RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 CLCN6P51797 869 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 KCNB1Q14721 858 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 PSMD5Q16401 504 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 CBWD3Q5JTY5 395 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 CBWD5Q5RIA9 395 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 SLC25A25Q6KCM7 469 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 ZNF419Q96HQ0 510 aaPredicted RBP6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 OSBPL8Q9BZF1 889 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 RUBCNLQ9H714 662 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 METTL5Q9NRN9 209 aaKnown RBP6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 SBNO1A3KN83 1393 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 ZGRF1Q86YA3 2104 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 GNG14A0A1W2PPG7 69 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 LCHNA4D1U4 455 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 PENKP01210 267 aaPredicted RBP6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 MYBL1P10243 752 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 PTK2Q05397 1052 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 PLD1Q13393 1074 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 RIPK1Q13546 671 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 GRK1Q15835 563 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 AKR1C8PQ5T2L2 129 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 MPP7Q5T2T1 576 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 COL13A1Q5TAT6 717 aaPredicted RBP6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 LLGL2Q6P1M3 1020 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 FAM171BQ6P995 826 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 LRRC69Q6ZNQ3 347 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 ZNF184Q99676 751 aaPredicted RBP6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 MYRFQ9Y2G1 1151 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 USP15Q9Y4E8 981 aaPredicted RBP6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 GLI2P10070 1586 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 STK36Q9NRP7 1315 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 UBA6A0AVT1 1052 aaPredicted RBP6.21□□□□□ -1.41
CDC42BPA-201ENST00000334218 TMEM114B3SHH9 223 aa6.21□□□□□ -1.41
CDC42BPA-201ENST00000334218 E9PBE3 544 aa6.21□□□□□ -1.41
CDC42BPA-201ENST00000334218 SORBS3O60504 671 aa6.21□□□□□ -1.41
CDC42BPA-201ENST00000334218 AP2A1O95782 977 aa6.21□□□□□ -1.41
CDC42BPA-201ENST00000334218 MAKP20794 623 aa6.21□□□□□ -1.41
CDC42BPA-201ENST00000334218 HNF1AP20823 631 aa6.21□□□□□ -1.41
CDC42BPA-201ENST00000334218 TPD52L3Q96J77 140 aa6.21□□□□□ -1.41
CDC42BPA-201ENST00000334218 PSKH2Q96QS6 385 aa6.21□□□□□ -1.41
CDC42BPA-201ENST00000334218 TMEM120AQ9BXJ8 343 aa6.21□□□□□ -1.41
CDC42BPA-201ENST00000334218 SLC4A5Q9BY07 1137 aa6.21□□□□□ -1.41
CDC42BPA-201ENST00000334218 KIAA1586Q9HCI6 787 aa6.21□□□□□ -1.41
CDC42BPA-201ENST00000334218 CD248Q9HCU0 757 aa6.21□□□□□ -1.41
CDC42BPA-201ENST00000334218 ATP8A2Q9NTI2 1148 aa6.21□□□□□ -1.41
CDC42BPA-201ENST00000334218 TPRKBQ9Y3C4 175 aa6.21□□□□□ -1.41
CDC42BPA-201ENST00000334218 PCDHGB6Q9Y5F9 930 aa6.21□□□□□ -1.41
CDC42BPA-201ENST00000334218 PLEKHG2Q9H7P9 1386 aa6.21□□□□□ -1.41
CDC42BPA-201ENST00000334218 UTYO14607 1347 aa6.21□□□□□ -1.41
CDC42BPA-201ENST00000334218 TMEM94Q12767 1356 aa6.21□□□□□ -1.41
CDC42BPA-201ENST00000334218 USP27XA6NNY8 438 aa6.21□□□□□ -1.41
CDC42BPA-201ENST00000334218 TNPO2O14787 897 aaKnown RBP6.21□□□□□ -1.41
CDC42BPA-201ENST00000334218 PLA2G6O60733 806 aa6.21□□□□□ -1.41
CDC42BPA-201ENST00000334218 ATG13O75143 517 aa6.21□□□□□ -1.41
CDC42BPA-201ENST00000334218 USP12O75317 370 aa6.21□□□□□ -1.41
CDC42BPA-201ENST00000334218 MTA2O94776 668 aa6.21□□□□□ -1.41
CDC42BPA-201ENST00000334218 CRABP2P29373 138 aa6.21□□□□□ -1.41
CDC42BPA-201ENST00000334218 YARSP54577 528 aaKnown RBP6.21□□□□□ -1.41
CDC42BPA-201ENST00000334218 RRM2BQ7LG56 351 aa6.21□□□□□ -1.41
CDC42BPA-201ENST00000334218 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.21□□□□□ -1.41
CDC42BPA-201ENST00000334218 PTCD3Q96EY7 689 aaKnown RBP6.21□□□□□ -1.41
CDC42BPA-201ENST00000334218 NYXQ9GZU5 481 aa6.21□□□□□ -1.41
CDC42BPA-201ENST00000334218 PDGFCQ9NRA1 345 aa6.21□□□□□ -1.41
CDC42BPA-201ENST00000334218 BTG4Q9NY30 223 aa6.21□□□□□ -1.41
CDC42BPA-201ENST00000334218 ZNF112Q9UJU3 913 aa6.21□□□□□ -1.41
CDC42BPA-201ENST00000334218 RTCBQ9Y3I0 505 aaKnown RBP6.21□□□□□ -1.41
CDC42BPA-201ENST00000334218 PIK3C2GO75747 1445 aa6.21□□□□□ -1.41
CDC42BPA-201ENST00000334218 A0A1B0GV72 72 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 NUDT19A8MXV4 375 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 RSL1D1O76021 490 aaKnown RBP6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 HSPA4LO95757 839 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 GRIK1P39086 918 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 KIAA1755Q5JYT7 1200 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 SNX30Q5VWJ9 437 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 C15orf40Q8WUR7 153 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 KLHL6Q8WZ60 621 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 PRCCQ92733 491 aaPredicted RBP6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 FNBP1Q96RU3 617 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 C2orf49Q9BVC5 232 aaPredicted RBP6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 OPA3Q9H6K4 179 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 NSFL1CQ9UNZ2 370 aaKnown RBP6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 C2CD2Q9Y426 696 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 CLIC4Q9Y696 253 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 ARHGEF5Q12774 1597 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 MYO5CQ9NQX4 1742 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 FAM149AA5PLN7 773 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 KRIT1O00522 736 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 PRPF4O43172 522 aaKnown RBP eCLIP6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 IDH1O75874 414 aaKnown RBP6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 ANXA5P08758 320 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 CDK9P50750 372 aaKnown RBP6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 CDH18Q13634 790 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 TMED4Q7Z7H5 227 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 RAB43Q86YS6 212 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 NECTIN2Q92692 538 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 FUZQ9BT04 418 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 DLGAP4Q9Y2H0 992 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 KDM5DQ9BY66 1539 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 SNRNP200O75643 2136 aaKnown RBP6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 MDC1Q14676 2089 aaKnown RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms