RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 OXCT2Q9BYC2 517 aaPredicted RBP18.29■□□□□ 0.52
PHGDH-232ENST00000641947 C10orf88Q9H8K7 445 aa18.29■□□□□ 0.52
PHGDH-232ENST00000641947 FAM204AQ9H8W3 233 aa18.29■□□□□ 0.52
PHGDH-232ENST00000641947 HOMER3Q9NSC5 361 aa18.29■□□□□ 0.52
PHGDH-232ENST00000641947 DDIT4Q9NX09 232 aa18.29■□□□□ 0.52
PHGDH-232ENST00000641947 SPG21Q9NZD8 308 aa18.29■□□□□ 0.52
PHGDH-232ENST00000641947 GRHL1Q9NZI5 618 aa18.29■□□□□ 0.52
PHGDH-232ENST00000641947 SCML2Q9UQR0 700 aa18.29■□□□□ 0.52
PHGDH-232ENST00000641947 SNX24Q9Y343 169 aa18.29■□□□□ 0.52
PHGDH-232ENST00000641947 UTP11Q9Y3A2 253 aaKnown RBP18.29■□□□□ 0.52
PHGDH-232ENST00000641947 ANAPC1Q9H1A4 1944 aa18.28■□□□□ 0.52
PHGDH-232ENST00000641947 GLUD2P49448 558 aa18.28■□□□□ 0.52
PHGDH-232ENST00000641947 BYSLQ13895 437 aaKnown RBP18.28■□□□□ 0.52
PHGDH-232ENST00000641947 DRICH1Q6PGQ1 229 aaPredicted RBP18.28■□□□□ 0.52
PHGDH-232ENST00000641947 BEND5Q7L4P6 421 aa18.28■□□□□ 0.52
PHGDH-232ENST00000641947 CCDC114Q96M63 670 aa18.28■□□□□ 0.52
PHGDH-232ENST00000641947 ZNF670Q9BS34 389 aa18.28■□□□□ 0.52
PHGDH-232ENST00000641947 RAB17Q9H0T7 212 aa18.28■□□□□ 0.52
PHGDH-232ENST00000641947 CWC15Q9P013 229 aaKnown RBP18.28■□□□□ 0.52
PHGDH-232ENST00000641947 GMIPQ9P107 970 aa18.28■□□□□ 0.52
PHGDH-232ENST00000641947 NUDT5Q9UKK9 219 aa18.28■□□□□ 0.52
PHGDH-232ENST00000641947 OBSL1O75147 1896 aa18.28■□□□□ 0.52
PHGDH-232ENST00000641947 FAM92AA1XBS5 289 aa18.27■□□□□ 0.52
PHGDH-232ENST00000641947 APOC4-APOC2K7ER74 178 aa18.27■□□□□ 0.52
PHGDH-232ENST00000641947 SEC24AO95486 1093 aa18.27■□□□□ 0.52
PHGDH-232ENST00000641947 APOC2P02655 101 aa18.27■□□□□ 0.52
PHGDH-232ENST00000641947 GOT1P17174 413 aa18.27■□□□□ 0.52
PHGDH-232ENST00000641947 VCPP55072 806 aaKnown RBP18.27■□□□□ 0.52
PHGDH-232ENST00000641947 SMARCB1Q12824 385 aa18.27■□□□□ 0.52
PHGDH-232ENST00000641947 CUL1Q13616 776 aa18.27■□□□□ 0.52
PHGDH-232ENST00000641947 TRIP13Q15645 432 aaPredicted RBP18.27■□□□□ 0.52
PHGDH-232ENST00000641947 SLC9A4Q6AI14 798 aa18.27■□□□□ 0.52
PHGDH-232ENST00000641947 KIAA1841Q6NSI8 718 aa18.27■□□□□ 0.52
PHGDH-232ENST00000641947 ZDHHC24Q6UX98 284 aa18.27■□□□□ 0.52
PHGDH-232ENST00000641947 DDX53Q86TM3 631 aaKnown RBP18.27■□□□□ 0.52
PHGDH-232ENST00000641947 VSIG1Q86XK7 387 aa18.27■□□□□ 0.52
PHGDH-232ENST00000641947 ATL2Q8NHH9 583 aa18.27■□□□□ 0.52
PHGDH-232ENST00000641947 C2orf15Q8WU43 125 aaKnown RBP18.27■□□□□ 0.52
PHGDH-232ENST00000641947 NKD2Q969F2 451 aaPredicted RBP18.27■□□□□ 0.52
PHGDH-232ENST00000641947 ZDHHC18Q9NUE0 388 aa18.27■□□□□ 0.52
PHGDH-232ENST00000641947 MFHAS1Q9Y4C4 1052 aa18.27■□□□□ 0.52
PHGDH-232ENST00000641947 LCHNA4D1U4 455 aa18.27■□□□□ 0.51
PHGDH-232ENST00000641947 FAM72CH0Y354 149 aa18.27■□□□□ 0.51
PHGDH-232ENST00000641947 TP73O15350 636 aa18.27■□□□□ 0.51
PHGDH-232ENST00000641947 CXCR3P49682 368 aa18.27■□□□□ 0.51
PHGDH-232ENST00000641947 PTK6Q13882 451 aa18.27■□□□□ 0.51
PHGDH-232ENST00000641947 FAM72AQ5TYM5 149 aa18.27■□□□□ 0.51
PHGDH-232ENST00000641947 BTBD8Q5XKL5 378 aa18.27■□□□□ 0.51
PHGDH-232ENST00000641947 FAM72DQ6L9T8 149 aa18.27■□□□□ 0.51
PHGDH-232ENST00000641947 DENND5BQ6ZUT9 1274 aa18.27■□□□□ 0.51
PHGDH-232ENST00000641947 FAM72BQ86X60 149 aa18.27■□□□□ 0.51
PHGDH-232ENST00000641947 MAP7D3Q8IWC1 876 aa18.27■□□□□ 0.51
PHGDH-232ENST00000641947 GIPC2Q8TF65 315 aa18.27■□□□□ 0.51
PHGDH-232ENST00000641947 CASP10Q92851 521 aa18.27■□□□□ 0.51
PHGDH-232ENST00000641947 SPATA17Q96L03 361 aa18.27■□□□□ 0.51
PHGDH-232ENST00000641947 CSPG4P5Q96PW8 444 aa18.27■□□□□ 0.51
PHGDH-232ENST00000641947 ABCC13Q9NSE7 274 aa18.27■□□□□ 0.51
PHGDH-232ENST00000641947 ETNK2Q9NVF9 386 aa18.27■□□□□ 0.51
PHGDH-232ENST00000641947 RRN3Q9NYV6 651 aa18.27■□□□□ 0.51
PHGDH-232ENST00000641947 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.27■□□□□ 0.51
PHGDH-232ENST00000641947 SFMBT1Q9UHJ3 866 aa18.27■□□□□ 0.51
PHGDH-232ENST00000641947 RASAL2Q9UJF2 1139 aa18.27■□□□□ 0.51
PHGDH-232ENST00000641947 FBXW11Q9UKB1 542 aa18.27■□□□□ 0.51
PHGDH-232ENST00000641947 ZMYND8Q9ULU4 1186 aaPredicted RBP18.27■□□□□ 0.51
PHGDH-232ENST00000641947 ZNF487B1APH4 448 aa18.26■□□□□ 0.51
PHGDH-232ENST00000641947 MSI1O43347 362 aaKnown RBP18.26■□□□□ 0.51
PHGDH-232ENST00000641947 DNAJB2P25686 324 aa18.26■□□□□ 0.51
PHGDH-232ENST00000641947 IVDP26440 423 aa18.26■□□□□ 0.51
PHGDH-232ENST00000641947 ADRA1BP35368 520 aa18.26■□□□□ 0.51
PHGDH-232ENST00000641947 SCAPQ12770 1279 aa18.26■□□□□ 0.51
PHGDH-232ENST00000641947 PPP1R7Q15435 360 aa18.26■□□□□ 0.51
PHGDH-232ENST00000641947 MAP9Q49MG5 647 aa18.26■□□□□ 0.51
PHGDH-232ENST00000641947 B4GALNT4Q76KP1 1039 aa18.26■□□□□ 0.51
PHGDH-232ENST00000641947 SND1Q7KZF4 910 aaKnown RBP eCLIP18.26■□□□□ 0.511e-7■■■■□ 19.4
PHGDH-232ENST00000641947 VPS52Q8N1B4 723 aa18.26■□□□□ 0.51
PHGDH-232ENST00000641947 NTAN1Q96AB6 310 aa18.26■□□□□ 0.51
PHGDH-232ENST00000641947 SLC9A7Q96T83 725 aa18.26■□□□□ 0.51
PHGDH-232ENST00000641947 TMEM121Q9BTD3 319 aa18.26■□□□□ 0.51
PHGDH-232ENST00000641947 FBXO44Q9H4M3 255 aa18.26■□□□□ 0.51
PHGDH-232ENST00000641947 FAM114A2Q9NRY5 505 aa18.26■□□□□ 0.51
PHGDH-232ENST00000641947 SNX10Q9Y5X0 201 aa18.26■□□□□ 0.51
PHGDH-232ENST00000641947 LAMA3Q16787 3333 aa18.26■□□□□ 0.51
PHGDH-232ENST00000641947 NUP205Q92621 2012 aa18.25■□□□□ 0.51
PHGDH-232ENST00000641947 MAP2K7O14733 419 aa18.25■□□□□ 0.51
PHGDH-232ENST00000641947 IRAK2O43187 625 aa18.25■□□□□ 0.51
PHGDH-232ENST00000641947 ABLIM3O94929 683 aa18.25■□□□□ 0.51
PHGDH-232ENST00000641947 MAP3K6O95382 1288 aa18.25■□□□□ 0.51
PHGDH-232ENST00000641947 ETS1P14921 441 aa18.25■□□□□ 0.51
PHGDH-232ENST00000641947 KLRC2P26717 231 aa18.25■□□□□ 0.51
PHGDH-232ENST00000641947 HLTFQ14527 1009 aaKnown RBP eCLIP18.25■□□□□ 0.51
PHGDH-232ENST00000641947 CASP8Q14790 479 aa18.25■□□□□ 0.51
PHGDH-232ENST00000641947 FAM182AQ5T1J6 154 aa18.25■□□□□ 0.51
PHGDH-232ENST00000641947 PSRC1Q6PGN9 363 aaPredicted RBP18.25■□□□□ 0.51
PHGDH-232ENST00000641947 C1orf228Q6PIY5 440 aa18.25■□□□□ 0.51
PHGDH-232ENST00000641947 PSTKQ8IV42 348 aaKnown RBP18.25■□□□□ 0.51
PHGDH-232ENST00000641947 ALLCQ8N6M5 410 aa18.25■□□□□ 0.51
PHGDH-232ENST00000641947 GRK7Q8WTQ7 553 aa18.25■□□□□ 0.51
PHGDH-232ENST00000641947 CAVIN3Q969G5 261 aa18.25■□□□□ 0.51
PHGDH-232ENST00000641947 MAK16Q9BXY0 300 aaKnown RBP18.25■□□□□ 0.51
PHGDH-232ENST00000641947 SMOC2Q9H3U7 446 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms