RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 CCDC153Q494R4 210 aa14.3□□□□□ -0.12
PRKCB-201ENST00000303531 BTBD10Q9BSF8 475 aa14.3□□□□□ -0.12
PRKCB-201ENST00000303531 TIMM13Q9Y5L4 95 aaPredicted RBP14.3□□□□□ -0.12
PRKCB-201ENST00000303531 DLGAP3O95886 979 aa14.3□□□□□ -0.12
PRKCB-201ENST00000303531 GP5P40197 560 aa14.3□□□□□ -0.12
PRKCB-201ENST00000303531 CDH17Q12864 832 aa14.3□□□□□ -0.12
PRKCB-201ENST00000303531 KCNK18Q7Z418 384 aa14.3□□□□□ -0.12
PRKCB-201ENST00000303531 KCNMB4Q86W47 210 aa14.3□□□□□ -0.12
PRKCB-201ENST00000303531 KCTD14Q9BQ13 255 aaPredicted RBP14.3□□□□□ -0.12
PRKCB-201ENST00000303531 H3BRB1 525 aa14.29□□□□□ -0.12
PRKCB-201ENST00000303531 CBX4O00257 560 aa14.29□□□□□ -0.12
PRKCB-201ENST00000303531 EML1O00423 815 aa14.29□□□□□ -0.12
PRKCB-201ENST00000303531 STRNO43815 780 aa14.29□□□□□ -0.12
PRKCB-201ENST00000303531 PGAM1P18669 254 aa14.29□□□□□ -0.12
PRKCB-201ENST00000303531 CD151P48509 253 aa14.29□□□□□ -0.12
PRKCB-201ENST00000303531 ZFP42Q96MM3 310 aa14.29□□□□□ -0.12
PRKCB-201ENST00000303531 TUT1Q9H6E5 874 aaKnown RBP14.29□□□□□ -0.12
PRKCB-201ENST00000303531 SETD4Q9NVD3 440 aa14.29□□□□□ -0.12
PRKCB-201ENST00000303531 CACNA2D2Q9NY47 1150 aa14.29□□□□□ -0.12
PRKCB-201ENST00000303531 RASSF9O75901 435 aa14.29□□□□□ -0.12
PRKCB-201ENST00000303531 CKMP06732 381 aa14.29□□□□□ -0.12
PRKCB-201ENST00000303531 TCHHL1Q5QJ38 904 aaPredicted RBP14.29□□□□□ -0.12
PRKCB-201ENST00000303531 SDE2Q6IQ49 451 aa14.29□□□□□ -0.12
PRKCB-201ENST00000303531 TSEN2Q8NCE0 465 aaKnown RBP14.29□□□□□ -0.12
PRKCB-201ENST00000303531 GJB6O95452 261 aa14.29□□□□□ -0.12
PRKCB-201ENST00000303531 PBLDP30039 288 aaPredicted RBP14.29□□□□□ -0.12
PRKCB-201ENST00000303531 TRAF2Q12933 501 aa14.29□□□□□ -0.12
PRKCB-201ENST00000303531 CCDC103Q8IW40 242 aa14.29□□□□□ -0.12
PRKCB-201ENST00000303531 SYT15Q9BQS2 421 aa14.29□□□□□ -0.12
PRKCB-201ENST00000303531 TMEM106CQ9BVX2 250 aa14.29□□□□□ -0.12
PRKCB-201ENST00000303531 ADGRE3Q9BY15 652 aa14.29□□□□□ -0.12
PRKCB-201ENST00000303531 AMPD1P23109 780 aa14.29□□□□□ -0.12
PRKCB-201ENST00000303531 ACAT1P24752 427 aaKnown RBP14.29□□□□□ -0.12
PRKCB-201ENST00000303531 SCNN1BP51168 640 aa14.29□□□□□ -0.12
PRKCB-201ENST00000303531 FAM9CQ8IZT9 166 aa14.29□□□□□ -0.12
PRKCB-201ENST00000303531 THAP1Q9NVV9 213 aa14.29□□□□□ -0.12
PRKCB-201ENST00000303531 SLC25A13Q9UJS0 675 aa14.29□□□□□ -0.12
PRKCB-201ENST00000303531 GPC1P35052 558 aa14.29□□□□□ -0.12
PRKCB-201ENST00000303531 PRKAA1Q13131 559 aa14.29□□□□□ -0.12
PRKCB-201ENST00000303531 WASHC2DQ5SRD0 308 aa14.29□□□□□ -0.12
PRKCB-201ENST00000303531 ARMC6Q6NXE6 501 aa14.29□□□□□ -0.12
PRKCB-201ENST00000303531 NMD3Q96D46 503 aaKnown RBP14.29□□□□□ -0.12
PRKCB-201ENST00000303531 TSC22D4Q9Y3Q8 395 aa14.29□□□□□ -0.12
PRKCB-201ENST00000303531 PXDNQ92626 1479 aa14.29□□□□□ -0.12
PRKCB-201ENST00000303531 RRM2P31350 389 aa14.29□□□□□ -0.12
PRKCB-201ENST00000303531 TBCELQ5QJ74 424 aa14.29□□□□□ -0.12
PRKCB-201ENST00000303531 CASP10Q92851 521 aa14.29□□□□□ -0.12
PRKCB-201ENST00000303531 SPATC1LQ9H0A9 340 aa14.29□□□□□ -0.12
PRKCB-201ENST00000303531 TRPM5Q9NZQ8 1165 aa14.29□□□□□ -0.12
PRKCB-201ENST00000303531 SAC3D1A6NKF1 404 aa14.28□□□□□ -0.12
PRKCB-201ENST00000303531 SREBF2Q12772 1141 aa14.28□□□□□ -0.12
PRKCB-201ENST00000303531 MARC1Q5VT66 337 aa14.28□□□□□ -0.12
PRKCB-201ENST00000303531 SCUBE3Q8IX30 993 aa14.28□□□□□ -0.12
PRKCB-201ENST00000303531 MRPS31Q92665 395 aaKnown RBP14.28□□□□□ -0.12
PRKCB-201ENST00000303531 AVENQ9NQS1 362 aaPredicted RBP14.28□□□□□ -0.12
PRKCB-201ENST00000303531 CHST7Q9NS84 486 aa14.28□□□□□ -0.12
PRKCB-201ENST00000303531 CTNNAL1Q9UBT7 734 aa14.28□□□□□ -0.12
PRKCB-201ENST00000303531 AKAP5P24588 427 aa14.28□□□□□ -0.12
PRKCB-201ENST00000303531 CCR1P32246 355 aa14.28□□□□□ -0.12
PRKCB-201ENST00000303531 CENPAP49450 140 aa14.28□□□□□ -0.12
PRKCB-201ENST00000303531 CDH8P55286 799 aa14.28□□□□□ -0.12
PRKCB-201ENST00000303531 NR6A1Q15406 480 aa14.28□□□□□ -0.12
PRKCB-201ENST00000303531 B3GALNT2Q8NCR0 500 aa14.28□□□□□ -0.12
PRKCB-201ENST00000303531 ACOX2Q99424 681 aa14.28□□□□□ -0.12
PRKCB-201ENST00000303531 TMEM79Q9BSE2 394 aa14.28□□□□□ -0.12
PRKCB-201ENST00000303531 TNS2Q63HR2 1409 aa14.28□□□□□ -0.12
PRKCB-201ENST00000303531 MGAT4DA6NG13 374 aa14.28□□□□□ -0.12
PRKCB-201ENST00000303531 DSG3P32926 999 aa14.28□□□□□ -0.12
PRKCB-201ENST00000303531 CAMK2GQ13555 558 aaPredicted RBP14.28□□□□□ -0.12
PRKCB-201ENST00000303531 MYLK2Q9H1R3 596 aa14.28□□□□□ -0.12
PRKCB-201ENST00000303531 GNG14A0A1W2PPG7 69 aa14.28□□□□□ -0.12
PRKCB-201ENST00000303531 PRR23AA6NEV1 266 aa14.28□□□□□ -0.12
PRKCB-201ENST00000303531 CCNG1P51959 295 aa14.28□□□□□ -0.12
PRKCB-201ENST00000303531 CES3Q6UWW8 571 aa14.28□□□□□ -0.12
PRKCB-201ENST00000303531 RIPOR1Q6ZS17 1223 aa14.28□□□□□ -0.12
PRKCB-201ENST00000303531 ZDHHC17Q8IUH5 632 aa14.28□□□□□ -0.12
PRKCB-201ENST00000303531 SH3GL1Q99961 368 aa14.28□□□□□ -0.12
PRKCB-201ENST00000303531 TMCC3Q9ULS5 477 aa14.28□□□□□ -0.12
PRKCB-201ENST00000303531 SIK3Q9Y2K2 1263 aa14.28□□□□□ -0.12
PRKCB-201ENST00000303531 SERPINI2O75830 405 aa14.28□□□□□ -0.12
PRKCB-201ENST00000303531 FCGR1AP12314 374 aa14.28□□□□□ -0.12
PRKCB-201ENST00000303531 POU1F1P28069 291 aa14.28□□□□□ -0.12
PRKCB-201ENST00000303531 TMEM132BQ14DG7 1078 aa14.28□□□□□ -0.12
PRKCB-201ENST00000303531 GRIK4Q16099 956 aa14.28□□□□□ -0.12
PRKCB-201ENST00000303531 ZNF75CPQ92670 426 aaPredicted RBP14.28□□□□□ -0.12
PRKCB-201ENST00000303531 SMAD5Q99717 465 aaKnown RBP14.28□□□□□ -0.12
PRKCB-201ENST00000303531 SPTLC1O15269 473 aa14.28□□□□□ -0.12
PRKCB-201ENST00000303531 PDE5AO76074 875 aa14.28□□□□□ -0.12
PRKCB-201ENST00000303531 TRAF7Q6Q0C0 670 aa14.28□□□□□ -0.12
PRKCB-201ENST00000303531 GANQ9H2C0 597 aa14.28□□□□□ -0.12
PRKCB-201ENST00000303531 ELOVL6Q9H5J4 265 aa14.28□□□□□ -0.12
PRKCB-201ENST00000303531 TOMM70O94826 608 aa14.28□□□□□ -0.12
PRKCB-201ENST00000303531 TGFB3P10600 412 aa14.28□□□□□ -0.12
PRKCB-201ENST00000303531 CCDC15Q0P6D6 951 aa14.28□□□□□ -0.12
PRKCB-201ENST00000303531 FAAP100Q0VG06 881 aa14.28□□□□□ -0.12
PRKCB-201ENST00000303531 SPANXN3Q5MJ09 141 aa14.28□□□□□ -0.12
PRKCB-201ENST00000303531 ERAP2Q6P179 960 aa14.28□□□□□ -0.12
PRKCB-201ENST00000303531 SH3RF1Q7Z6J0 888 aa14.28□□□□□ -0.12
PRKCB-201ENST00000303531 TFAP2DQ7Z6R9 452 aa14.28□□□□□ -0.12
PRKCB-201ENST00000303531 ZBTB10Q96DT7 871 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms