 495 aa19.29■□□□□ 0.68
SPNS1-204ENST00000352260 RASA4BC9J798 803 aa19.28■□□□□ 0.68
SPNS1-204ENST00000352260 RASA4O43374 803 aa19.28■□□□□ 0.68
SPNS1-204ENST00000352260 PTPN1P18031 435 aaKnown RBP19.28■□□□□ 0.68
SPNS1-204ENST00000352260 KLRC2P26717 231 aa19.28■□□□□ 0.68
SPNS1-204ENST00000352260 ADCY8P40145 1251 aa19.28■□□□□ 0.68
SPNS1-204ENST00000352260 VPS41P49754 854 aa19.28■□□□□ 0.68
SPNS1-204ENST00000352260 VCPP55072 806 aaKnown RBP19.28■□□□□ 0.68
SPNS1-204ENST00000352260 AP1B1Q10567 949 aa19.28■□□□□ 0.68
SPNS1-204ENST00000352260 BBS12Q6ZW61 710 aa19.28■□□□□ 0.68
SPNS1-204ENST00000352260 CTU1Q7Z7A3 348 aaKnown RBP19.28■□□□□ 0.68
SPNS1-204ENST00000352260 RNF169Q8NCN4 708 aa19.28■□□□□ 0.68
SPNS1-204ENST00000352260 B4GALNT2Q8NHY0 566 aa19.28■□□□□ 0.68
SPNS1-204ENST00000352260 PXYLP1Q8TE99 480 aa19.28■□□□□ 0.68
SPNS1-204ENST00000352260 CLEC4CQ8WTT0 213 aa19.28■□□□□ 0.68
SPNS1-204ENST00000352260 NCSTNQ92542 709 aa19.28■□□□□ 0.68
SPNS1-204ENST00000352260 GATA6Q92908 595 aa19.28■□□□□ 0.68
SPNS1-204ENST00000352260 HNRNPABQ99729 332 aaKnown RBP19.28■□□□□ 0.68
SPNS1-204ENST00000352260 EPAS1Q99814 870 aa19.28■□□□□ 0.68
SPNS1-204ENST00000352260 DRG1Q9Y295 367 aaKnown RBP19.28■□□□□ 0.68
SPNS1-204ENST00000352260 TRIM17Q9Y577 477 aa19.28■□□□□ 0.68
SPNS1-204ENST00000352260 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.28■□□□□ 0.68
SPNS1-204ENST00000352260 LCP1P13796 627 aa19.27■□□□□ 0.68
SPNS1-204ENST00000352260 SDC4P31431 198 aa19.27■□□□□ 0.68
SPNS1-204ENST00000352260 CHKAP35790 457 aa19.27■□□□□ 0.68
SPNS1-204ENST00000352260 ACADSBP45954 432 aa19.27■□□□□ 0.68
SPNS1-204ENST00000352260 ITGA8P53708 1063 aa19.27■□□□□ 0.68
SPNS1-204ENST00000352260 DYNLT1P63172 113 aa19.27■□□□□ 0.68
SPNS1-204ENST00000352260 OASLQ15646 514 aaKnown RBP19.27■□□□□ 0.68
SPNS1-204ENST00000352260 KYNUQ16719 465 aa19.27■□□□□ 0.68
SPNS1-204ENST00000352260 TBC1D25Q3MII6 688 aa19.27■□□□□ 0.68
SPNS1-204ENST00000352260 KIAA0319Q5VV43 1072 aa19.27■□□□□ 0.68
SPNS1-204ENST00000352260 SNX30Q5VWJ9 437 aa19.27■□□□□ 0.68
SPNS1-204ENST00000352260 FYB2Q5VWT5 728 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms