RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Ssx2ipQ8VC66 615 aa17.39■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Pcdhb10Q91VE5 797 aa17.39■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Pcdha9Q91Y11 979 aa17.39■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Zfp946F6VWU8 523 aa17.39■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Dlx2P40764 332 aa17.39■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Chrna5Q2MKA5 467 aa17.39■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Wbp11Q923D5 641 aaKnown RBP17.39■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Dpp3Q99KK7 738 aa17.39■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Tmem79Q9D709 391 aa17.39■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Per2O54943 1257 aa17.39■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Meaf6Q2VPQ9 191 aa17.39■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Pld5Q3UNN8 536 aa17.39■□□□□ 0.37
Ctcf-201ENSMUST00000005841 CcnhQ61458 323 aa17.39■□□□□ 0.37
Ctcf-201ENSMUST00000005841 LnpepQ8C129 1025 aa17.39■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Tmem132cQ8CEF9 1099 aa17.39■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Itgbl1Q8VDV0 494 aa17.39■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Dctn2Q99KJ8 402 aa17.39■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Map3k20Q9ESL4 802 aaKnown RBP17.39■□□□□ 0.37
Ctcf-201ENSMUST00000005841 IkQ9Z1M8 557 aaKnown RBP17.39■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Gm4847G3X946 537 aa17.38■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Klf6O08584 283 aa17.38■□□□□ 0.37
Ctcf-201ENSMUST00000005841 P3h1Q3V1T4 739 aa17.38■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Nr1h2Q60644 446 aa17.38■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Atp2c1Q80XR2 918 aa17.38■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Ints6lQ8BND4 861 aa17.38■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Zfp62Q8C827 914 aa17.38■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Map4k3Q99JP0 894 aa17.38■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Prpf19Q99KP6 504 aaKnown RBP17.38■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Thap12Q9CUX1 758 aa17.38■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Tubgcp4Q9D4F8 667 aa17.38■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Olfr1305A2AVW3 312 aa17.38■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Ass1P16460 412 aa17.38■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Slc1a2P43006 572 aa17.38■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Arhgef18Q6P9R4 1021 aa17.38■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Usp37Q8C0R0 979 aa17.38■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Rfx6Q8C7R7 927 aa17.38■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Zc3h4Q6ZPZ3 1304 aaKnown RBP17.38■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Gm10436L7N1Y3 520 aa17.38■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Glb1P23780 647 aa17.38■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Sh3tc2Q80VA5 1289 aa17.38■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Ago2Q8CJG0 860 aaKnown RBP17.38■□□□□ 0.37
Ctcf-201ENSMUST00000005841 UvragQ8K245 698 aa17.38■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Armcx6Q8K3A6 301 aa17.38■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Pcdhb6Q91XZ4 772 aa17.38■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Arpc2Q9CVB6 300 aa17.38■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Rgs1Q9JL25 209 aa17.38■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Ap1m2Q9WVP1 423 aa17.38■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Nr1h3Q9Z0Y9 445 aa17.38■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Cd151O35566 253 aa17.37■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Kcng4Q80XM3 506 aa17.37■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Slc18a2Q8BRU6 517 aa17.37■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Trub1Q8C0D0 338 aaKnown RBP17.37■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Asb14Q8C6Y6 587 aa17.37■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Srfbp1Q9CZ91 441 aaKnown RBP17.37■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Gm12394A2AKP6 982 aa17.37■□□□□ 0.37
Ctcf-201ENSMUST00000005841 GabreA2AMW3 916 aa17.37■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Olfr1160A2AVT0 319 aa17.37■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Gm10801F7C7Q0 168 aa17.37■□□□□ 0.37
Ctcf-201ENSMUST00000005841 CnpP16330 420 aa17.37■□□□□ 0.37
Ctcf-201ENSMUST00000005841 BrafP28028 804 aa17.37■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Atxn10P28658 475 aa17.37■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Adrbk2Q3UYH7 688 aa17.37■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Efr3bQ6ZQ18 817 aa17.37■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Slc17a6Q8BLE7 582 aa17.37■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Trib2Q8K4K3 343 aa17.37■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Trps1Q925H1 1281 aa17.37■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Gm29133A0A1B0GT72 266 aa17.37■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Skint1A7TZE6 364 aa17.37■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Nlrp12E9Q5R7 1054 aa17.37■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Gm21738J3QP72 227 aa17.37■□□□□ 0.37
Ctcf-201ENSMUST00000005841 OmdO35103 423 aa17.37■□□□□ 0.37
Ctcf-201ENSMUST00000005841 HmgcrQ01237 887 aa17.37■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Gm1604bQ3TRG0 118 aa17.37■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Clec7aQ6QLQ4 244 aa17.37■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Znf18Q810A1 556 aa17.37■□□□□ 0.37
Ctcf-201ENSMUST00000005841 TiparpQ8C1B2 657 aa17.37■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Mcoln2Q8K595 566 aa17.37■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Fip1l1Q9D824 581 aaKnown RBP17.37■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Aqp4P55088 323 aa17.36■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Fermt1P59113 677 aa17.36■□□□□ 0.37
Ctcf-201ENSMUST00000005841 YwhagP61982 247 aaKnown RBP17.36■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Akap14Q3V0I7 536 aa17.36■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Mfn1Q811U4 741 aa17.36■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Tcaf1Q8BNE1 924 aa17.36■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Ddx18Q8K363 660 aaKnown RBP17.36■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Gins2Q9D600 185 aa17.36■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Bace2Q9JL18 514 aa17.36■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Tmem245B1AZA5 876 aa17.36■□□□□ 0.37
Ctcf-201ENSMUST00000005841 AmacrO09174 381 aa17.36■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Syngr1O55100 234 aa17.36■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Rasgrf1P27671 1262 aa17.36■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Stmn1P54227 149 aaKnown RBP17.36■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Gja5Q01231 358 aa17.36■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Atg4cQ811C2 458 aa17.36■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Qsox1Q8BND5 748 aa17.36■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Clip4Q8CI96 704 aa17.36■□□□□ 0.37
Ctcf-201ENSMUST00000005841 St5Q924W7 1134 aa17.36■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Dph6Q9CQ28 267 aa17.36■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Bcas2Q9D287 225 aa17.36■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Il18rapQ9Z2B1 614 aa17.36■□□□□ 0.37
Retrieved 100 of 22,080 RNA–protein pairs in 16.9 ms