RNA–Protein interactions for RNA: ENSMUST00000071057.13

Ddx55-201, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx55, Length 2,799 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-201ENSMUST00000071057 Col6a1Q04857 1025 aa11.73□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Igsf9Q05BQ1 1179 aa11.73□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Syne3Q4FZC9 975 aa11.73□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Traf3Q60803 567 aa11.73□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Mapre1Q61166 268 aaKnown RBP11.73□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Birc2Q62210 612 aa11.73□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Phc1Q64028 1012 aa11.73□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Prpf38bQ80SY5 542 aaKnown RBP11.73□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Vmn2r43Q80Z08 845 aa11.73□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Dupd1Q8BK84 215 aa11.73□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Stau2Q8CJ67 570 aaKnown RBP11.73□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Dhx36Q8VHK9 1001 aaKnown RBP11.73□□□□□ -0.53
Ddx55-201ENSMUST00000071057 CtsqQ91ZF4 343 aa11.73□□□□□ -0.53
Ddx55-201ENSMUST00000071057 SncbQ91ZZ3 133 aa11.73□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Mcrs1Q99L90 462 aa11.73□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Pih1d1Q9CQJ2 290 aa11.73□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Tmem174Q9DCX7 243 aa11.73□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Znhit2Q9QY66 399 aa11.73□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Mbtps1Q9WTZ2 1052 aa11.73□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Cntnap5aQ0V8T9 1304 aa11.73□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Gm6657A0A1B0GRJ3 277 aa11.73□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Gm21962L7N280 338 aa11.73□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Casp14O89094 257 aa11.73□□□□□ -0.53
Ddx55-201ENSMUST00000071057 SagP20443 403 aa11.73□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Tbxas1P36423 533 aa11.73□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Ugt3a1Q3UP75 523 aa11.73□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Elf3Q3UPW2 391 aa11.73□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Ifnl2Q4VK74 193 aa11.73□□□□□ -0.53
Ddx55-201ENSMUST00000071057 WlsQ6DID7 541 aa11.73□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Arhgap15Q811M1 481 aa11.73□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Tigd4Q8BUZ3 513 aa11.73□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Aldh5a1Q8BWF0 523 aa11.73□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Wdr27Q8C5V5 780 aa11.73□□□□□ -0.53
Ddx55-201ENSMUST00000071057 GneQ91WG8 722 aaKnown RBP11.73□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Spc24Q9D083 201 aa11.73□□□□□ -0.53
Ddx55-201ENSMUST00000071057 TarsQ9D0R2 722 aaKnown RBP11.73□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Ppil6Q9D6D8 278 aa11.73□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Anxa9Q9JHQ0 345 aa11.73□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Krt16Q9Z2K1 469 aa11.73□□□□□ -0.53
Ddx55-201ENSMUST00000071057 LctF8VPT3 1931 aa11.73□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Tmem131O70472 1877 aa11.72□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Mindy4b-psA0A1W2P7H6 457 aa11.72□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Patl2A2ARM1 529 aa11.72□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Gm4302E9PX25 294 aa11.72□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Edil3O35474 480 aa11.72□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Cops2P61202 443 aaKnown RBP11.72□□□□□ -0.53
Ddx55-201ENSMUST00000071057 StilQ60988 1262 aa11.72□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Foxn1Q61575 648 aa11.72□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Scgb2b2Q6UGQ3 114 aa11.72□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Mrgprb8Q7TN51 330 aa11.72□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Dnali1Q8BVN8 258 aa11.72□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Slf1Q8R3P9 1054 aa11.72□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Kiaa2013Q91X21 634 aa11.72□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Nek8Q91ZR4 698 aa11.72□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Xpo6Q924Z6 1125 aa11.72□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Cox16Q9CR63 106 aa11.72□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Abcg8Q9DBM0 673 aa11.72□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Gm42715A0A087WP63 3095 aaKnown RBP11.72□□□□□ -0.53
Ddx55-201ENSMUST00000071057 ZxdbA2CE44 873 aa11.72□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Slc4a9E9PUP3 929 aa11.72□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Zfp715G3X9T1 886 aa11.72□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Capn6O35646 641 aa11.72□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Hdac3O88895 424 aa11.72□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Rab20P35295 233 aa11.72□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Oaz1P54369 227 aa11.72□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Cfhr2Q4LDF6 332 aa11.72□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Rab34Q64008 259 aa11.72□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Krt12Q64291 487 aa11.72□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Scube3Q66PY1 993 aa11.72□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Pcdhga7Q6DD96 935 aa11.72□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Gja6Q6S5G4 283 aa11.72□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Ankzf1Q80UU1 748 aaKnown RBP11.72□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Cplx4Q80WM3 160 aa11.72□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Als2cr12Q8BVM7 383 aa11.72□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Galnt5Q8C102 930 aa11.72□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Ints9Q8K114 658 aaKnown RBP11.72□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Alas1Q8VC19 642 aa11.72□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Akr1c14Q91WT7 323 aa11.72□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Cntnap4Q99P47 1310 aa11.72□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Cacng4Q9JJV4 327 aa11.72□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Msgn1Q9JK54 188 aa11.72□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Dbn1Q9QXS6 706 aa11.72□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Ripk3Q9QZL0 486 aa11.72□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Pdcd7Q9WTY1 482 aa11.72□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Entpd5Q9WUZ9 427 aa11.72□□□□□ -0.53
Ddx55-201ENSMUST00000071057 TfgQ9Z1A1 397 aa11.72□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Krt27Q9Z320 448 aa11.72□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Acp4D3YTS9 425 aa11.71□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Trim5E9PV98 497 aa11.71□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Kcnk16G5E845 292 aa11.71□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Nek2O35942 443 aa11.71□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Lmo2P25801 158 aa11.71□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Kcnn2P58390 839 aa11.71□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Gabrb2P63137 512 aa11.71□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Cd300lgQ1ERP8 331 aa11.71□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Repin1Q5U4E2 545 aa11.71□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Bcar1Q61140 874 aa11.71□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Znf185Q62394 352 aa11.71□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Adat2Q6P6J0 191 aa11.71□□□□□ -0.53
Ddx55-201ENSMUST00000071057 Prl3a1Q78Y73 227 aa11.71□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 27.4 ms