RNA–Protein interactions for RNA: ENSMUST00000202769.1

Trim54-202, Transcript of Tripartite motif-containing protein 54, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Trim54, Length 1,408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54-202ENSMUST00000202769 TshrP47750 764 aa17.13■□□□□ 0.33
Trim54-202ENSMUST00000202769 YwhazP63101 245 aaKnown RBP17.13■□□□□ 0.33
Trim54-202ENSMUST00000202769 AxlQ00993 888 aa17.13■□□□□ 0.33
Trim54-202ENSMUST00000202769 Tmem26Q3UP23 366 aa17.13■□□□□ 0.33
Trim54-202ENSMUST00000202769 Tars2Q3UQ84 723 aaKnown RBP17.13■□□□□ 0.33
Trim54-202ENSMUST00000202769 Fam92bQ3V2J0 292 aa17.13■□□□□ 0.33
Trim54-202ENSMUST00000202769 Amer3Q6NS69 780 aa17.13■□□□□ 0.33
Trim54-202ENSMUST00000202769 ManeaQ6NXH2 462 aa17.13■□□□□ 0.33
Trim54-202ENSMUST00000202769 Tdpoz2Q717B2 364 aa17.13■□□□□ 0.33
Trim54-202ENSMUST00000202769 Gm5622Q810Q0 167 aa17.13■□□□□ 0.33
Trim54-202ENSMUST00000202769 Cdh7Q8BM92 785 aa17.13■□□□□ 0.33
Trim54-202ENSMUST00000202769 Klhl20Q8VCK5 604 aa17.13■□□□□ 0.33
Trim54-202ENSMUST00000202769 Alg14Q9D081 217 aa17.13■□□□□ 0.33
Trim54-202ENSMUST00000202769 Nphs1Q9QZS7 1256 aa17.13■□□□□ 0.33
Trim54-202ENSMUST00000202769 Abca4O35600 2310 aa17.12■□□□□ 0.33
Trim54-202ENSMUST00000202769 Gm10719E9Q7T3 227 aa17.12■□□□□ 0.33
Trim54-202ENSMUST00000202769 Sp1O89090 784 aa17.12■□□□□ 0.33
Trim54-202ENSMUST00000202769 Neurog1P70660 244 aa17.12■□□□□ 0.33
Trim54-202ENSMUST00000202769 Klra9Q2TJJ8 266 aa17.12■□□□□ 0.33
Trim54-202ENSMUST00000202769 Ephx3Q3V1F8 367 aa17.12■□□□□ 0.33
Trim54-202ENSMUST00000202769 Papss1Q60967 624 aa17.12■□□□□ 0.33
Trim54-202ENSMUST00000202769 Shc3Q61120 474 aa17.12■□□□□ 0.33
Trim54-202ENSMUST00000202769 Acad11Q80XL6 779 aa17.12■□□□□ 0.33
Trim54-202ENSMUST00000202769 Tmem198bQ8CFU0 350 aa17.12■□□□□ 0.33
Trim54-202ENSMUST00000202769 Cul2Q9D4H8 745 aa17.12■□□□□ 0.33
Trim54-202ENSMUST00000202769 4931423N10RikQ9D4J9 382 aa17.12■□□□□ 0.33
Trim54-202ENSMUST00000202769 Herpud2Q9JJC9 404 aa17.12■□□□□ 0.33
Trim54-202ENSMUST00000202769 Ptgdr2Q9Z2J6 382 aa17.12■□□□□ 0.33
Trim54-202ENSMUST00000202769 Gfpt2Q9Z2Z9 682 aa17.12■□□□□ 0.33
Trim54-202ENSMUST00000202769 Osbpl7A2A716 963 aa17.11■□□□□ 0.33
Trim54-202ENSMUST00000202769 Fam43bA2AM80 330 aa17.11■□□□□ 0.33
Trim54-202ENSMUST00000202769 Gm2956E9PVJ0 216 aa17.11■□□□□ 0.33
Trim54-202ENSMUST00000202769 Gm8108K7N734 216 aa17.11■□□□□ 0.33
Trim54-202ENSMUST00000202769 Ap2a2P17427 938 aaKnown RBP17.11■□□□□ 0.33
Trim54-202ENSMUST00000202769 CstaP56567 97 aa17.11■□□□□ 0.33
Trim54-202ENSMUST00000202769 Usp25P57080 1055 aa17.11■□□□□ 0.33
Trim54-202ENSMUST00000202769 Zbtb48Q1H9T6 681 aa17.11■□□□□ 0.33
Trim54-202ENSMUST00000202769 Naf1Q3UMQ8 489 aa17.11■□□□□ 0.33
Trim54-202ENSMUST00000202769 Krt15Q61414 452 aa17.11■□□□□ 0.33
Trim54-202ENSMUST00000202769 Ccpg1Q640L3 753 aa17.11■□□□□ 0.33
Trim54-202ENSMUST00000202769 Lsm8Q6ZWM4 96 aaKnown RBP17.11■□□□□ 0.33
Trim54-202ENSMUST00000202769 Slc39a4Q78IQ7 660 aa17.11■□□□□ 0.33
Trim54-202ENSMUST00000202769 Apol9bQ8C7I4 310 aa17.11■□□□□ 0.33
Trim54-202ENSMUST00000202769 Mat1aQ91X83 396 aaKnown RBP17.11■□□□□ 0.33
Trim54-202ENSMUST00000202769 SrrtQ99MR6 875 aaKnown RBP17.11■□□□□ 0.33
Trim54-202ENSMUST00000202769 Mzb1Q9D8I1 188 aa17.11■□□□□ 0.33
Trim54-202ENSMUST00000202769 Hacl1Q9QXE0 581 aa17.11■□□□□ 0.33
Trim54-202ENSMUST00000202769 NbnQ9R207 751 aa17.11■□□□□ 0.33
Trim54-202ENSMUST00000202769 FancfE9Q5Z5 343 aa17.1■□□□□ 0.33
Trim54-202ENSMUST00000202769 Gm10378F6XQQ1 160 aa17.1■□□□□ 0.33
Trim54-202ENSMUST00000202769 LipiF6YQT7 476 aa17.1■□□□□ 0.33
Trim54-202ENSMUST00000202769 Srsf5O35326 269 aaKnown RBP17.1■□□□□ 0.33
Trim54-202ENSMUST00000202769 MpoP11247 718 aa17.1■□□□□ 0.33
Trim54-202ENSMUST00000202769 AgtP11859 477 aa17.1■□□□□ 0.33
Trim54-202ENSMUST00000202769 Ptger1P35375 405 aa17.1■□□□□ 0.33
Trim54-202ENSMUST00000202769 LmnaP48678 665 aaKnown RBP17.1■□□□□ 0.33
Trim54-202ENSMUST00000202769 AdkP55264 361 aa17.1■□□□□ 0.33
Trim54-202ENSMUST00000202769 St3gal2Q11204 350 aa17.1■□□□□ 0.33
Trim54-202ENSMUST00000202769 Tmem35bQ3U0Y2 150 aa17.1■□□□□ 0.33
Trim54-202ENSMUST00000202769 Q3UE31 404 aa17.1■□□□□ 0.33
Trim54-202ENSMUST00000202769 KrtdapQ3V2T4 102 aa17.1■□□□□ 0.33
Trim54-202ENSMUST00000202769 PfplQ5RKV8 702 aa17.1■□□□□ 0.33
Trim54-202ENSMUST00000202769 MmeQ61391 750 aa17.1■□□□□ 0.33
Trim54-202ENSMUST00000202769 Myo6Q64331 1265 aa17.1■□□□□ 0.33
Trim54-202ENSMUST00000202769 Tra2aQ6PFR5 281 aaKnown RBP17.1■□□□□ 0.33
Trim54-202ENSMUST00000202769 Zfp397Q7TNK4 527 aa17.1■□□□□ 0.33
Trim54-202ENSMUST00000202769 Ankrd52Q8BTI7 1076 aa17.1■□□□□ 0.33
Trim54-202ENSMUST00000202769 Neto1Q8R4I7 533 aa17.1■□□□□ 0.33
Trim54-202ENSMUST00000202769 Emid1Q91VF5 444 aa17.1■□□□□ 0.33
Trim54-202ENSMUST00000202769 Fam3cQ91VU0 227 aa17.1■□□□□ 0.33
Trim54-202ENSMUST00000202769 Pcdha7Q91Y13 937 aa17.1■□□□□ 0.33
Trim54-202ENSMUST00000202769 Macrod1Q922B1 323 aa17.1■□□□□ 0.33
Trim54-202ENSMUST00000202769 Unc45aQ99KD5 944 aa17.1■□□□□ 0.33
Trim54-202ENSMUST00000202769 Gtpbp4Q99ME9 634 aaKnown RBP17.1■□□□□ 0.33
Trim54-202ENSMUST00000202769 Mageb16Q9CWV4 363 aa17.1■□□□□ 0.33
Trim54-202ENSMUST00000202769 Fbxl12Q9EPX5 326 aa17.1■□□□□ 0.33
Trim54-202ENSMUST00000202769 Znf804aA2AKY4 1200 aa17.09■□□□□ 0.33
Trim54-202ENSMUST00000202769 Kctd18E0CZ26 429 aa17.09■□□□□ 0.33
Trim54-202ENSMUST00000202769 Gm597E9Q8J5 896 aa17.09■□□□□ 0.33
Trim54-202ENSMUST00000202769 Gm2888K7N746 267 aa17.09■□□□□ 0.33
Trim54-202ENSMUST00000202769 Bub1O08901 1058 aa17.09■□□□□ 0.33
Trim54-202ENSMUST00000202769 Cdc25cP48967 447 aa17.09■□□□□ 0.33
Trim54-202ENSMUST00000202769 Cry1P97784 606 aa17.09■□□□□ 0.33
Trim54-202ENSMUST00000202769 Ebf1Q07802 591 aa17.09■□□□□ 0.33
Trim54-202ENSMUST00000202769 Zfp51Q3U4L8 781 aa17.09■□□□□ 0.33
Trim54-202ENSMUST00000202769 Ermp1Q3UVK0 898 aaKnown RBP17.09■□□□□ 0.33
Trim54-202ENSMUST00000202769 Nxpe4Q52KP5 543 aa17.09■□□□□ 0.33
Trim54-202ENSMUST00000202769 NrcamQ810U4 1256 aa17.09■□□□□ 0.33
Trim54-202ENSMUST00000202769 Bnc2Q8BMQ3 1127 aa17.09■□□□□ 0.33
Trim54-202ENSMUST00000202769 Defb22Q8BVC1 179 aa17.09■□□□□ 0.33
Trim54-202ENSMUST00000202769 Trmt10aQ8C1Z8 328 aaKnown RBP17.09■□□□□ 0.33
Trim54-202ENSMUST00000202769 Tram1l1Q8QZR0 363 aa17.09■□□□□ 0.33
Trim54-202ENSMUST00000202769 Pcdhb17Q91VD8 799 aa17.09■□□□□ 0.33
Trim54-202ENSMUST00000202769 Cts3Q91ZD5 332 aa17.09■□□□□ 0.33
Trim54-202ENSMUST00000202769 PigxQ99LV7 254 aa17.09■□□□□ 0.33
Trim54-202ENSMUST00000202769 Dcaf6Q9DC22 876 aa17.09■□□□□ 0.33
Trim54-202ENSMUST00000202769 Tcirg1Q9JHF5 834 aa17.09■□□□□ 0.33
Trim54-202ENSMUST00000202769 Aldh1a3Q9JHW9 512 aa17.09■□□□□ 0.33
Trim54-202ENSMUST00000202769 Ercc4Q9QZD4 917 aa17.09■□□□□ 0.33
Trim54-202ENSMUST00000202769 Trpc2Q9R244 1172 aa17.09■□□□□ 0.33
Retrieved 100 of 22,080 RNA–protein pairs in 32 ms