RNA–Protein interactions for RNA: ENST00000336596.6

EPHA3-201, Transcript of EPH receptor A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA3, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-201ENST00000336596 BEX3Q00994 111 aa7.56□□□□□ -1.2
EPHA3-201ENST00000336596 XRCC4Q13426 336 aa7.56□□□□□ -1.2
EPHA3-201ENST00000336596 NAB1Q13506 487 aa7.56□□□□□ -1.2
EPHA3-201ENST00000336596 SPDYAQ5MJ70 313 aa7.56□□□□□ -1.2
EPHA3-201ENST00000336596 EOGTQ5NDL2 527 aa7.56□□□□□ -1.2
EPHA3-201ENST00000336596 FBXW10Q5XX13 1052 aa7.56□□□□□ -1.2
EPHA3-201ENST00000336596 ACAD10Q6JQN1 1059 aa7.56□□□□□ -1.2
EPHA3-201ENST00000336596 MIB1Q86YT6 1006 aa7.56□□□□□ -1.2
EPHA3-201ENST00000336596 CCDC60Q8IWA6 550 aaPredicted RBP7.56□□□□□ -1.2
EPHA3-201ENST00000336596 CCNYL1Q8N7R7 359 aa7.56□□□□□ -1.2
EPHA3-201ENST00000336596 CEP19Q96LK0 163 aa7.56□□□□□ -1.2
EPHA3-201ENST00000336596 NECTIN4Q96NY8 510 aa7.56□□□□□ -1.2
EPHA3-201ENST00000336596 OSGEPL1Q9H4B0 414 aa7.56□□□□□ -1.2
EPHA3-201ENST00000336596 DNAJC18Q9H819 358 aa7.56□□□□□ -1.2
EPHA3-201ENST00000336596 GID8Q9NWU2 228 aa7.56□□□□□ -1.2
EPHA3-201ENST00000336596 KLHL28Q9NXS3 571 aa7.56□□□□□ -1.2
EPHA3-201ENST00000336596 COL18A1P39060 1754 aa7.56□□□□□ -1.2
EPHA3-201ENST00000336596 GPM6BQ13491 265 aa7.56□□□□□ -1.2
EPHA3-201ENST00000336596 USP10Q14694 798 aaKnown RBP7.56□□□□□ -1.2
EPHA3-201ENST00000336596 TRIP4Q15650 581 aaPredicted RBP7.56□□□□□ -1.2
EPHA3-201ENST00000336596 BRSK2Q8IWQ3 736 aa7.56□□□□□ -1.2
EPHA3-201ENST00000336596 TRIML2Q8N7C3 387 aa7.56□□□□□ -1.2
EPHA3-201ENST00000336596 CMTM5Q96DZ9 223 aa7.56□□□□□ -1.2
EPHA3-201ENST00000336596 CAPS2Q9BXY5 557 aa7.56□□□□□ -1.2
EPHA3-201ENST00000336596 C20orf96Q9NUD7 363 aaPredicted RBP7.56□□□□□ -1.2
EPHA3-201ENST00000336596 GGT7Q9UJ14 662 aa7.56□□□□□ -1.2
EPHA3-201ENST00000336596 ATP8A1Q9Y2Q0 1164 aa7.56□□□□□ -1.2
EPHA3-201ENST00000336596 AP3M1Q9Y2T2 418 aa7.56□□□□□ -1.2
EPHA3-201ENST00000336596 TLL2Q9Y6L7 1015 aa7.56□□□□□ -1.2
EPHA3-201ENST00000336596 A0A0G2JLL6 359 aaPredicted RBP7.56□□□□□ -1.2
EPHA3-201ENST00000336596 TIMM44O43615 452 aa7.56□□□□□ -1.2
EPHA3-201ENST00000336596 FTH1P02794 183 aa7.56□□□□□ -1.2
EPHA3-201ENST00000336596 KRT8P05787 483 aa7.56□□□□□ -1.2
EPHA3-201ENST00000336596 YBX3P16989 372 aaKnown RBP eCLIP7.56□□□□□ -1.2
EPHA3-201ENST00000336596 RTP1P59025 263 aa7.56□□□□□ -1.2
EPHA3-201ENST00000336596 ZNF268Q14587 947 aaPredicted RBP7.56□□□□□ -1.2
EPHA3-201ENST00000336596 ZNHIT3Q15649 155 aaPredicted RBP7.56□□□□□ -1.2
EPHA3-201ENST00000336596 ZC3H12BQ5HYM0 836 aaKnown RBP7.56□□□□□ -1.2
EPHA3-201ENST00000336596 ATAD3BQ5T9A4 648 aa7.56□□□□□ -1.2
EPHA3-201ENST00000336596 CXCL17Q6UXB2 119 aa7.56□□□□□ -1.2
EPHA3-201ENST00000336596 PRRT2Q7Z6L0 340 aaPredicted RBP7.56□□□□□ -1.2
EPHA3-201ENST00000336596 SERPINB12Q96P63 405 aa7.56□□□□□ -1.2
EPHA3-201ENST00000336596 ATP13A3Q9H7F0 1226 aa7.56□□□□□ -1.2
EPHA3-201ENST00000336596 HHATLQ9HCP6 504 aa7.56□□□□□ -1.2
EPHA3-201ENST00000336596 PDE11AQ9HCR9 933 aa7.56□□□□□ -1.2
EPHA3-201ENST00000336596 UBIAD1Q9Y5Z9 338 aa7.56□□□□□ -1.2
EPHA3-201ENST00000336596 NUP98P52948 1817 aa7.55□□□□□ -1.2
EPHA3-201ENST00000336596 EML1O00423 815 aa7.55□□□□□ -1.2
EPHA3-201ENST00000336596 PHF2O75151 1096 aa7.55□□□□□ -1.2
EPHA3-201ENST00000336596 MAFO75444 373 aaPredicted RBP7.55□□□□□ -1.2
EPHA3-201ENST00000336596 PIM1P11309 404 aaPredicted RBP7.55□□□□□ -1.2
EPHA3-201ENST00000336596 SLC8A1P32418 973 aa7.55□□□□□ -1.2
EPHA3-201ENST00000336596 ARSEP51690 589 aa7.55□□□□□ -1.2
EPHA3-201ENST00000336596 CCL23P55773 120 aa7.55□□□□□ -1.2
EPHA3-201ENST00000336596 SKOR1P84550 965 aa7.55□□□□□ -1.2
EPHA3-201ENST00000336596 GAD2Q05329 585 aa7.55□□□□□ -1.2
EPHA3-201ENST00000336596 RGS1Q08116 209 aa7.55□□□□□ -1.2
EPHA3-201ENST00000336596 COLEC12Q5KU26 742 aa7.55□□□□□ -1.2
EPHA3-201ENST00000336596 PLPP4Q5VZY2 271 aa7.55□□□□□ -1.2
EPHA3-201ENST00000336596 TPGS2Q68CL5 300 aa7.55□□□□□ -1.2
EPHA3-201ENST00000336596 FBXO46Q6PJ61 603 aaPredicted RBP7.55□□□□□ -1.2
EPHA3-201ENST00000336596 TMCO5AQ8N6Q1 288 aa7.55□□□□□ -1.2
EPHA3-201ENST00000336596 PPM1NQ8N819 430 aa7.55□□□□□ -1.2
EPHA3-201ENST00000336596 PCYOX1LQ8NBM8 494 aa7.55□□□□□ -1.2
EPHA3-201ENST00000336596 COPS5Q92905 334 aa7.55□□□□□ -1.2
EPHA3-201ENST00000336596 HAPLN3Q96S86 360 aa7.55□□□□□ -1.2
EPHA3-201ENST00000336596 SYBUQ9NX95 663 aa7.55□□□□□ -1.2
EPHA3-201ENST00000336596 NDOR1Q9UHB4 597 aa7.55□□□□□ -1.2
EPHA3-201ENST00000336596 CAPN11Q9UMQ6 739 aa7.55□□□□□ -1.2
EPHA3-201ENST00000336596 FAF1Q9UNN5 650 aaPredicted RBP7.55□□□□□ -1.2
EPHA3-201ENST00000336596 C2CD2Q9Y426 696 aa7.55□□□□□ -1.2
EPHA3-201ENST00000336596 COL22A1Q8NFW1 1626 aaPredicted RBP7.55□□□□□ -1.2
EPHA3-201ENST00000336596 CBX4O00257 560 aa7.55□□□□□ -1.2
EPHA3-201ENST00000336596 MMP3P08254 477 aa7.55□□□□□ -1.2
EPHA3-201ENST00000336596 PPP2R1BP30154 601 aa7.55□□□□□ -1.2
EPHA3-201ENST00000336596 RPL3P39023 403 aaKnown RBP7.55□□□□□ -1.2
EPHA3-201ENST00000336596 PRKAA2P54646 552 aa7.55□□□□□ -1.2
EPHA3-201ENST00000336596 VSTM1Q6UX27 236 aa7.55□□□□□ -1.2
EPHA3-201ENST00000336596 DLK2Q6UY11 383 aa7.55□□□□□ -1.2
EPHA3-201ENST00000336596 TRMT10CQ7L0Y3 403 aaKnown RBP7.55□□□□□ -1.2
EPHA3-201ENST00000336596 SLC25A41Q8N5S1 370 aa7.55□□□□□ -1.2
EPHA3-201ENST00000336596 TRAPPC12Q8WVT3 735 aa7.55□□□□□ -1.2
EPHA3-201ENST00000336596 MIR1-1HGQ9H1L0 117 aa7.55□□□□□ -1.2
EPHA3-201ENST00000336596 RUBCNLQ9H714 662 aa7.55□□□□□ -1.2
EPHA3-201ENST00000336596 NCDNQ9UBB6 729 aa7.55□□□□□ -1.2
EPHA3-201ENST00000336596 MAFFQ9ULX9 164 aa7.55□□□□□ -1.2
EPHA3-201ENST00000336596 PLIN4Q96Q06 1357 aa7.55□□□□□ -1.2
EPHA3-201ENST00000336596 GLP2RO95838 553 aa7.55□□□□□ -1.2
EPHA3-201ENST00000336596 AKT2P31751 481 aa7.55□□□□□ -1.2
EPHA3-201ENST00000336596 LLGL1Q15334 1064 aa7.55□□□□□ -1.2
EPHA3-201ENST00000336596 MARC1Q5VT66 337 aa7.55□□□□□ -1.2
EPHA3-201ENST00000336596 NUP93Q8N1F7 819 aa7.55□□□□□ -1.2
EPHA3-201ENST00000336596 CAMKK1Q8N5S9 505 aa7.55□□□□□ -1.2
EPHA3-201ENST00000336596 USP33Q8TEY7 942 aa7.55□□□□□ -1.2
EPHA3-201ENST00000336596 RERGQ96A58 199 aaPredicted RBP7.55□□□□□ -1.2
EPHA3-201ENST00000336596 MTMR9Q96QG7 549 aa7.55□□□□□ -1.2
EPHA3-201ENST00000336596 GMLQ99445 158 aa7.55□□□□□ -1.2
EPHA3-201ENST00000336596 GTF3C4Q9UKN8 822 aa7.55□□□□□ -1.2
EPHA3-201ENST00000336596 MRPS33Q9Y291 106 aaKnown RBP7.55□□□□□ -1.2
EPHA3-201ENST00000336596 SOCS7O14512 581 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms