RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 MMP17Q9ULZ9 603 aa14.45□□□□□ -0.1
PNKP-228ENST00000637325 CNTN6Q9UQ52 1028 aa14.45□□□□□ -0.1
PNKP-228ENST00000637325 CEP250Q9BV73 2442 aa14.45□□□□□ -0.1
PNKP-228ENST00000637325 PI4KAP42356 2102 aa14.44□□□□□ -0.1
PNKP-228ENST00000637325 YJEFN3A6XGL0 299 aa14.44□□□□□ -0.1
PNKP-228ENST00000637325 E7ENQ6 273 aa14.44□□□□□ -0.1
PNKP-228ENST00000637325 THAP12O43422 761 aa14.44□□□□□ -0.1
PNKP-228ENST00000637325 ALDH1A2O94788 518 aa14.44□□□□□ -0.1
PNKP-228ENST00000637325 FBXO21O94952 628 aa14.44□□□□□ -0.1
PNKP-228ENST00000637325 KLKB1P03952 638 aa14.44□□□□□ -0.1
PNKP-228ENST00000637325 GNA15P30679 374 aa14.44□□□□□ -0.1
PNKP-228ENST00000637325 HARS2P49590 506 aaKnown RBP14.44□□□□□ -0.1
PNKP-228ENST00000637325 DAOAP59103 153 aa14.44□□□□□ -0.1
PNKP-228ENST00000637325 MESP2Q0VG99 397 aa14.44□□□□□ -0.1
PNKP-228ENST00000637325 HSF5Q4G112 596 aaPredicted RBP14.44□□□□□ -0.1
PNKP-228ENST00000637325 CT47A1Q5JQC4 288 aaPredicted RBP14.44□□□□□ -0.1
PNKP-228ENST00000637325 EOGTQ5NDL2 527 aa14.44□□□□□ -0.1
PNKP-228ENST00000637325 C10orf76Q5T2E6 689 aa14.44□□□□□ -0.1
PNKP-228ENST00000637325 EMC10Q5UCC4 262 aa14.44□□□□□ -0.1
PNKP-228ENST00000637325 BHLHA9Q7RTU4 235 aa14.44□□□□□ -0.1
PNKP-228ENST00000637325 CACNA2D4Q7Z3S7 1137 aa14.44□□□□□ -0.1
PNKP-228ENST00000637325 TRMT11Q7Z4G4 463 aaKnown RBP14.44□□□□□ -0.1
PNKP-228ENST00000637325 DENND1CQ8IV53 801 aa14.44□□□□□ -0.1
PNKP-228ENST00000637325 SFTPA1Q8IWL2 248 aa14.44□□□□□ -0.1
PNKP-228ENST00000637325 SCML4Q8N228 414 aa14.44□□□□□ -0.1
PNKP-228ENST00000637325 ALLCQ8N6M5 410 aa14.44□□□□□ -0.1
PNKP-228ENST00000637325 TERB1Q8NA31 727 aa14.44□□□□□ -0.1
PNKP-228ENST00000637325 GAB3Q8WWW8 586 aa14.44□□□□□ -0.1
PNKP-228ENST00000637325 IRGQQ8WZA9 623 aa14.44□□□□□ -0.1
PNKP-228ENST00000637325 PLD4Q96BZ4 506 aa14.44□□□□□ -0.1
PNKP-228ENST00000637325 TUBGCP2Q9BSJ2 902 aa14.44□□□□□ -0.1
PNKP-228ENST00000637325 MIS12Q9H081 205 aa14.44□□□□□ -0.1
PNKP-228ENST00000637325 PLK2Q9NYY3 685 aa14.44□□□□□ -0.1
PNKP-228ENST00000637325 APEX2Q9UBZ4 518 aa14.44□□□□□ -0.1
PNKP-228ENST00000637325 USP18Q9UMW8 372 aa14.44□□□□□ -0.1
PNKP-228ENST00000637325 ANTXRLA6NF34 631 aa14.43□□□□□ -0.1
PNKP-228ENST00000637325 CACNG3O60359 315 aa14.43□□□□□ -0.1
PNKP-228ENST00000637325 CYBBP04839 570 aa14.43□□□□□ -0.1
PNKP-228ENST00000637325 RETP07949 1114 aa14.43□□□□□ -0.1
PNKP-228ENST00000637325 PON1P27169 355 aa14.43□□□□□ -0.1
PNKP-228ENST00000637325 ACADSBP45954 432 aa14.43□□□□□ -0.1
PNKP-228ENST00000637325 DGKGP49619 791 aa14.43□□□□□ -0.1
PNKP-228ENST00000637325 VWA3BQ502W6 1294 aa14.43□□□□□ -0.1
PNKP-228ENST00000637325 DENND1BQ6P3S1 775 aa14.43□□□□□ -0.1
PNKP-228ENST00000637325 PHTF2Q8N3S3 785 aa14.43□□□□□ -0.1
PNKP-228ENST00000637325 ZNF513Q8N8E2 541 aaPredicted RBP14.43□□□□□ -0.1
PNKP-228ENST00000637325 GPT2Q8TD30 523 aa14.43□□□□□ -0.1
PNKP-228ENST00000637325 KCNV2Q8TDN2 545 aa14.43□□□□□ -0.1
PNKP-228ENST00000637325 ZNF606Q8WXB4 792 aa14.43□□□□□ -0.1
PNKP-228ENST00000637325 NDST4Q9H3R1 872 aa14.43□□□□□ -0.1
PNKP-228ENST00000637325 POLMQ9NP87 494 aaPredicted RBP14.43□□□□□ -0.1
PNKP-228ENST00000637325 EBF1Q9UH73 591 aa14.43□□□□□ -0.1
PNKP-228ENST00000637325 AGO1Q9UL18 857 aaKnown RBP14.43□□□□□ -0.1
PNKP-228ENST00000637325 HBS1LQ9Y450 684 aaKnown RBP14.43□□□□□ -0.1
PNKP-228ENST00000637325 KCNJ18B7U540 433 aa14.42□□□□□ -0.1
PNKP-228ENST00000637325 TRIM24O15164 1050 aa14.42□□□□□ -0.1
PNKP-228ENST00000637325 LTFP02788 710 aa14.42□□□□□ -0.1
PNKP-228ENST00000637325 GPD2P43304 727 aa14.42□□□□□ -0.1
PNKP-228ENST00000637325 KIR2DL1P43626 348 aaPredicted RBP14.42□□□□□ -0.1
PNKP-228ENST00000637325 APBA1Q02410 837 aa14.42□□□□□ -0.1
PNKP-228ENST00000637325 KCNJ12Q14500 433 aa14.42□□□□□ -0.1
PNKP-228ENST00000637325 TRIP4Q15650 581 aaPredicted RBP14.42□□□□□ -0.1
PNKP-228ENST00000637325 CRY1Q16526 586 aa14.42□□□□□ -0.1
PNKP-228ENST00000637325 SDE2Q6IQ49 451 aa14.42□□□□□ -0.1
PNKP-228ENST00000637325 ANO7Q6IWH7 933 aa14.42□□□□□ -0.1
PNKP-228ENST00000637325 FAM160A2Q8N612 972 aaPredicted RBP14.42□□□□□ -0.1
PNKP-228ENST00000637325 IL17RCQ8NAC3 791 aa14.42□□□□□ -0.1
PNKP-228ENST00000637325 CLEC4CQ8WTT0 213 aa14.42□□□□□ -0.1
PNKP-228ENST00000637325 DDI1Q8WTU0 396 aa14.42□□□□□ -0.1
PNKP-228ENST00000637325 ZDHHC4Q9NPG8 344 aa14.42□□□□□ -0.1
PNKP-228ENST00000637325 BCCIPQ9P287 314 aaKnown RBP eCLIP14.42□□□□□ -0.1
PNKP-228ENST00000637325 DNAJC12Q9UKB3 198 aa14.42□□□□□ -0.1
PNKP-228ENST00000637325 SGK1O00141 431 aa14.41□□□□□ -0.1
PNKP-228ENST00000637325 SART1O43290 800 aaKnown RBP14.41□□□□□ -0.1
PNKP-228ENST00000637325 GABBR2O75899 941 aa14.41□□□□□ -0.1
PNKP-228ENST00000637325 TPM2P07951 284 aa14.41□□□□□ -0.1
PNKP-228ENST00000637325 PTK2Q05397 1052 aa14.41□□□□□ -0.1
PNKP-228ENST00000637325 SPEM2Q0P670 501 aa14.41□□□□□ -0.1
PNKP-228ENST00000637325 USP39Q53GS9 565 aaKnown RBP14.41□□□□□ -0.1
PNKP-228ENST00000637325 SASS6Q6UVJ0 657 aa14.41□□□□□ -0.1
PNKP-228ENST00000637325 TMEM92Q6UXU6 159 aa14.41□□□□□ -0.1
PNKP-228ENST00000637325 SCUBE3Q8IX30 993 aa14.41□□□□□ -0.1
PNKP-228ENST00000637325 PGBD3Q8N328 593 aa14.41□□□□□ -0.1
PNKP-228ENST00000637325 CPXM2Q8N436 756 aa14.41□□□□□ -0.1
PNKP-228ENST00000637325 FAM149B1Q96BN6 582 aa14.41□□□□□ -0.1
PNKP-228ENST00000637325 TPSD1Q9BZJ3 242 aa14.41□□□□□ -0.1
PNKP-228ENST00000637325 ACP6Q9NPH0 428 aa14.41□□□□□ -0.1
PNKP-228ENST00000637325 SAMSN1Q9NSI8 373 aaKnown RBP14.41□□□□□ -0.1
PNKP-228ENST00000637325 NFE2L3Q9Y4A8 694 aa14.41□□□□□ -0.1
PNKP-228ENST00000637325 PLXND1Q9Y4D7 1925 aa14.41□□□□□ -0.1
PNKP-228ENST00000637325 BECN2A8MW95 431 aa14.4□□□□□ -0.1
PNKP-228ENST00000637325 CAPN9O14815 690 aa14.4□□□□□ -0.1
PNKP-228ENST00000637325 ZBTB24O43167 697 aaPredicted RBP14.4□□□□□ -0.1
PNKP-228ENST00000637325 MSI1O43347 362 aaKnown RBP14.4□□□□□ -0.1
PNKP-228ENST00000637325 RHOBTB1O94844 696 aa14.4□□□□□ -0.1
PNKP-228ENST00000637325 CISD3P0C7P0 127 aa14.4□□□□□ -0.1
PNKP-228ENST00000637325 NCAM1P13591 858 aa14.4□□□□□ -0.1
PNKP-228ENST00000637325 EEF1GP26641 437 aaKnown RBP14.4□□□□□ -0.1
PNKP-228ENST00000637325 GBP1P32455 592 aa14.4□□□□□ -0.1
PNKP-228ENST00000637325 WASP42768 502 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms