RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 GPR149Q86SP6 731 aa8.63□□□□□ -1.03
CHD6-201ENST00000309279 NLRP14Q86W24 1093 aa8.63□□□□□ -1.03
CHD6-201ENST00000309279 SPATA2LQ8IUW3 424 aaPredicted RBP8.63□□□□□ -1.03
CHD6-201ENST00000309279 FAM71AQ8IYT1 594 aa8.63□□□□□ -1.03
CHD6-201ENST00000309279 TTC9BQ8N6N2 239 aa8.63□□□□□ -1.03
CHD6-201ENST00000309279 PLPP7Q8NBV4 271 aa8.63□□□□□ -1.03
CHD6-201ENST00000309279 RBBP8NLQ8NC74 664 aaPredicted RBP8.63□□□□□ -1.03
CHD6-201ENST00000309279 NEK11Q8NG66 645 aa8.63□□□□□ -1.03
CHD6-201ENST00000309279 USP33Q8TEY7 942 aa8.63□□□□□ -1.03
CHD6-201ENST00000309279 LRRN4Q8WUT4 740 aa8.63□□□□□ -1.03
CHD6-201ENST00000309279 ZNF707Q96C28 371 aaPredicted RBP8.63□□□□□ -1.03
CHD6-201ENST00000309279 CYFIP2Q96F07 1278 aa8.63□□□□□ -1.03
CHD6-201ENST00000309279 HIC2Q96JB3 615 aa8.63□□□□□ -1.03
CHD6-201ENST00000309279 HEXIM2Q96MH2 286 aaKnown RBP8.63□□□□□ -1.03
CHD6-201ENST00000309279 DEF6Q9H4E7 631 aa8.63□□□□□ -1.03
CHD6-201ENST00000309279 CSNK1G1Q9HCP0 422 aa8.63□□□□□ -1.03
CHD6-201ENST00000309279 NPDC1Q9NQX5 325 aaPredicted RBP8.63□□□□□ -1.03
CHD6-201ENST00000309279 FAM207AQ9NSI2 230 aaPredicted RBP8.63□□□□□ -1.03
CHD6-201ENST00000309279 ABI2Q9NYB9 513 aaPredicted RBP8.63□□□□□ -1.03
CHD6-201ENST00000309279 NKIRAS2Q9NYR9 191 aa8.63□□□□□ -1.03
CHD6-201ENST00000309279 IFNKQ9P0W0 207 aa8.63□□□□□ -1.03
CHD6-201ENST00000309279 NOSIPQ9Y314 301 aaKnown RBP8.63□□□□□ -1.03
CHD6-201ENST00000309279 ITIH6Q6UXX5 1313 aa8.63□□□□□ -1.03
CHD6-201ENST00000309279 ZNF638Q14966 1978 aaKnown RBP8.63□□□□□ -1.03
CHD6-201ENST00000309279 PLOD2O00469 737 aa8.62□□□□□ -1.03
CHD6-201ENST00000309279 CLDN5O00501 218 aa8.62□□□□□ -1.03
CHD6-201ENST00000309279 RFPL1O75677 317 aa8.62□□□□□ -1.03
CHD6-201ENST00000309279 KCNA5P22460 613 aa8.62□□□□□ -1.03
CHD6-201ENST00000309279 GNA15P30679 374 aa8.62□□□□□ -1.03
CHD6-201ENST00000309279 ATP6V1E1P36543 226 aa8.62□□□□□ -1.03
CHD6-201ENST00000309279 ALDH1A3P47895 512 aa8.62□□□□□ -1.03
CHD6-201ENST00000309279 SEPHS1P49903 392 aa8.62□□□□□ -1.03
CHD6-201ENST00000309279 POLR2FP61218 127 aaKnown RBP8.62□□□□□ -1.03
CHD6-201ENST00000309279 SKOR1P84550 965 aa8.62□□□□□ -1.03
CHD6-201ENST00000309279 TWF1Q12792 350 aa8.62□□□□□ -1.03
CHD6-201ENST00000309279 PLD1Q13393 1074 aa8.62□□□□□ -1.03
CHD6-201ENST00000309279 DRAP1Q14919 205 aaPredicted RBP8.62□□□□□ -1.03
CHD6-201ENST00000309279 ARHGAP44Q17R89 818 aa8.62□□□□□ -1.03
CHD6-201ENST00000309279 MGAT5BQ3V5L5 792 aa8.62□□□□□ -1.03
CHD6-201ENST00000309279 LEXMQ3ZCV2 418 aa8.62□□□□□ -1.03
CHD6-201ENST00000309279 SPDYCQ5MJ68 293 aa8.62□□□□□ -1.03
CHD6-201ENST00000309279 PPP1R26Q5T8A7 1209 aaPredicted RBP8.62□□□□□ -1.03
CHD6-201ENST00000309279 C12orf76Q8N812 135 aaPredicted RBP8.62□□□□□ -1.03
CHD6-201ENST00000309279 SLC2A14Q8TDB8 520 aa8.62□□□□□ -1.03
CHD6-201ENST00000309279 FNIP1Q8TF40 1166 aa8.62□□□□□ -1.03
CHD6-201ENST00000309279 SUSD6Q92537 303 aa8.62□□□□□ -1.03
CHD6-201ENST00000309279 ZSWIM1Q9BR11 485 aa8.62□□□□□ -1.03
CHD6-201ENST00000309279 EDEM3Q9BZQ6 932 aa8.62□□□□□ -1.03
CHD6-201ENST00000309279 ZNF518BQ9C0D4 1074 aa8.62□□□□□ -1.03
CHD6-201ENST00000309279 TTYH3Q9C0H2 523 aa8.62□□□□□ -1.03
CHD6-201ENST00000309279 TMEM30AQ9NV96 361 aa8.62□□□□□ -1.03
CHD6-201ENST00000309279 WDR35Q9P2L0 1181 aa8.62□□□□□ -1.03
CHD6-201ENST00000309279 CD207Q9UJ71 328 aa8.62□□□□□ -1.03
CHD6-201ENST00000309279 DMTF1Q9Y222 760 aa8.62□□□□□ -1.03
CHD6-201ENST00000309279 FAM50BQ9Y247 325 aa8.62□□□□□ -1.03
CHD6-201ENST00000309279 YIPF1Q9Y548 306 aa8.62□□□□□ -1.03
CHD6-201ENST00000309279 ASB3Q9Y575 518 aa8.62□□□□□ -1.03
CHD6-201ENST00000309279 EPN1Q9Y6I3 576 aaPredicted RBP8.62□□□□□ -1.03
CHD6-201ENST00000309279 H3BQ06 376 aaPredicted RBP8.62□□□□□ -1.03
CHD6-201ENST00000309279 O00370 1275 aa8.62□□□□□ -1.03
CHD6-201ENST00000309279 AP5Z1O43299 807 aa8.62□□□□□ -1.03
CHD6-201ENST00000309279 LRG1P02750 347 aa8.62□□□□□ -1.03
CHD6-201ENST00000309279 KRT5P13647 590 aa8.62□□□□□ -1.03
CHD6-201ENST00000309279 CCDC130P13994 396 aa8.62□□□□□ -1.03
CHD6-201ENST00000309279 ATF6P18850 670 aa8.62□□□□□ -1.03
CHD6-201ENST00000309279 CDR1P51861 262 aa8.62□□□□□ -1.03
CHD6-201ENST00000309279 CACNA2D1P54289 1103 aa8.62□□□□□ -1.03
CHD6-201ENST00000309279 RPL10AP62906 217 aaKnown RBP8.62□□□□□ -1.03
CHD6-201ENST00000309279 MPP1Q00013 466 aa8.62□□□□□ -1.03
CHD6-201ENST00000309279 CNGA2Q16280 664 aa8.62□□□□□ -1.03
CHD6-201ENST00000309279 MEA1Q16626 185 aa8.62□□□□□ -1.03
CHD6-201ENST00000309279 PTPN21Q16825 1174 aa8.62□□□□□ -1.03
CHD6-201ENST00000309279 ATP13A4Q4VNC1 1196 aa8.62□□□□□ -1.03
CHD6-201ENST00000309279 PKDCCQ504Y2 493 aa8.62□□□□□ -1.03
CHD6-201ENST00000309279 SGO2Q562F6 1265 aa8.62□□□□□ -1.03
CHD6-201ENST00000309279 CES5AQ6NT32 575 aa8.62□□□□□ -1.03
CHD6-201ENST00000309279 LCLAT1Q6UWP7 414 aa8.62□□□□□ -1.03
CHD6-201ENST00000309279 TMC5Q6UXY8 1006 aa8.62□□□□□ -1.03
CHD6-201ENST00000309279 FAM35AQ86V20 835 aa8.62□□□□□ -1.03
CHD6-201ENST00000309279 LRRC49Q8IUZ0 686 aa8.62□□□□□ -1.03
CHD6-201ENST00000309279 NAT8LQ8N9F0 302 aa8.62□□□□□ -1.03
CHD6-201ENST00000309279 ANKRD52Q8NB46 1076 aa8.62□□□□□ -1.03
CHD6-201ENST00000309279 MSANTD4Q8NCY6 345 aa8.62□□□□□ -1.03
CHD6-201ENST00000309279 ZMIZ2Q8NF64 920 aa8.62□□□□□ -1.03
CHD6-201ENST00000309279 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.62□□□□□ -1.03
CHD6-201ENST00000309279 FEZF2Q8TBJ5 459 aa8.62□□□□□ -1.03
CHD6-201ENST00000309279 ZNF606Q8WXB4 792 aa8.62□□□□□ -1.03
CHD6-201ENST00000309279 TFAP2BQ92481 460 aa8.62□□□□□ -1.03
CHD6-201ENST00000309279 PSMG2Q969U7 264 aa8.62□□□□□ -1.03
CHD6-201ENST00000309279 MFSD3Q96ES6 412 aa8.62□□□□□ -1.03
CHD6-201ENST00000309279 SMARCD1Q96GM5 515 aa8.62□□□□□ -1.03
CHD6-201ENST00000309279 RSRC1Q96IZ7 334 aaKnown RBP8.62□□□□□ -1.03
CHD6-201ENST00000309279 SPATA17Q96L03 361 aa8.62□□□□□ -1.03
CHD6-201ENST00000309279 SEPT5Q99719 369 aaPredicted RBP8.62□□□□□ -1.03
CHD6-201ENST00000309279 NUP58Q9BVL2 599 aa8.62□□□□□ -1.03
CHD6-201ENST00000309279 DUSP16Q9BY84 665 aa8.62□□□□□ -1.03
CHD6-201ENST00000309279 UBXN6Q9BZV1 441 aa8.62□□□□□ -1.03
CHD6-201ENST00000309279 PRDM6Q9NQX0 595 aa8.62□□□□□ -1.03
CHD6-201ENST00000309279 FAM49BQ9NUQ9 324 aa8.62□□□□□ -1.03
CHD6-201ENST00000309279 PSD3Q9NYI0 1048 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms